IVF0014885 (gene) Melon (IVF77) v1

Overview


Name	IVF0014885
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	proline-rich protein HaeIII subfamily 1-like
Location	chr08: 22212102 .. 22212541 (+)
RNA-Seq Expression	IVF0014885
Synteny	IVF0014885

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCAAAAAGTTGGATAATGATGTTAGGAGGTTGGTTACTTGTTCTCCTAGGGTTTCATCTTATTGCTGTCCAAACACATGCTAGACCTATTCCTCCATCTGGATCGAATCCGACTACGTCCGACCCCCCTCCTCCACCACCATCAAATTTCATTTTCAAAATGTATCCAAAAGGCATTGTTCCACCATCTGGGCCAAGTCAAAGAACATCAGACTCTTCTCCACCCCTCCATTCAATATCTTACAAAACAAGTTTGATTTTGGAATGTATCCAAAAGGCATTGTTCCACCATCTGGACCAAGCCAAAGGACATCCGACTCTTCTCCCCCGCCTCCATCCAATTTCTTTGAGGAGAGGTTTGGACGCGTACCTGTTCCACCTTCAGGACCAAACCCAACCACATCTGACTCTCCTCCTCCGCCTCCATCTCACTAG

mRNA sequence

ATGGCATCAAAAAGTTGGATAATGATGTTAGGAGGTTGGTTACTTGTTCTCCTAGGGTTTCATCTTATTGCTGTCCAAACACATGCTAGACCTATTCCTCCATCTGGATCGAATCCGACTACGTCCGACCCCCCTCCTCCACCACCATCAAATTTCATTTTCAAAATACTCTTCTCCACCCCTCCATTCAATATCTTACAAAACAAGTTTGATTTTGGAATGTATCCAAAAGGCATTGTTCCACCATCTGGACCAAGCCAAAGGACATCCGACTCTTCTCCCCCGCCTCCATCCAATTTCTTTGAGGAGAGGTTTGGACGCGTACCTGTTCCACCTTCAGGACCAAACCCAACCACATCTGACTCTCCTCCTCCGCCTCCATCTCACTAG

Coding sequence (CDS)

ATGGCATCAAAAAGTTGGATAATGATGTTAGGAGGTTGGTTACTTGTTCTCCTAGGGTTTCATCTTATTGCTGTCCAAACACATGCTAGACCTATTCCTCCATCTGGATCGAATCCGACTACGTCCGACCCCCCTCCTCCACCACCATCAAATTTCATTTTCAAAATACTCTTCTCCACCCCTCCATTCAATATCTTACAAAACAAGTTTGATTTTGGAATGTATCCAAAAGGCATTGTTCCACCATCTGGACCAAGCCAAAGGACATCCGACTCTTCTCCCCCGCCTCCATCCAATTTCTTTGAGGAGAGGTTTGGACGCGTACCTGTTCCACCTTCAGGACCAAACCCAACCACATCTGACTCTCCTCCTCCGCCTCCATCTCACTAG

Protein sequence

MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFKILFSTPPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEERFGRVPVPPSGPNPTTSDSPPPPPSH

Homology

[Close]

BLAST of IVF0014885 vs. ExPASy TrEMBL
Match: A0A5D3C2C7 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00150 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.3e-60
Identity = 124/146 (84.93%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFKIL--- 60
           MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFK+    
Sbjct: 1   MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFKMYPKG 60

Query: 61  --------------FSTPPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE 120
                            PPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE
Sbjct: 61  IVPPSGPSQRTSDSSPPPPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE 120

Query: 121 RFGRVPVPPSGPNPTTSDSPPPPPSH 130
           RFGRVPVPPSGPNPTTSDSPPPPPSH
Sbjct: 121 RFGRVPVPPSGPNPTTSDSPPPPPSH 146

[Close]

BLAST of IVF0014885 vs. ExPASy TrEMBL
Match: A0A1S3B4V4 (proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo OX=3656 GN=LOC103486183 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.3e-60
Identity = 124/146 (84.93%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFKIL--- 60
           MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFK+    
Sbjct: 1   MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFKMYPKG 60

Query: 61  --------------FSTPPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE 120
                            PPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE
Sbjct: 61  IVPPSGPSQRTSDSSPPPPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE 120

Query: 121 RFGRVPVPPSGPNPTTSDSPPPPPSH 130
           RFGRVPVPPSGPNPTTSDSPPPPPSH
Sbjct: 121 RFGRVPVPPSGPNPTTSDSPPPPPSH 146

