Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAAGAAAAGGAGATGCAACAATTTTCATCATCGTCTCTGGTTTGATCTTCCTTTGCATTATCTTGGGTGGTTTCCTTCTCTGTTTCTACCTTTTCCTCCCAGAATCACAATCTTCTGATTGGTATCTTATCATTGGGATGGTTTTGGTTTCAACTCCCTGGATATTTTGGTTTTCAATTTATATCTATCATTGCTCGAAACCTACCAAAGTGCAACTCAATTTCTTTGGCTCTAATAGTAATTATAACTCATCTAGTAAAAAGACAGAAATTTCTAATAATAATGAAGTTGATGTTGATGAAGATGAAACCCCTGGTGGAGGCAAACGCAAAGTGCATTTCGGTGCAGTGGTTGTCATGGAAAAACAACCACCATTAGATAGAAATTATAGCCATTCAAAACAACCTACTCCTATATCTCCCAGGAAAACTGAAGTGCCATTGAGATTATCGACCTCGTCGTCTTAGTATACAATATCGGTCGCAAAAAAAATAGCCATTCTCACTCGTTATTTTTGGTAATGTTACTCTTTTTGTCTATGATTTGTTTCTAGCTCTTTTAAAAAATAGATAGACTTTTGCTAGTTGTTTTCTTGTTTCTCATTTCTCACATTTGTTTTTGGAATTGTTATGCAGTACCATATTTCTCTTTGGTAAGAAGAGAAAACGTAAAGACAAGGAACAAGACATTATCAAATGAGCTTTTATTTATCGTGATTCAAAAAGTGATGACATGATACGTTGTGGGGAATAATGCAAATAACAAAATGACGGAGATGCATCCACGGTATTTTGAGATCAAGAAACAAAGGAGGATATAAGTAACAACTAAGATTTGATTTGAGTTTTTTTTCTTTCTTTCTTTCTTTCTT
mRNA sequence
ATGGAAGAAAGAAAAGGAGATGCAACAATTTTCATCATCGTCTCTGGTTTGATCTTCCTTTGCATTATCTTGGGTGGTTTCCTTCTCTGTTTCTACCTTTTCCTCCCAGAATCACAATCTTCTGATTGGTATCTTATCATTGGGATGGTTTTGGTTTCAACTCCCTGGATATTTTGGTTTTCAATTTATATCTATCATTGCTCGAAACCTACCAAAGTGCAACTCAATTTCTTTGGCTCTAATAGTAATTATAACTCATCTAGTAAAAAGACAGAAATTTCTAATAATAATGAAGTTGATGTTGATGAAGATGAAACCCCTGGTGGAGGCAAACGCAAAGTGCATTTCGGTGCAGTGGTTGTCATGGAAAAACAACCACCATTAGATAGAAATTATAGCCATTCAAAACAACCTACTCCTATATCTCCCAGGAAAACTGAAGTGCCATTGAGATTATCGACCTCGTCGTCTTAGTATACAATATCGGTCGCAAAAAAAATAGCCATTCTCACTCGTTATTTTTGTACCATATTTCTCTTTGGTAAGAAGAGAAAACGTAAAGACAAGGAACAAGACATTATCAAATGAGCTTTTATTTATCGTGATTCAAAAAGTGATGACATGATACGTTGTGGGGAATAATGCAAATAACAAAATGACGGAGATGCATCCACGGTATTTTGAGATCAAGAAACAAAGGAGGATATAAGTAACAACTAAGATTTGATTTGAGTTTTTTTTCTTTCTTTCTTTCTTTCTT
Coding sequence (CDS)
ATGGAAGAAAGAAAAGGAGATGCAACAATTTTCATCATCGTCTCTGGTTTGATCTTCCTTTGCATTATCTTGGGTGGTTTCCTTCTCTGTTTCTACCTTTTCCTCCCAGAATCACAATCTTCTGATTGGTATCTTATCATTGGGATGGTTTTGGTTTCAACTCCCTGGATATTTTGGTTTTCAATTTATATCTATCATTGCTCGAAACCTACCAAAGTGCAACTCAATTTCTTTGGCTCTAATAGTAATTATAACTCATCTAGTAAAAAGACAGAAATTTCTAATAATAATGAAGTTGATGTTGATGAAGATGAAACCCCTGGTGGAGGCAAACGCAAAGTGCATTTCGGTGCAGTGGTTGTCATGGAAAAACAACCACCATTAGATAGAAATTATAGCCATTCAAAACAACCTACTCCTATATCTCCCAGGAAAACTGAAGTGCCATTGAGATTATCGACCTCGTCGTCTTAG
Protein sequence
MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWFSIYIYHCSKPTKVQLNFFGSNSNYNSSSKKTEISNNNEVDVDEDETPGGGKRKVHFGAVVVMEKQPPLDRNYSHSKQPTPISPRKTEVPLRLSTSSS
