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IVF0014762 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCTTTAATTTCTCTCAGCTCCCTAAAAACTTCTCTAATTGCCTTCATCACAACTATTTTTTTCATCATGTCTTCAAGAAGATCTTCTCGCTCCAGAAACTCCTCAGCTTCTTCTCCATTAATCTCCGACGATCAAATCGCTGATCTTGTTTCTAAGTTGCAACGTCTCATACCCGAGCTTCGTAATCCCCGTGCCTCCCACAAGGTAAATTTAAAACATGAGCATACTTCAACTAGCATAAAAGAATATATTTGTTAATCATCTTTAATTTGGTTTTTGTTTATAATCTTCTTCTTTGTGTTTCCAAAAGGGTTATTAAATATTGTCTCCCCACATGTCGGGTTGTGGGTCTCATATTGTTCCCTGCTTCCACTGCCAATGCATCTGGGATACTCCAAATTCCCCCCTCCACACACCATCCCATTATTTCAATTCATTATTCTTCTTCATATATACCCTTTCCTACTATTTCAATCACTCCCTCATATATATTTTAATGATATCCGTTCCCATATAGATTTCAAAATCTATCCACTTCGGATAATAATAAATGAAAAAACTTACTAGGATAATAGTTTGAATGATGGATAAATCTCTCACGAGCTACATTCTGGCAGTCTCTCAAAATAATGATCTCTTTCTTACAAAGGTTTTCTACTTTTTATTTCTAGTACTGTAAAATCTCTGTCACATAAATGACTTAAAAAAAAAATACTTTTGTGCATCTTGACTTGCACAAGATCACATTAAAACTCTCTAGAACTAAAGTGTACTTAAACGAGAGAGCGTAATATTAAGTTGAGTGATGTGTGGTTTTAGAAAAAGAAAAATTAAATGCGACTAAAATATTAGTTTGGAAAATTAATTATAGCTTTCACCTGTTGTAAAAAATCTTGTAACGATATATTTAATTTTACGAGTGTAGGTGTCGGCTTCAAGAGTGTTACAAGAAACATGCAACTACATAAGGAACTTACACAGAGAAGTGGATGATTTAAGTGAGCGATTGTCACAACTTTTGGCAGCAACTGAAAACGACAGCGCCGAGGCTGCCATTATTAGGAGTTTATTTCTGTAAAGAACCCATTTAAATAACCACAGTTTCCCTACCCATAAATTAATTACTACGACGTCGTTAATTTCCCTTTTTCATTC GTCCTTTAATTTCTCTCAGCTCCCTAAAAACTTCTCTAATTGCCTTCATCACAACTATTTTTTTCATCATGTCTTCAAGAAGATCTTCTCGCTCCAGAAACTCCTCAGCTTCTTCTCCATTAATCTCCGACGATCAAATCGCTGATCTTGTTTCTAAGTTGCAACGTCTCATACCCGAGCTTCGTAATCCCCGTGCCTCCCACAAGGTGTCGGCTTCAAGAGTGTTACAAGAAACATGCAACTACATAAGGAACTTACACAGAGAAGTGGATGATTTAAGTGAGCGATTGTCACAACTTTTGGCAGCAACTGAAAACGACAGCGCCGAGGCTGCCATTATTAGGAGTTTATTTCTGTAAAGAACCCATTTAAATAACCACAGTTTCCCTACCCATAAATTAATTACTACGACGTCGTTAATTTCCCTTTTTCATTC ATGTCTTCAAGAAGATCTTCTCGCTCCAGAAACTCCTCAGCTTCTTCTCCATTAATCTCCGACGATCAAATCGCTGATCTTGTTTCTAAGTTGCAACGTCTCATACCCGAGCTTCGTAATCCCCGTGCCTCCCACAAGGTGTCGGCTTCAAGAGTGTTACAAGAAACATGCAACTACATAAGGAACTTACACAGAGAAGTGGATGATTTAAGTGAGCGATTGTCACAACTTTTGGCAGCAACTGAAAACGACAGCGCCGAGGCTGCCATTATTAGGAGTTTATTTCTGTAA MSSRRSSRSRNSSASSPLISDDQIADLVSKLQRLIPELRNPRASHKVSASRVLQETCNYIRNLHREVDDLSERLSQLLAATENDSAEAAIIRSLFL Homology
BLAST of IVF0014762 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.8e-28 Identity = 75/94 (79.79%), Postives = 84/94 (89.36%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23 Identity = 67/94 (71.28%), Postives = 80/94 (85.11%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy Swiss-Prot
Match: Q9FLE9 (Transcription factor PRE1 OS=Arabidopsis thaliana OX=3702 GN=PRE1 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.8e-23 Identity = 60/96 (62.50%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy Swiss-Prot
Match: Q9LJX1 (Transcription factor PRE5 OS=Arabidopsis thaliana OX=3702 GN=PRE5 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.8e-23 Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy Swiss-Prot
Match: F4JCN9 (Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22 Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy TrEMBL
Match: A0A5D3BPI2 (Transcription factor PRE6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00850 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.8e-40 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy TrEMBL
