IVF0014745 (gene) Melon (IVF77) v1

Overview


Name	IVF0014745
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NDR1/HIN1-like protein 12
Location	chr05: 2428250 .. 2428525 (-)
RNA-Seq Expression	IVF0014745
Synteny	IVF0014745

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTGACCATTGTTATAAGGAACCCTAACAAGCACTCTTCCATATACTATAACCAATTGATTGAGATGGTGTTGTGTAAGAATCAGCAGATAGAATCACAGATAATGTTGTCTCCGATGATTAGCGAAAAGAATACCACTGTGGACACATCACTGGAGATTAGTGGTGGGGCGGTGTCAGTGGCAAAGGAGTTGGCAAATGAGATGGTGAGAAGTGGGAGTGGATTTTGGCTGAGACTTGTGTTGATGGGAAGAGTTAAATGGAAACTTTGA

mRNA sequence

ATGGCCTTGACCATTGTTATAAGGAACCCTAACAAGCACTCTTCCATATACTATAACCAATTGATTGAGATGGTGTTGTGTAAGAATCAGCAGATAGAATCACAGATAATGTTGTCTCCGATGATTAGCGAAAAGAATACCACTGTGGACACATCACTGGAGATTAGTGGTGGGGCGGTGTCAGTGGCAAAGGAGTTGGCAAATGAGATGGTGAGAAGTGGGAGTGGATTTTGGCTGAGACTTGTGTTGATGGGAAGAGTTAAATGGAAACTTTGA

Coding sequence (CDS)

ATGGCCTTGACCATTGTTATAAGGAACCCTAACAAGCACTCTTCCATATACTATAACCAATTGATTGAGATGGTGTTGTGTAAGAATCAGCAGATAGAATCACAGATAATGTTGTCTCCGATGATTAGCGAAAAGAATACCACTGTGGACACATCACTGGAGATTAGTGGTGGGGCGGTGTCAGTGGCAAAGGAGTTGGCAAATGAGATGGTGAGAAGTGGGAGTGGATTTTGGCTGAGACTTGTGTTGATGGGAAGAGTTAAATGGAAACTTTGA

Protein sequence

MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAVSVAKELANEMVRSGSGFWLRLVLMGRVKWKL

Homology

[Close]

BLAST of IVF0014745 vs. ExPASy TrEMBL
Match: A0A5D3C1N9 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00180 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV
Sbjct: 12  MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 71

Query: 61  SVAKELANEMVRSGSGFWLRLVLMGRVKWKL 92
           SVAKELANEMVRSGSGFWLRLVLMGRVKWKL
Sbjct: 72  SVAKELANEMVRSGSGFWLRLVLMGRVKWKL 102

[Close]

BLAST of IVF0014745 vs. ExPASy TrEMBL
Match: A0A0A0KEK5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421030 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISG--- 60
           MA TIV RNPNK SSIYY+QL  +VL K+QQI  Q+MLSP+I+EK TTV+  L+ISG   
Sbjct: 78  MACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAV 137

Query: 61  GAVSVAKELANEMVRSGSG--FWLRLVLMGRVKWKL 92
            AVSV +ELANE+VRS     FWLR+VLMGRVKWKL
Sbjct: 138 SAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKL 173

[Close]

BLAST of IVF0014745 vs. ExPASy TrEMBL
Match: A0A0A0L882 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-11
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           M  TIV RNPN+  SIYY++L   V  +NQQI SQ++L P+  EK +TV  S  + GGAV
Sbjct: 90  MQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAV 149

Query: 61  SVAKELANEMV--RSGSGFWLRLVLMGRVKWK 91
           +V+ E+AN +V  ++     LR+VL+GR++WK
Sbjct: 150 AVSLEVANGLVTDQTIGVLGLRVVLLGRLRWK 181

[Close]

BLAST of IVF0014745 vs. ExPASy TrEMBL
Match: A0A5D3DAX9 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00030 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           M  TIV RNPN+  SIYY++L   V  +NQQI SQ++L P+  EK +TV  S  + GGAV
Sbjct: 90  MQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAV 149

Query: 61  SVAKELANEMV--RSGSGFWLRLVLMGRVKWK 91
           +V+ E+AN +V  ++     LR+VL+GR++WK
Sbjct: 150 AVSLEVANGLVTDQTIGVLGLRVVLLGRLRWK 181

[Close]

BLAST of IVF0014745 vs. ExPASy TrEMBL
Match: A0A1S3AVC7 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483090 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           M  TIV RNPN+  SIYY++L   V  +NQQI SQ++L P+  EK +TV  S  + GGAV
Sbjct: 90  MQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAV 149

Query: 61  SVAKELANEMV--RSGSGFWLRLVLMGRVKWK 91
           +V+ E+AN +V  ++     LR+VL+GR++WK
Sbjct: 150 AVSLEVANGLVTDQTIGVLGLRVVLLGRLRWK 181

[Close]

BLAST of IVF0014745 vs. NCBI nr
Match: KAA0061643.1 (protein YLS9-like [Cucumis melo var. makuwa] >TYK05863.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 177 bits (448), Expect = 1.50e-55
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV
Sbjct: 12  MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 71