Homology
BLAST of IVF0014902 vs. ExPASy TrEMBL
Match:
A0A0A0LN77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120380 PE=4 SV=1)
HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58
Identity = 128/162 (79.01%), Postives = 135/162 (83.33%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDA I +I+SGLIFLCIILGGFLLC YLFLPESQ+SDWY IG+VLVSTPWIFW
Sbjct: 1 MEERKGDARI-VIISGLIFLCIILGGFLLCLYLFLPESQTSDWYPTIGIVLVSTPWIFWL 60
Query: 61 SIYIYHCSKPTKVQLNFFGSNSNYNSSSKKTEISNNNEVDVDE-----DETPGGGKRKVH 120
S+YIYHC KPTKV LN FGSNS NSSSKKTE S NNE DV E DETPGGGKRKVH
Sbjct: 61 SVYIYHCLKPTKVLLNPFGSNS-INSSSKKTEASKNNEDDVGEDDVGDDETPGGGKRKVH 120
Query: 121 FGAVVVMEKQPPLDRNYSHSKQPTPISPRKTEVPLRLSTSSS 158
FGAV VMEKQP LDRN SHSKQ T SPR+ E+PLRLSTSSS
Sbjct: 121 FGAVFVMEKQPTLDRNSSHSKQSTSTSPREPEMPLRLSTSSS 160
BLAST of IVF0014902 vs. ExPASy TrEMBL
Match:
A0A6J1KKI3 (uncharacterized protein LOC111494867 OS=Cucurbita maxima OX=3661 GN=LOC111494867 PE=4 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31
Identity = 74/140 (52.86%), Postives = 99/140 (70.71%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDATI +I+SGL+FLC++ GG LLC YLF+PES+S DWY ++G++LVSTPWIFWF
Sbjct: 1 MEERKGDATI-LIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWF 60
Query: 61 SIYIYHCSKPTKVQLNF---FGSNSNYNSSSKKTE---ISNNNEVDVDEDETPGGGKRKV 120
+Y+YHC KP ++Q N S+SN S+ ++N +V+ + +TPG GKR+V
Sbjct: 61 LVYLYHCLKPIRLQSNAALKHSSSSNRPPSAANNSGGIVANLPQVESPDCDTPGDGKRRV 120
Query: 121 HFGAVVVMEKQPPLDRNYSH 135
HFGAVVV P + SH
Sbjct: 121 HFGAVVVKGNNPQGGKKSSH 139
BLAST of IVF0014902 vs. ExPASy TrEMBL
Match:
A0A6J1DSP4 (uncharacterized protein LOC111022806 OS=Momordica charantia OX=3673 GN=LOC111022806 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 6.5e-26
Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDA I +I+SG+IFLCII GG LL YL+LP+S+S+DWY I+G+VLV+TPWIFW
Sbjct: 5 MEERKGDARI-LIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWL 64
Query: 61 SIYIYHCSKPT----KVQLNFFGSNSNYNSSSKKTEISNNNEVDVDEDETPGGGKRKVHF 120
+Y+YHC KP + N F S++N + +N + + ++PGGGKR+VHF
Sbjct: 65 LVYLYHCFKPAAQPQPPRFNAFNSSTN-----RAPPAANPSGAESPNCDSPGGGKRRVHF 124
Query: 121 GAVVVMEKQPPLDRNYSHSKQPTPISPRKTEVPLRLSTSSS 158
G + +H K PR++E+PL S SSS
Sbjct: 125 GTTREEGMDSNTNGGNNHEK-----CPRESELPLSPSISSS 154
BLAST of IVF0014902 vs. ExPASy TrEMBL
Match:
A0A6P4AHG6 (uncharacterized protein LOC107429042 OS=Ziziphus jujuba OX=326968 GN=LOC107429042 PE=4 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 5.3e-20