Match: A0A1S3CPL2 (transcription factor PRE6-like OS=Cucumis melo OX=3656 GN=LOC103503223 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.8e-40 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy TrEMBL
Match: A0A0A0KDL6 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G404200 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy TrEMBL
Match: A0A6J1KGK3 (transcription factor PRE6-like OS=Cucurbita maxima OX=3661 GN=LOC111494030 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.8e-32 Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of IVF0014762 vs. ExPASy TrEMBL
Match: A0A6J1G4C0 (transcription factor PRE6-like OS=Cucurbita moschata OX=3662 GN=LOC111450613 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.8e-32 Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of IVF0014762 vs. NCBI nr
Match: XP_008465587.1 (PREDICTED: transcription factor PRE6-like [Cucumis melo] >KAA0036447.1 transcription factor PRE6-like [Cucumis melo var. makuwa] >TYK00039.1 transcription factor PRE6-like [Cucumis melo var. makuwa]) HSP 1 Score: 175 bits (443), Expect = 8.88e-55 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of IVF0014762 vs. NCBI nr
Match: XP_004146747.1 (transcription factor PRE6 [Cucumis sativus] >KGN47805.1 hypothetical protein Csa_003742 [Cucumis sativus]) HSP 1 Score: 169 bits (427), Expect = 2.45e-52 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of IVF0014762 vs. NCBI nr
Match: XP_038886241.1 (transcription factor PRE6-like [Benincasa hispida]) HSP 1 Score: 162 bits (410), Expect = 9.32e-50 Identity = 89/96 (92.71%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of IVF0014762 vs. NCBI nr
Match: XP_022946595.1 (transcription factor PRE6-like [Cucurbita moschata] >XP_022999784.1 transcription factor PRE6-like [Cucurbita maxima] >XP_022999785.1 transcription factor PRE6-like [Cucurbita maxima] >KAG6599062.1 Transcription factor PRE6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030000.1 Transcription factor PRE6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 148 bits (374), Expect = 2.71e-44 Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of IVF0014762 vs. NCBI nr
Match: XP_023546056.1 (transcription factor PRE6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147 bits (371), Expect = 7.78e-44 Identity = 84/96 (87.50%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of IVF0014762 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 126.3 bits (316), Expect = 1.3e-29 Identity = 75/94 (79.79%), Postives = 84/94 (89.36%), Query Frame = 0
BLAST of IVF0014762 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 ) HSP 1 Score: 110.5 bits (275), Expect = 7.4e-25 Identity = 67/94 (71.28%), Postives = 80/94 (85.11%), Query Frame = 0
BLAST of IVF0014762 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein ) HSP 1 Score: 107.5 bits (267), Expect = 6.2e-24 Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = 0
BLAST of IVF0014762 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein ) HSP 1 Score: 107.5 bits (267), Expect = 6.2e-24 Identity = 60/96 (62.50%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of IVF0014762 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 ) HSP 1 Score: 105.5 bits (262), Expect = 2.4e-23 Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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