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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGCTTCAGAATCAACAGTCCAAGCACTCGGAAATTGTACCGGAAGTCGATCGGCAGGGAAATTGGCGACGTGGGTGGTTGTAAATCGGAAAAAATGGCGGTGGTGGAGTACCGGAAAGAGCCGGGAAGGGAATTTACCGGCTCCTTGCAGGCGTAA mRNA sequence ATGAGCTTCAGAATCAACAGTCCAAGCACTCGGAAATTGTACCGGAAGTCGATCGGCAGGGAAATTGGCGACGTGGGTGGTTGTAAATCGGAAAAAATGGCGGTGGTGGAGTACCGGAAAGAGCCGGGAAGGGAATTTACCGGCTCCTTGCAGGCGTAA Coding sequence (CDS) ATGAGCTTCAGAATCAACAGTCCAAGCACTCGGAAATTGTACCGGAAGTCGATCGGCAGGGAAATTGGCGACGTGGGTGGTTGTAAATCGGAAAAAATGGCGGTGGTGGAGTACCGGAAAGAGCCGGGAAGGGAATTTACCGGCTCCTTGCAGGCGTAA Protein sequence MSFRINSPSTRKLYRKSIGREIGDVGGCKSEKMAVVEYRKEPGREFTGSLQA
Homology
BLAST of IVF0014866 vs. ExPASy TrEMBL
Match: A0A5D3CZS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G002050 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query: 1 MSFRINSPSTRKLYRKSIGREIGDVGGCKSEKMAVVEYRKEPGREFTGSLQA 53
MSFRINSPSTRKLYRKSIGREIGDVGGCKSEKMAVVEYRKEPGREFTGSLQA
Sbjct: 1 MSFRINSPSTRKLYRKSIGREIGDVGGCKSEKMAVVEYRKEPGREFTGSLQA 52
BLAST of IVF0014866 vs. ExPASy TrEMBL
Match: A0A0A0KU19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G010970 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.6e-05 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 0
Query: 1 MSFRINSPSTRKLYRKSIGREIGDVGGCKSEK 33
M FRINSPSTRK YRKSIG++IGDV GCKSEK
Sbjct: 1 MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEK 32
BLAST of IVF0014866 vs. NCBI nr
Match: KAA0044531.1 (hypothetical protein E6C27_scaffold46G002740 [Cucumis melo var. makuwa] >TYK17052.1 hypothetical protein E5676_scaffold130G002050 [Cucumis melo var. makuwa]) HSP 1 Score: 108 bits (270), Expect = 1.03e-29 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query: 1 MSFRINSPSTRKLYRKSIGREIGDVGGCKSEKMAVVEYRKEPGREFTGSLQA 52
MSFRINSPSTRKLYRKSIGREIGDVGGCKSEKMAVVEYRKEPGREFTGSLQA
Sbjct: 1 MSFRINSPSTRKLYRKSIGREIGDVGGCKSEKMAVVEYRKEPGREFTGSLQA 52
BLAST of IVF0014866 vs. NCBI nr
Match: KGN52998.1 (hypothetical protein Csa_014811 [Cucumis sativus]) HSP 1 Score: 58.5 bits (140), Expect = 1.13e-09 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 0
Query: 1 MSFRINSPSTRKLYRKSIGREIGDVGGCKSEK 32
M FRINSPSTRK YRKSIG++IGDV GCKSEK
Sbjct: 1 MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEK 32
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CZS3 | 1.8e-20 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0KU19 | 1.6e-05 | 84.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G010970 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0044531.1 | 1.03e-29 | 100.00 | hypothetical protein E6C27_scaffold46G002740 [Cucumis melo var. makuwa] >TYK1705... | [more] |
| KGN52998.1 | 1.13e-09 | 84.38 | hypothetical protein Csa_014811 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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