Identity = 78/182 (42.86%), Postives = 100/182 (54.95%), Query Frame = 0
Query: 3 ERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWFSI 62
ER+ DA I+ IVS L FLCII GG L Y+FLPESQS+DWY I+GMVLV+ PW FWF
Sbjct: 6 ERQRDARIY-IVSILFFLCIISGGIFLGLYIFLPESQSADWYPIVGMVLVAIPWSFWFLT 65
Query: 63 YIYHCSKP------------TKVQLNFFGSNSNYNSSSKKTEISNNNEVDVDEDET---- 122
IY C KP T +L+ S+S+ ++++ T S V + + T
Sbjct: 66 CIYRCFKPKQQPPHHHQFIDTANRLSKASSSSHTDTTTTTTTPSTIPHVILPDSSTKAES 125
Query: 123 ----PGGGKRKVHFGAVVVMEKQPPLDRNYSHSK-QP----------TPISPRKTEVPLR 154
PGGG+R+VHFGAV+VMEK P K QP S ++E+PLR
Sbjct: 126 LAHSPGGGERRVHFGAVIVMEKAPDHHEEDDVEKGQPRHRGRDDEANASDSESESEMPLR 185
BLAST of IVF0014902 vs. ExPASy TrEMBL
Match:
A0A2I4FRW9 (uncharacterized protein LOC109001519 OS=Juglans regia OX=51240 GN=LOC109001519 PE=4 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 5.3e-20
Identity = 64/152 (42.11%), Postives = 92/152 (60.53%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDA ++II S + F CI+ GG LL Y+F+P++ S+ WY I+GM+LV PW FW
Sbjct: 1 MEERKGDARVYII-SFMFFACIVTGGILLFLYIFVPQADSASWYPIVGMILVGIPWAFWL 60
Query: 61 SIYIYHCSKP-TKVQLNFFGSNSNYNSSSK---KTEISNNNEVDVDEDETPGGGKRKVHF 120
Y+Y C KP T QL+ NS++ S+ T N+ ++ + GGG+R+VHF
Sbjct: 61 FTYLYRCIKPSTDTQLS--KQNSSHRSTQPVGGATNTDNSRSLESPLNSPCGGGQRRVHF 120
Query: 121 GAVVVMEKQPPLDRNYSHSKQPTPISPRKTEV 149
GAVVV+ + D + + + P S R TE+
Sbjct: 121 GAVVVLGNE---DNSAHDTGRDVPESNRATEL 146
BLAST of IVF0014902 vs. NCBI nr
Match:
XP_004138999.1 (uncharacterized protein LOC101203715 [Cucumis sativus] >KAE8651759.1 hypothetical protein Csa_006785 [Cucumis sativus])
HSP 1 Score: 233 bits (595), Expect = 9.03e-76
Identity = 128/162 (79.01%), Postives = 135/162 (83.33%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDA I +I+SGLIFLCIILGGFLLC YLFLPESQ+SDWY IG+VLVSTPWIFW
Sbjct: 15 MEERKGDARI-VIISGLIFLCIILGGFLLCLYLFLPESQTSDWYPTIGIVLVSTPWIFWL 74
Query: 61 SIYIYHCSKPTKVQLNFFGSNSNYNSSSKKTEISNNNEVDVDED-----ETPGGGKRKVH 120
S+YIYHC KPTKV LN FGSNS NSSSKKTE S NNE DV ED ETPGGGKRKVH
Sbjct: 75 SVYIYHCLKPTKVLLNPFGSNS-INSSSKKTEASKNNEDDVGEDDVGDDETPGGGKRKVH 134
Query: 121 FGAVVVMEKQPPLDRNYSHSKQPTPISPRKTEVPLRLSTSSS 157
FGAV VMEKQP LDRN SHSKQ T SPR+ E+PLRLSTSSS
Sbjct: 135 FGAVFVMEKQPTLDRNSSHSKQSTSTSPREPEMPLRLSTSSS 174
BLAST of IVF0014902 vs. NCBI nr
Match:
XP_038875814.1 (uncharacterized protein LOC120068181 [Benincasa hispida])
