IVF0014840 (gene) Melon (IVF77) v1

Overview
NameIVF0014840
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr02: 12576062 .. 12576385 (-)
RNA-Seq ExpressionIVF0014840
SyntenyIVF0014840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCATCATTCACCAAGTTACCACTTGCACTCCTTTTCTGCATTTTCATTTTAGCATCATCGGTAATGGCTCGCCCGGTAACGGTGGCAGCAGCAGCTCCTATAGGGGATATCTCTTTGTTTCCCTGCAAATCATTTGTTCCCAAGGCCACAGAATGTGTGATTGATGTGCTTAAAAATGCAGTTGCTCCTCATCCTTCTTGTTGCCAAGCCATTTCTGAACTCCATGATTGTTCATCCCAGTTTCTCAAAGACATTCCCTCCGTCGATATGATTTTGGTTAAGAGTATTTGTGCTTTGTGGGGTGTTTCTATTTCATAG

mRNA sequence

ATGGCAGCATCATTCACCAAGTTACCACTTGCACTCCTTTTCTGCATTTTCATTTTAGCATCATCGGTAATGGCTCGCCCGGTAACGGTGGCAGCAGCAGCTCCTATAGGGGATATCTCTTTGTTTCCCTGCAAATCATTTGTTCCCAAGGCCACAGAATGTGTGATTGATGTGCTTAAAAATGCAGTTGCTCCTCATCCTTCTTGTTGCCAAGCCATTTCTGAACTCCATGATTGTTCATCCCAGTTTCTCAAAGACATTCCCTCCGTCGATATGATTTTGGTTAAGAGTATTTGTGCTTTGTGGGGTGTTTCTATTTCATAG

Coding sequence (CDS)

ATGGCAGCATCATTCACCAAGTTACCACTTGCACTCCTTTTCTGCATTTTCATTTTAGCATCATCGGTAATGGCTCGCCCGGTAACGGTGGCAGCAGCAGCTCCTATAGGGGATATCTCTTTGTTTCCCTGCAAATCATTTGTTCCCAAGGCCACAGAATGTGTGATTGATGTGCTTAAAAATGCAGTTGCTCCTCATCCTTCTTGTTGCCAAGCCATTTCTGAACTCCATGATTGTTCATCCCAGTTTCTCAAAGACATTCCCTCCGTCGATATGATTTTGGTTAAGAGTATTTGTGCTTTGTGGGGTGTTTCTATTTCATAG

Protein sequence

MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS
Homology
BLAST of IVF0014840 vs. ExPASy TrEMBL
Match: A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-50
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK 60
           MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK 60

Query: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 108
           NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS
Sbjct: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

BLAST of IVF0014840 vs. ExPASy TrEMBL
Match: A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.8e-50
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0

Query: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK 60
           MAASFTKLPLALLFCIFILASSVMARPVTVAAAAP GDISLFPCKSFVPKATECVIDVLK
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPEGDISLFPCKSFVPKATECVIDVLK 60

Query: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 108
           NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS
Sbjct: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

BLAST of IVF0014840 vs. ExPASy TrEMBL
Match: A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.3e-37
Identity = 86/106 (81.13%), Postives = 91/106 (85.85%), Query Frame = 0

Query: 3   ASFTKLPLALLFCIFILASSVMARPVTVAAAAPIG-DISLFPCKSFVPKATECVIDVLKN 62
           ++ TKLPL LL CI ILASSV ARP  VAAA P   D SLFPC SFVPKAT+CVIDVLKN
Sbjct: 4   SAITKLPLVLLVCIAILASSVTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKN 63

Query: 63  AVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 108
           AVAPHPSCC+AIS+LHDCSSQFLKDIPS DMILVKSICA WGVSIS
Sbjct: 64  AVAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109

BLAST of IVF0014840 vs. ExPASy TrEMBL
Match: A0A5A7U2D8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00440 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.3e-35
Identity = 85/106 (80.19%), Postives = 90/106 (84.91%), Query Frame = 0

Query: 3   ASFTKLPLALLFCIFILASSVMARPVTVAAAAPIG-DISLFPCKSFVPKATECVIDVLKN 62
           ++ TKLPL LL CI ILASSV ARP  VAAA PI  D SLFPC SFVP AT+ VIDVLKN
Sbjct: 4   SAITKLPLILLVCIAILASSVTARPTIVAAATPISKDFSLFPCISFVPMATKRVIDVLKN 63

Query: 63  AVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 108
           AVAPHPSCC+AIS+LHDCSSQFLKDIPS DMILVKSICA WGVSIS
Sbjct: 64  AVAPHPSCCEAISQLHDCSSQFLKDIPSDDMILVKSICASWGVSIS 109

