IVF0014785 (gene) Melon (IVF77) v1

Overview


Name	IVF0014785
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr07: 22298115 .. 22298553 (-)
RNA-Seq Expression	IVF0014785
Synteny	IVF0014785

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAATTATACACAGCAGCTCCACAAATATCAAATGCCTCAATGTTCTATCTCAACAACCCATCAAAAGTTACAAGAAATGAAGAAAAGATTGAAATTCCAAGACATAAAACTACCGGAGAAGGTTTTGTCGACATTTCCCACCCACCACAGACGCACATTGCCCAAGAGAAGTGAGAATAAAGTTCAAAAAGAGACAAAATTGGATAACATTCCGCAAAATTGGGCATAGTAAAGCGAGACCTGATGACGAATTGGACCCCAAAACGTACTTCTACAAGAGCGTTACGAACATGGGAGACCATTTAACGTTGGCAGAAATCAAGGCATTGTGGAGAGAAACAAACAAAACAATGAGAGGAGAATCAGTGAAGTCACTCACCAGGAAACAGAGAAGGGGGGAAAGGAAAGAAACCCTAGAACAGAAAGTGCATGA

mRNA sequence

ATGAATGAATTATACACAGCAGCTCCACAAATATCAAATGCCTCAATGTTCTATCTCAACAACCCATCAAAAGTTACAAGAAATGAAGAAAAGATTGAAATTCCAAGACATAAAACTACCGGAGAAGGTTTTGTCGACATTTCCCACCCACCACAGACGCACATTGCCCAAGAGAAACCATTTAACGTTGGCAGAAATCAAGGCATTGTGGAGAGAAACAAACAAAACAATGAGAGGAGAATCAGTGAAGTCACTCACCAGGAAACAGAGAAGGGGGGAAAGGAAAGAAACCCTAGAACAGAAAGTGCATGA

Coding sequence (CDS)

ATGAATGAATTATACACAGCAGCTCCACAAATATCAAATGCCTCAATGTTCTATCTCAACAACCCATCAAAAGTTACAAGAAATGAAGAAAAGATTGAAATTCCAAGACATAAAACTACCGGAGAAGGTTTTGTCGACATTTCCCACCCACCACAGACGCACATTGCCCAAGAGAAACCATTTAACGTTGGCAGAAATCAAGGCATTGTGGAGAGAAACAAACAAAACAATGAGAGGAGAATCAGTGAAGTCACTCACCAGGAAACAGAGAAGGGGGGAAAGGAAAGAAACCCTAGAACAGAAAGTGCATGA

Protein sequence

MNELYTAAPQISNASMFYLNNPSKVTRNEEKIEIPRHKTTGEGFVDISHPPQTHIAQEKPFNVGRNQGIVERNKQNNERRISEVTHQETEKGGKERNPRTESA

Homology

[Close]

BLAST of IVF0014785 vs. ExPASy TrEMBL
Match: A0A5A7TMR9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003530 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.8e-15
Identity = 57/118 (48.31%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 29  EEKIEIPRHKTTGEGFVDISHP-------------------------------------- 88
           +++++    K  GEGFVDISHP                                      
Sbjct: 2   KKRLKFQDIKLPGEGFVDISHPTTDAHCPREVRIKFKKRQNWITFRKIGHSKARPDDELD 61

Query: 89  PQTHIAQE-----KPFNVGRNQGIVERNKQNNERRISEVTHQETEKGGKERNPRTESA 104
           P+T+  +      +PFNVGRNQGIVERNKQNNERRISEVTHQETEKGGKERNPRTESA
Sbjct: 62  PKTYFYKSVTNMGRPFNVGRNQGIVERNKQNNERRISEVTHQETEKGGKERNPRTESA 119

[Close]

BLAST of IVF0014785 vs. ExPASy TrEMBL
Match: A0A0A0KU78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015730 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.6e-04
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 16  MFYLNNPSKVTRNEEKIEIPRHKTTGEGFVDISHPPQTHIAQEKPFNVGRNQGIVERNKQ 75
           MFYLNNPSKVTRNEEKIEIPRHKTTG  F    H P +H  +  P    RN+  +++  +
Sbjct: 1   MFYLNNPSKVTRNEEKIEIPRHKTTGRRF--YQHFP-SHNRRTLP---KRNENKIKKETK 60

Query: 76  NNERRISEVTHQETEKGGKERNPRTE 102
            +     ++ H +  +   E +P+T+
Sbjct: 61  LDNIPFRKIGHSKA-RPDNELDPKTK 79

[Close]

BLAST of IVF0014785 vs. NCBI nr
Match: KAA0044602.1 (hypothetical protein E6C27_scaffold46G003530 [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 1.78e-21
Identity = 57/118 (48.31%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 29  EEKIEIPRHKTTGEGFVDISHP-------------------------------------- 88
           +++++    K  GEGFVDISHP                                      
Sbjct: 2   KKRLKFQDIKLPGEGFVDISHPTTDAHCPREVRIKFKKRQNWITFRKIGHSKARPDDELD 61

Query: 89  PQTHIAQE-----KPFNVGRNQGIVERNKQNNERRISEVTHQETEKGGKERNPRTESA 103
           P+T+  +      +PFNVGRNQGIVERNKQNNERRISEVTHQETEKGGKERNPRTESA
Sbjct: 62  PKTYFYKSVTNMGRPFNVGRNQGIVERNKQNNERRISEVTHQETEKGGKERNPRTESA 119

[Close]

BLAST of IVF0014785 vs. NCBI nr
Match: KGN53083.1 (hypothetical protein Csa_014843 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 8.12e-09
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0


Query: 16 MFYLNNPSKVTRNEEKIEIPRHKTTGEGF 44
          MFYLNNPSKVTRNEEKIEIPRHKTTG  F
Sbjct: 1  MFYLNNPSKVTRNEEKIEIPRHKTTGRRF 29

The following BLAST results are available for this feature:

BLAST of IVF0014785 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0014785 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMR9	5.8e-15	48.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KU78	4.6e-04	43.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015730 PE=4 SV=1	[more]

BLAST of IVF0014785 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044602.1	1.78e-21	48.31	hypothetical protein E6C27_scaffold46G003530 [Cucumis melo var. makuwa]	[more]
KGN53083.1	8.12e-09	93.10	hypothetical protein Csa_014843 [Cucumis sativus]	[more]

BLAST of IVF0014785 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014785.1	IVF0014785.1	mRNA