HSP 1 Score: 220 bits (560), Expect = 1.38e-70
Identity = 123/166 (74.10%), Postives = 134/166 (80.72%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDA IFII SGLIFLCII GG LLC YLFLPESQ+ DWY I+G+VLVSTPWIFW
Sbjct: 1 MEERKGDARIFII-SGLIFLCIISGGILLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWL 60
Query: 61 SIYIYHCSKPTKVQLNFFGSNSNYNSSSKKTEISNNN------EVDVDEDETPGGGKRKV 120
SIY YHC KPTKVQLN FG N+N NS SKKTE +N N E ++ E E+PG GKR+V
Sbjct: 61 SIYFYHCLKPTKVQLNAFGPNNN-NSHSKKTEAANYNDGGATIEGNLGEVESPGEGKRRV 120
Query: 121 HFGAVVVMEKQPPLDRNYSH---SKQPTPISPRKTEVPLRLSTSSS 157
HFGAVVVMEKQP LDRNYSH SKQPT +SPR+TEVPLR STSSS
Sbjct: 121 HFGAVVVMEKQPQLDRNYSHESQSKQPTTMSPRETEVPLRSSTSSS 164
BLAST of IVF0014902 vs. NCBI nr
Match:
XP_023000624.1 (uncharacterized protein LOC111494867 [Cucurbita maxima])
HSP 1 Score: 144 bits (363), Expect = 1.05e-40
Identity = 74/142 (52.11%), Postives = 101/142 (71.13%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDATI +I+SGL+FLC++ GG LLC YLF+PES+S DWY ++G++LVSTPWIFWF
Sbjct: 1 MEERKGDATI-LIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWF 60
Query: 61 SIYIYHCSKPTKVQLNFFGSNSNYNSSSKKTEISNNN--------EVDVDEDETPGGGKR 120
+Y+YHC KP ++Q N +S+ SS++ +NN+ +V+ + +TPG GKR
Sbjct: 61 LVYLYHCLKPIRLQSNAALKHSS--SSNRPPSAANNSGGIVANLPQVESPDCDTPGDGKR 120
Query: 121 KVHFGAVVVMEKQPPLDRNYSH 134
+VHFGAVVV P + SH
Sbjct: 121 RVHFGAVVVKGNNPQGGKKSSH 139
BLAST of IVF0014902 vs. NCBI nr
Match:
KAG7026101.1 (hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 143 bits (361), Expect = 2.12e-40
Identity = 74/142 (52.11%), Postives = 101/142 (71.13%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDA I +I+SGL+FLC++ GGFLLC YLF+PES+S DWY ++G++LVSTPW+FWF
Sbjct: 1 MEERKGDARI-LIISGLMFLCVVAGGFLLCLYLFVPESESQDWYSVVGIILVSTPWMFWF 60
Query: 61 SIYIYHCSKPTKVQLNFFGSNSNYNSSSKKTEISNNN--------EVDVDEDETPGGGKR 120
+Y+YHC KP +VQ N S+S+ SS++ +N +V+ + +TPG GKR
Sbjct: 61 LVYLYHCLKPIRVQSNAALSHSS--SSNRPPSAANKGGGIVANLPQVESPDCDTPGDGKR 120
Query: 121 KVHFGAVVVMEKQPPLDRNYSH 134
+VHFGAVVV +P + SH
Sbjct: 121 RVHFGAVVVKGNKPQGGKKSSH 139
BLAST of IVF0014902 vs. NCBI nr
Match:
XP_022155761.1 (uncharacterized protein LOC111022806 [Momordica charantia])
HSP 1 Score: 126 bits (317), Expect = 8.12e-34
Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
MEERKGDA I +I+SG+IFLCII GG LL YL+LP+S+S+DWY I+G+VLV+TPWIFW