[Close]

BLAST of IVF0014885 vs. ExPASy TrEMBL
Match: A0A6J5XM21 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.8e-10
Identity = 54/102 (52.94%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 31  PIPPSGSNPTTSDPPPPPPSNFIFKILFSTPPFNILQNKFDFGMYPKGI-VPPSGPSQRT 90
           PIPPSG +  TSDPPPPPP           PPFN       FG  PK   +PPSGPS RT
Sbjct: 131 PIPPSGPSGRTSDPPPPPP-----------PPFN-------FGTLPKYTPIPPSGPSGRT 190

Query: 91  SDSSPPPPSNFFEERFGRV----PVPPSGPNPTTSDSPPPPP 128
           SD  PPPP  F    FG +    P+PPSGP+  TSD PPPPP
Sbjct: 191 SDPPPPPPPPF---NFGTLPKYTPIPPSGPSGRTSDPPPPPP 211

[Close]

BLAST of IVF0014885 vs. ExPASy TrEMBL
Match: A0A6J5V9I4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39963 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.8e-10
Identity = 54/102 (52.94%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 31  PIPPSGSNPTTSDPPPPPPSNFIFKILFSTPPFNILQNKFDFGMYPKGI-VPPSGPSQRT 90
           PIPPSG +  TSDPPPPPP           PPFN       FG  PK   +PPSGPS RT
Sbjct: 101 PIPPSGPSGRTSDPPPPPP----------PPPFN-------FGTLPKYTPIPPSGPSGRT 160

Query: 91  SDSSPPPPSNFFEERFGRV----PVPPSGPNPTTSDSPPPPP 128
           SD  PPPP  F    FG +    P+PPSGP+  TSD PPPPP
Sbjct: 161 SDPPPPPPPPF---NFGTLPKYTPIPPSGPSGRTSDPPPPPP 182

[Close]

BLAST of IVF0014885 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-10
Identity = 53/105 (50.48%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 31  PIPPSGSNPTTSDPPPPPP--SNFIFKILFSTPPFNILQNKFDFGMYPKGI-VPPSGPSQ 90
           PIPP G +  TSD P PPP  S+ I             Q+K +FGM PKG+ +PPSGPS 
Sbjct: 372 PIPPPGLSQRTSDYPHPPPHASSVILN----------KQSKINFGMLPKGVPIPPSGPSH 431

Query: 91  RTSDSSPPPPSNFFEE-RFGR----VPVPPSGPNPTTSDSPPPPP 128
           RTSD  PPPP   + +  FG     VP+PPSGP+  TSD PPPPP
Sbjct: 432 RTSDYPPPPPHVLWPKINFGMLPKDVPIPPSGPSQRTSDYPPPPP 466

[Close]

BLAST of IVF0014885 vs. NCBI nr
Match: XP_008442275.1 (PREDICTED: proline-rich protein HaeIII subfamily 1-like [Cucumis melo] >KAA0041826.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK05348.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (608), Expect = 1.20e-78
Identity = 124/146 (84.93%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFKIL--- 60
           MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFK+    
Sbjct: 1   MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFKMYPKG 60

Query: 61  --------------FSTPPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE 120
                            PPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE
Sbjct: 61  IVPPSGPSQRTSDSSPPPPFNILQNKFDFGMYPKGIVPPSGPSQRTSDSSPPPPSNFFEE 120

Query: 121 RFGRVPVPPSGPNPTTSDSPPPPPSH 129
           RFGRVPVPPSGPNPTTSDSPPPPPSH
Sbjct: 121 RFGRVPVPPSGPNPTTSDSPPPPPSH 146

[Close]

BLAST of IVF0014885 vs. NCBI nr
Match: XP_011654399.2 (proline-rich protein HaeIII subfamily 1-like [Cucumis sativus])

HSP 1 Score: 170 bits (430), Expect = 1.61e-51
Identity = 100/146 (68.49%), Postives = 105/146 (71.92%), Query Frame = 0


Query: 8   MMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPPSNFIFKILFS-------- 67
           M+LG   LVLLGFHLIAVQTHARPIPP+GSNPTTSDP PPPPSN IFK+           
Sbjct: 1   MILGASFLVLLGFHLIAVQTHARPIPPTGSNPTTSDPTPPPPSNSIFKVYSKGIIPPSGP 60