Query: 61  SVAKELANEMVRSGSGFWLRLVLMGRVKWKL 91
           SVAKELANEMVRSGSGFWLRLVLMGRVKWKL
Sbjct: 72  SVAKELANEMVRSGSGFWLRLVLMGRVKWKL 102

[Close]

BLAST of IVF0014745 vs. NCBI nr
Match: XP_004140243.1 (NDR1/HIN1-like protein 26 [Cucumis sativus])

HSP 1 Score: 112 bits (280), Expect = 5.00e-29
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           MA TIV RNPNK SSIYY+QL  +VL K+QQI  Q+MLSP+I+EK TTV+  L+ISG AV
Sbjct: 39  MACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAV 98

Query: 61  S---VAKELANEMVRSGSG--FWLRLVLMGRVKWKL 91
           S   V +ELANE+VRS     FWLR+VLMGRVKWKL
Sbjct: 99  SAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKL 134

[Close]

BLAST of IVF0014745 vs. NCBI nr
Match: KGN47958.1 (hypothetical protein Csa_003254 [Cucumis sativus])

HSP 1 Score: 112 bits (280), Expect = 1.37e-28
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           MA TIV RNPNK SSIYY+QL  +VL K+QQI  Q+MLSP+I+EK TTV+  L+ISG AV
Sbjct: 78  MACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAV 137

Query: 61  S---VAKELANEMVRSGSG--FWLRLVLMGRVKWKL 91
           S   V +ELANE+VRS     FWLR+VLMGRVKWKL
Sbjct: 138 SAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKL 173

[Close]

BLAST of IVF0014745 vs. NCBI nr
Match: XP_038899063.1 (NDR1/HIN1-like protein 12 [Benincasa hispida])

HSP 1 Score: 84.7 bits (208), Expect = 9.40e-18
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           M  TIV RNPN+  SIYY++LI  V  +NQQI SQ+ML P++ EK +TV  S  + GGAV
Sbjct: 91  MQFTIVTRNPNRRVSIYYDRLIAFVSYRNQQITSQVMLPPLVHEKRSTVAMSPVLGGGAV 150

Query: 61  SVAKELANEMVRSGS--GFWLRLVLMGRVKWK 90
           +V+ E+AN +V   +     LR+VL+GR++WK
Sbjct: 151 AVSLEVANGLVTDQAIGVLGLRVVLLGRLRWK 182

[Close]

BLAST of IVF0014745 vs. NCBI nr
Match: XP_004133755.1 (NDR1/HIN1-like protein 12 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 1.09e-15
Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 1   MALTIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAV 60
           M  TIV RNPN+  SIYY++L   V  +NQQI SQ++L P+  EK +TV  S  + GGAV
Sbjct: 90  MQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAV 149

Query: 61  SVAKELANEMVRSGS--GFWLRLVLMGRVKWK 90
           +V+ E+AN +V   +     LR+VL+GR++WK
Sbjct: 150 AVSLEVANGLVTDQTIGVLGLRVVLLGRLRWK 181

[Close]

BLAST of IVF0014745 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 43.9 bits (102), Expect = 8.0e-05
Identity = 27/89 (30.34%), Postives = 50/89 (56.18%), Query Frame = 0


Query: 4   TIVIRNPNKHSSIYYNQLIEMVLCKNQQIESQIMLSPMISEKNTTVDTSLEISGGAVSVA 63
           +++ RNPN+  SI+Y++L   V  K+Q I   + L P+     +TV  +  + G  + V+
Sbjct: 98  SVLARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVS 157

Query: 64  KELANEMVRSGS--GFWLRLVLMGRVKWK 91
            E+AN +    +     +R+V+ GR++WK
Sbjct: 158 PEVANGLKNDEAYGVVLMRVVIFGRLRWK 186

The following BLAST results are available for this feature:

BLAST of IVF0014745 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0014745 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C1N9	1.2e-40	100.00	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G0...	[more]
A0A0A0KEK5	3.6e-21	66.67	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421030 PE=4 ...	[more]
A0A0A0L882	2.6e-11	47.83	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 ...	[more]
A0A5D3DAX9	3.4e-11	47.83	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AVC7	3.4e-11	47.83	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483090 PE=4 SV=1	[more]

BLAST of IVF0014745 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061643.1	1.50e-55	100.00	protein YLS9-like [Cucumis melo var. makuwa] >TYK05863.1 protein YLS9-like [Cucu...	[more]
XP_004140243.1	5.00e-29	66.67	NDR1/HIN1-like protein 26 [Cucumis sativus]	[more]
KGN47958.1	1.37e-28	66.67	hypothetical protein Csa_003254 [Cucumis sativus]	[more]
XP_038899063.1	9.40e-18	50.00	NDR1/HIN1-like protein 12 [Benincasa hispida]	[more]
XP_004133755.1	1.09e-15	47.83	NDR1/HIN1-like protein 12 [Cucumis sativus]	[more]

BLAST of IVF0014745 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01410.1	8.0e-05	30.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 1..90
None	No IPR available	PANTHER	PTHR31415:SF62	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014745.1	IVF0014745.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0009506	plasmodesma