Sbjct: 5 MEERKGDARI-LIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIFWL 64
Query: 61 SIYIYHCSKPTKV----QLNFFGSNSNYNSSSKKTEISNNNEVDVDEDETPGGGKRKVHF 120
+Y+YHC KP + N F S++N + +N + + ++PGGGKR+VHF
Sbjct: 65 LVYLYHCFKPAAQPQPPRFNAFNSSTN-----RAPPAANPSGAESPNCDSPGGGKRRVHF 124
Query: 121 GAVVVMEKQPPLDRNYSHSKQPTPISPRKTEVPLRLSTSSS 157
G + +H K PR++E+PL S SSS
Sbjct: 125 GTTREEGMDSNTNGGNNHEK-----CPRESELPLSPSISSS 154
BLAST of IVF0014902 vs. TAIR 10
Match:
AT5G17590.1 (Putative membrane lipoprotein )
HSP 1 Score: 62.0 bits (149), Expect = 4.9e-10
Identity = 48/131 (36.64%), Postives = 67/131 (51.15%), Query Frame = 0
Query: 1 MEERKGDATIFIIVSGLIFLCIILGGFLLCFYLFLPESQSSDWYLIIGMVLVSTPWIFWF 60
M++RKGD I+II + L CI++GG LL YL S + +L GMV V PW+FWF
Sbjct: 1 MDQRKGDPRIYII-TVLFLSCILIGGVLLGLYLV--RSDPNPLFLQAGMVFVGVPWLFWF 60
Query: 61 SIYIYHC-SKPTKV---QLNFFGSNSNYNSSSKKTEISNNNEV-----DVDEDETPGGGK 120
Y+Y C KP + Q F S S + +K + + E D +P G+
Sbjct: 61 LAYVYSCVLKPCVIFVSQSTIFNSKSVTSFDPEKGDPNKAPETVTTTSDPAPRNSPREGE 120
Query: 121 RKVHFGAVVVM 123
+ V FG VVV+
Sbjct: 121 KHVQFGNVVVL 128
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LN77 | 2.9e-58 | 79.01 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120380 PE=4 SV=1 | [more] |
A0A6J1KKI3 | 2.3e-31 | 52.86 | uncharacterized protein LOC111494867 OS=Cucurbita maxima OX=3661 GN=LOC111494867... | [more] |
A0A6J1DSP4 | 6.5e-26 | 45.96 | uncharacterized protein LOC111022806 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6P4AHG6 | 5.3e-20 | 42.86 | uncharacterized protein LOC107429042 OS=Ziziphus jujuba OX=326968 GN=LOC10742904... | [more] |
A0A2I4FRW9 | 5.3e-20 | 42.11 | uncharacterized protein LOC109001519 OS=Juglans regia OX=51240 GN=LOC109001519 P... | [more] |
Match Name | E-value | Identity | Description | |
XP_004138999.1 | 9.03e-76 | 79.01 | uncharacterized protein LOC101203715 [Cucumis sativus] >KAE8651759.1 hypothetica... | [more] |
XP_038875814.1 | 1.38e-70 | 74.10 | uncharacterized protein LOC120068181 [Benincasa hispida] | [more] |
XP_023000624.1 | 1.05e-40 | 52.11 | uncharacterized protein LOC111494867 [Cucurbita maxima] | [more] |
KAG7026101.1 | 2.12e-40 | 52.11 | hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022155761.1 | 8.12e-34 | 45.96 | uncharacterized protein LOC111022806 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
AT5G17590.1 | 4.9e-10 | 36.64 | Putative membrane lipoprotein | [more] |