Query: 68  ---------TPPFNILQNKFDFGMYPKGI-VPPSGPSQRTSDSSPPPPSNFFEER---FG 127
                     PPFNILQ KFDFGMYPKGI +PPSGPSQRTSDSSPPPPSNFF      FG
Sbjct: 61  SQRTSDSSPPPPFNILQKKFDFGMYPKGIPIPPSGPSQRTSDSSPPPPSNFFHHNTFGFG 120

[Close]

BLAST of IVF0014885 vs. NCBI nr
Match: KAG6728892.1 (hypothetical protein I3842_01G000100 [Carya illinoinensis])

HSP 1 Score: 80.1 bits (196), Expect = 1.10e-15
Identity = 49/99 (49.49%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 31  PIPPSGSNPTTSDPPPPPPSNFIFKILFSTPPFNILQNKFDFGMYPKGIVPPSGPSQRTS 90
           P+PPSG +  TSD PPPPP +   + L                   KG VPPSGPS+RTS
Sbjct: 91  PVPPSGPSKRTSDSPPPPPHHRFNQALI------------------KGPVPPSGPSKRTS 150

Query: 91  DSSPPPPSNFFEERFGRVPVPPSGPNPTTSDSPPPPPSH 129
           DS PPPP + F +   + PVPPS PN  T DSPPPPP H
Sbjct: 151 DSPPPPPHHRFNQALVKGPVPPSAPNQRTYDSPPPPPHH 171

[Close]

BLAST of IVF0014885 vs. NCBI nr
Match: XP_042939494.1 (proline-rich protein 2-like [Carya illinoinensis] >KAG2724057.1 hypothetical protein I3760_01G000100 [Carya illinoinensis])

HSP 1 Score: 80.1 bits (196), Expect = 1.61e-15
Identity = 49/99 (49.49%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 31  PIPPSGSNPTTSDPPPPPPSNFIFKILFSTPPFNILQNKFDFGMYPKGIVPPSGPSQRTS 90
           P+PPSG +  TSD PPPPP +   + L                   KG VPPSGPS+RTS
Sbjct: 110 PVPPSGPSKRTSDSPPPPPHHRFNQALI------------------KGPVPPSGPSKRTS 169

Query: 91  DSSPPPPSNFFEERFGRVPVPPSGPNPTTSDSPPPPPSH 129
           DS PPPP + F +   + PVPPS PN  T DSPPPPP H
Sbjct: 170 DSPPPPPHHRFNQALVKGPVPPSAPNQRTYDSPPPPPHH 190

[Close]

BLAST of IVF0014885 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.1 bits (196), Expect = 1.07e-14
Identity = 56/111 (50.45%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 31  PIPPSGSNPTTSDPPPPPP--SNFIFKILFSTPPFNILQNKFDFGMYPKGI-VPPSGPSQ 90
           PIPPSG +  TSD PPPPP  S+FI             Q+K +FGM PKG+ +PPSGPSQ
Sbjct: 213 PIPPSGPSQRTSDYPPPPPHASSFILNT----------QSKINFGMLPKGVPIPPSGPSQ 272

Query: 91  RTSDSSPPPP-------SNFFEERFGR----VPVPPSGPNPTTSDSPPPPP 127
           RTSD  PPPP       +   +  FG     VP+PPSGP+  TS+ PPPPP
Sbjct: 273 RTSDYPPPPPHASSVILNTQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPP 313

The following BLAST results are available for this feature:

BLAST of IVF0014885 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0014885 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2C7	4.3e-60	84.93	Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3B4V4	4.3e-60	84.93	proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J5XM21	1.8e-10	52.94	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=...	[more]
A0A6J5V9I4	1.8e-10	52.94	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39963 PE=4 S...	[more]
A0A6J1HRH7	3.1e-10	50.48	actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3...	[more]

BLAST of IVF0014885 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442275.1	1.20e-78	84.93	PREDICTED: proline-rich protein HaeIII subfamily 1-like [Cucumis melo] >KAA00418...	[more]
XP_011654399.2	1.61e-51	68.49	proline-rich protein HaeIII subfamily 1-like [Cucumis sativus]	[more]
KAG6728892.1	1.10e-15	49.49	hypothetical protein I3842_01G000100 [Carya illinoinensis]	[more]
XP_042939494.1	1.61e-15	49.49	proline-rich protein 2-like [Carya illinoinensis] >KAG2724057.1 hypothetical pro...	[more]
KAG6603169.1	1.07e-14	50.45	hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0014885 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014885.1	IVF0014885.1	mRNA