BLAST of IVF0014840 vs. ExPASy TrEMBL
Match: A0A5A7U9B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00630 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34
Identity = 82/106 (77.36%), Postives = 88/106 (83.02%), Query Frame = 0

Query: 3   ASFTKLPLALLFCIFILASSVMARPVTVAAAAPIG-DISLFPCKSFVPKATECVIDVLKN 62
           ++ TKLPL L  CI ILASSV A P  VAAA P   D SLFPC SFVPKAT+CVIDVLKN
Sbjct: 4   SAITKLPLVLRVCIAILASSVTACPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKN 63

Query: 63  AVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 108
            VAPHPSCC+AI++LHDCSSQFLKDIPS DMILVKSICA WGVSIS
Sbjct: 64  VVAPHPSCCEAITQLHDCSSQFLKDIPSGDMILVKSICASWGVSIS 109

BLAST of IVF0014840 vs. NCBI nr
Match: TYK10343.1 (hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (527), Expect = 3.03e-67
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK 60
           MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK 60

Query: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107
           NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS
Sbjct: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

BLAST of IVF0014840 vs. NCBI nr
Match: KAA0050065.1 (hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (520), Expect = 3.54e-66
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0

Query: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK 60
           MAASFTKLPLALLFCIFILASSVMARPVTVAAAAP GDISLFPCKSFVPKATECVIDVLK
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPEGDISLFPCKSFVPKATECVIDVLK 60

Query: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107
           NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS
Sbjct: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

BLAST of IVF0014840 vs. NCBI nr
Match: TYK10345.1 (hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (411), Expect = 1.58e-49
Identity = 86/106 (81.13%), Postives = 91/106 (85.85%), Query Frame = 0

Query: 3   ASFTKLPLALLFCIFILASSVMARPVTVAAAAPIG-DISLFPCKSFVPKATECVIDVLKN 62
           ++ TKLPL LL CI ILASSV ARP  VAAA P   D SLFPC SFVPKAT+CVIDVLKN
Sbjct: 4   SAITKLPLVLLVCIAILASSVTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKN 63

Query: 63  AVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107
           AVAPHPSCC+AIS+LHDCSSQFLKDIPS DMILVKSICA WGVSIS
Sbjct: 64  AVAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109

BLAST of IVF0014840 vs. NCBI nr
Match: KAA0050063.1 (hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 157 bits (396), Expect = 3.06e-47
Identity = 85/106 (80.19%), Postives = 90/106 (84.91%), Query Frame = 0

Query: 3   ASFTKLPLALLFCIFILASSVMARPVTVAAAAPIG-DISLFPCKSFVPKATECVIDVLKN 62
           ++ TKLPL LL CI ILASSV ARP  VAAA PI  D SLFPC SFVP AT+ VIDVLKN
Sbjct: 4   SAITKLPLILLVCIAILASSVTARPTIVAAATPISKDFSLFPCISFVPMATKRVIDVLKN 63

Query: 63  AVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107
           AVAPHPSCC+AIS+LHDCSSQFLKDIPS DMILVKSICA WGVSIS
Sbjct: 64  AVAPHPSCCEAISQLHDCSSQFLKDIPSDDMILVKSICASWGVSIS 109

BLAST of IVF0014840 vs. NCBI nr
Match: KAA0050079.1 (hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (389), Expect = 3.57e-46
Identity = 82/106 (77.36%), Postives = 88/106 (83.02%), Query Frame = 0

Query: 3   ASFTKLPLALLFCIFILASSVMARPVTVAAAAPIG-DISLFPCKSFVPKATECVIDVLKN 62
           ++ TKLPL L  CI ILASSV A P  VAAA P   D SLFPC SFVPKAT+CVIDVLKN
Sbjct: 4   SAITKLPLVLRVCIAILASSVTACPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKN 63

Query: 63  AVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107
            VAPHPSCC+AI++LHDCSSQFLKDIPS DMILVKSICA WGVSIS
Sbjct: 64  VVAPHPSCCEAITQLHDCSSQFLKDIPSGDMILVKSICASWGVSIS 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CEQ41.5e-50100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U8Y39.8e-5099.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CFS64.3e-3781.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U2D82.3e-3580.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U9B01.5e-3477.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK10343.13.03e-67100.00hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa][more]
KAA0050065.13.54e-6699.07hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa][more]
TYK10345.11.58e-4981.13hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa][more]
KAA0050063.13.06e-4780.19hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa][more]
KAA0050079.13.57e-4677.36hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0014840.2IVF0014840.2mRNA