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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTCTCCCTCATCAAATCCCCTCAAATCTCCCTCCTTGCCGCTCTAAGTTCCATTGTTGCGGCTGGGTGTTTCGCTTGCCATTTCATCATTCCGGATCTGATAAGACAGAAACTTTCACCGTTGTCTGCCAATGGTTGCCGATGGAGCTTGATAGGGAGGTATTGGACTCTTTTGAATCCAATTTTTCAATCGATGATGAGTTTAACAATTTATACAAACTGA mRNA sequence ATGTTCTCCCTCATCAAATCCCCTCAAATCTCCCTCCTTGCCGCTCTAAGTTCCATTGTTGCGGCTGGGTGTTTCGCTTGCCATTTCATCATTCCGGATCTGATAAGACAGAAACTTTCACCGTTGTCTGCCAATGGTTGCCGATGGAGCTTGATAGGGAGGTATTGGACTCTTTTGAATCCAATTTTTCAATCGATGATGAGTTTAACAATTTATACAAACTGA Coding sequence (CDS) ATGTTCTCCCTCATCAAATCCCCTCAAATCTCCCTCCTTGCCGCTCTAAGTTCCATTGTTGCGGCTGGGTGTTTCGCTTGCCATTTCATCATTCCGGATCTGATAAGACAGAAACTTTCACCGTTGTCTGCCAATGGTTGCCGATGGAGCTTGATAGGGAGGTATTGGACTCTTTTGAATCCAATTTTTCAATCGATGATGAGTTTAACAATTTATACAAACTGA Protein sequence MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIGRYWTLLNPIFQSMMSLTIYTN
Homology
BLAST of IVF0014692 vs. ExPASy TrEMBL
Match: A0A5A7VIF4 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G001370 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.6e-21 Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0
Query: 1 MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIGRYWT 58
MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG +++
Sbjct: 1 MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIGSFFS 57
BLAST of IVF0014692 vs. ExPASy TrEMBL
Match: A0A5D3CTK5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00500 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query: 1 MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG 54
MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG
Sbjct: 1 MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG 53
BLAST of IVF0014692 vs. NCBI nr
Match: KAA0066136.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 111 bits (277), Expect = 9.87e-30 Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0
Query: 1 MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIGRYWT 57
MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG +++
Sbjct: 1 MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIGSFFS 57
BLAST of IVF0014692 vs. NCBI nr
Match: TYK15181.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (273), Expect = 4.92e-29 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query: 1 MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG 53
MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG
Sbjct: 1 MFSLIKSPQISLLAALSSIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG 53
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VIF4 | 6.6e-21 | 92.98 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
| A0A5D3CTK5 | 1.9e-20 | 100.00 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0066136.1 | 9.87e-30 | 92.98 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
| TYK15181.1 | 4.92e-29 | 100.00 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | PROSITE | PS51257 | PROKAR_LIPOPROTEIN | coord: 1..24
score: 5.0 |
Relationships
The following mRNA feature(s) are a part of this gene:
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