IVF0014687 (gene) Melon (IVF77) v1

Overview
NameIVF0014687
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolyprotein
Locationchr01: 15501355 .. 15501724 (-)
RNA-Seq ExpressionIVF0014687
SyntenyIVF0014687
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTTTGTTGGAGCTACAACGCAACATCATATCCTCAATACAAGATGTTGATCAAGAATCTTAAAATCAAGTGGTGGAAAAATTACAATTTTTAGCATGCCACCATTAAATGTATAAAGGAATGGTTTGCTGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGATAGATCAAAGCTTCTTGCAGCACTCGCTCAGGCCACAACTGATGCAGATTTTCAGAGGTTATTATCAACAACAGTAAATGCTTCTTCATCTTCAAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAGTAGACCTAGAATATGATCTAGATGATCCATATCTTGACTCATAG

mRNA sequence

ATGGATGTTTTGTTGGAGCTACAACGCAACATCATATCCTCAATACAAGATCATGCCACCATTAAATGTATAAAGGAATGGTTTGCTGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGATAGATCAAAGCTTCTTGCAGCACTCGCTCAGGCCACAACTGATGCAGATTTTCAGAGGTTATTATCAACAACAGTAAATGCTTCTTCATCTTCAAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAGTAGACCTAGAATATGATCTAGATGATCCATATCTTGACTCATAG

Coding sequence (CDS)

ATGGATGTTTTGTTGGAGCTACAACGCAACATCATATCCTCAATACAAGATCATGCCACCATTAAATGTATAAAGGAATGGTTTGCTGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGATAGATCAAAGCTTCTTGCAGCACTCGCTCAGGCCACAACTGATGCAGATTTTCAGAGGTTATTATCAACAACAGTAAATGCTTCTTCATCTTCAAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAGTAGACCTAGAATATGATCTAGATGATCCATATCTTGACTCATAG

Protein sequence

MDVLLELQRNIISSIQDHATIKCIKEWFAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS
Homology
BLAST of IVF0014687 vs. ExPASy TrEMBL
Match: A0A5A7SWC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00570 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.1e-32
Identity = 81/89 (91.01%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 18  HATIKCIKEWFAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLSTTVNASS 77
           HATIK IKEWFAENKYLQDIDQRKNVEFLND+SKLL ALAQATTDADFQRLLST VNASS
Sbjct: 18  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASS 77

Query: 78  SSKSPSSSIQEDEEQVDLEYDLDDPYLDS 107
           SSKSPSSSIQEDEEQ+D EYDLDD  LDS
Sbjct: 78  SSKSPSSSIQEDEEQIDPEYDLDD--LDS 104

BLAST of IVF0014687 vs. ExPASy TrEMBL
Match: A0A5A7SNT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001890 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.2e-29
Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 0

Query: 18  HATIKCIKEWFAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLSTTVNASS 77
           HATIK IKEWF EN YLQDIDQ KNV+FLN++SKLLA LAQATTDADFQRLL TTVNAS+
Sbjct: 53  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 112

Query: 78  SSKSPSSSIQEDEEQVDLEYDLDDPYLDS 107
           SSKS SS +QEDEEQVD EYDLD+P+LDS
Sbjct: 113 SSKSTSSFLQEDEEQVDPEYDLDNPFLDS 141

BLAST of IVF0014687 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.4e-21
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0

Query: 28  FAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQ 87
           + +N  LQDIDQRKN +FLND+ K LAAL QAT DADFQRLLST VN SSSSK   S IQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 88  EDEEQVDLEYDLDDPYLDS 107
           EDEEQVDLEYDLDDP+LDS
Sbjct: 199 EDEEQVDLEYDLDDPFLDS 217

BLAST of IVF0014687 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.3e-19
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 49  RSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS 107
           RSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS
Sbjct: 113 RSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS 170

BLAST of IVF0014687 vs. ExPASy TrEMBL
Match: A0A0A0KYU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.8e-17
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 0

Query: 15 IQDHATIKCIKEWFAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLST 72
          I++HATIK +KEWFAEN YLQDIDQRKN+EFLND+SKLLA LAQATTD +FQRLLST
Sbjct: 18 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLST 74

BLAST of IVF0014687 vs. NCBI nr
Match: KAA0034823.1 (hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (371), Expect = 1.78e-43
Identity = 78/84 (92.86%), Postives = 80/84 (95.24%), Query Frame = 0

Query: 18  HATIKCIKEWFAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLSTTVNASS 77
           HATIK IKEWFAENKYLQDIDQRKNVEFLND+SKLL ALAQATTDADFQRLLST VNASS
Sbjct: 18  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASS 77

Query: 78  SSKSPSSSIQEDEEQVDLEYDLDD 101
           SSKSPSSSIQEDEEQ+D EYDLDD
Sbjct: 78  SSKSPSSSIQEDEEQIDPEYDLDD 101

BLAST of IVF0014687 vs. NCBI nr
Match: KAA0025901.1 (hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (345), Expect = 5.01e-39
Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 0

Query: 18  HATIKCIKEWFAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLSTTVNASS 77
           HATIK IKEWF EN YLQDIDQ KNV+FLN++SKLLA LAQATTDADFQRLL TTVNAS+
Sbjct: 53  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 112

Query: 78  SSKSPSSSIQEDEEQVDLEYDLDDPYLDS 106
           SSKS SS +QEDEEQVD EYDLD+P+LDS
Sbjct: 113 SSKSTSSFLQEDEEQVDPEYDLDNPFLDS 141

BLAST of IVF0014687 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 109 bits (272), Expect = 6.29e-27
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0

Query: 28  FAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQ 87
           + +N  LQDIDQRKN +FLND+ K LAAL QAT DADFQRLLST VN SSSSK   S IQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 88  EDEEQVDLEYDLDDPYLDS 106
           EDEEQVDLEYDLDDP+LDS
Sbjct: 199 EDEEQVDLEYDLDDPFLDS 217

BLAST of IVF0014687 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (258), Expect = 1.61e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 49  RSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS 106
           RSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS
Sbjct: 113 RSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS 170

BLAST of IVF0014687 vs. NCBI nr
Match: XP_031739746.1 (uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetical protein Csa_012459 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 3.09e-24
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 0

Query: 15 IQDHATIKCIKEWFAENKYLQDIDQRKNVEFLNDRSKLLAALAQATTDADFQRLLST 71
          I++HATIK +KEWFAEN YLQDIDQRKN+EFLND+SKLLA LAQATTD +FQRLLST
Sbjct: 25 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLST 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SWC04.1e-3291.01Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SNT54.2e-2982.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BI619.4e-2175.95Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U8A02.3e-19100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KYU04.8e-1782.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0034823.11.78e-4392.86hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa][more]
KAA0025901.15.01e-3982.02hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa][more]
TYJ98361.16.29e-2775.95hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa][more]
KAA0049709.11.61e-25100.00hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa][more]
XP_031739746.13.09e-2482.46uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetica... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0014687.1IVF0014687.1mRNA