IVF0014690 (gene) Melon (IVF77) v1

Overview


Name	IVF0014690
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Major pollen allergen Ole e 6-like
Location	chr07: 21289663 .. 21290585 (-)
RNA-Seq Expression	IVF0014690
Synteny	IVF0014690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATACGATCAACCCATAAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGAAGATATGTTTTTTTTTTTTTTAATCAAGACGATAAATAGTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTGTTATGGAAATTAGTGAGTTTTAGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGACGCTAGAATTTGAAGGGATATGACACAATTGAAATTTTAGAATGAAAACTCATGTCAAAATTTAACGAAAATTTAGTTGTTTATTTCTCCCAACTTATTGATCGTTTTCTTTTTATTTGTGTGTTAACTTCGATTTTTTATTCGTCTGTTTTGCAGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTCTCTTTCATTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAATTTTTGTGTTTGTTCACAT

mRNA sequence

CTCATACGATCAACCCATAAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTCTCTTTCATTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAATTTTTGTGTTTGTTCACAT

Coding sequence (CDS)

ATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETCEKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN

Homology

[Close]

BLAST of IVF0014690 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-44
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
           MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1   MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61  EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN 100
            KACIAKD ANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61  AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]

BLAST of IVF0014690 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 89
          EKACIAKDGANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of IVF0014690 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-04
Identity = 38/96 (39.58%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    VF MCI VVV +LQF  A+   E D   +  +K           ++KSC ETC
Sbjct: 1  MAKKMMAVFLMCI-VVVATLQFVMAN---EEDGVTKYEAKF--------DAKYKSCYETC 60

Query: 61 EKACIAKD-GANTSCHSTCDKDCMKKEVVDKISDKL 96
          EK C+  D    + C   CD+DC +KE  DK+  +L
Sbjct: 61 EKECLRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

[Close]

BLAST of IVF0014690 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.4e-04
Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MA     +F MCI VVV +LQF+ A+       E +  +K            +KSC ETC
Sbjct: 1  MANKMIALFLMCI-VVVAALQFANANKEDVAKYEAKFDAK------------YKSCFETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 96
          EK C+      + C   CD+DC +KE  DK+  +L
Sbjct: 61 EKECLRYGSGQSYCEVKCDEDCDEKEAADKLHIEL 82

[Close]

BLAST of IVF0014690 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (473), Expect = 2.92e-59
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99
           KACIAKD ANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]

BLAST of IVF0014690 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 171 bits (433), Expect = 3.17e-53
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88
          EKACIAKDGANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of IVF0014690 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 5.41e-15
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQ-SEISSVMPQFKSCVETCE 62
           K   VVFFMCIVV+ GSLQFS+A  TA    +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCIVVM-GSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDGANTSCHSTCDKDCMKKEV 87
           K C AK  AN SCH  C+ DC +K +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTI 104

[Close]

BLAST of IVF0014690 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.7 bits (169), Expect = 4.03e-13
Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TA++ TE+E + K   S+  +V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 95
          +K C      N SC S CD DC KKEV +K   K+
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEVENKFKIKI 85

[Close]

BLAST of IVF0014690 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.6 bits (166), Expect = 1.27e-12
Identity = 42/95 (44.21%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V++V +LQFS AD  AE    +E R K    ++S V  + KSC  TC
Sbjct: 1  MAKKMMAVLLMC-VLLVSALQFSTADSPAE----MEARFKSFFGDLSGVEAKLKSCAATC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 95
          EK C+AK   + SC   C+ DC KKEV +K +  L
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90

The following BLAST results are available for this feature:

BLAST of IVF0014690 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0014690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3F9	5.7e-44	94.95	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7SXV7	1.4e-39	98.86	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A0A0K9Z9	1.5e-04	39.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]
A0A0A0KPA7	4.4e-04	35.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]

BLAST of IVF0014690 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036015.1	2.92e-59	94.95	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAA0035393.1	3.17e-53	98.86	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAE8637567.1	5.41e-15	47.67	hypothetical protein CSA_017844, partial [Cucumis sativus]	[more]
KAG6595593.1	4.03e-13	45.26	hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595587.1	1.27e-12	44.21	hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0014690 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 51..95 e-value: 2.1E-10 score: 42.0
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 52..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014690.1	IVF0014690.1	mRNA