IVF0014644 (gene) Melon (IVF77) v1

Overview
NameIVF0014644
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionrRNA 2'-O-methyltransferase fibrillarin 2
Locationchr05: 23754682 .. 23759488 (+)
RNA-Seq ExpressionIVF0014644
SyntenyIVF0014644
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATCCCTCGCCACACGATTTCTTCCCTCTCCTTATCAATTTCTTCCATCTCTTCTCAATCTCATTTTCAACCTCTTCTCCGACGAATAGTCACCGCGCACACAATCGTCGTCCCTCGTGTCCAGCCATCGCCGCGTCTGTTACTGTTGTGCTCGTTCGTTGTCTGTTCACAGTCCTCATTCCTCACGTTTGCGCGTTCGTGCCTGCCCTCGCTACCACCGTTCCTAGCCCTTTCGTCGACCATTAGCTGCTAAAAAGCTTTTCCCACTCTTTCACGACTTCATCGATGTTCTTTCTTCTCGTTCTTGCTGTGAAATCTCATTTTCAATACTTCAATCCTTTTTTTTCTTCCGTACAAAATTGGAGAACATAGTTTCATCCCAGGTTAGGGATTTTCTTTTATGTTAAAGCACTTGAGTGTGGTTTTATCCTTTTAGGTTTAATATATACATATGTTCCCTTAACTCTGGAAATTGCTGAGCTTTCTTTTAGGTTTATTCTTTTATGGAACTGAACGCAACTGCTGAGCTTTCCTATTGGAGACGTTCGTATGGATTGTTTTACGAACGTTTTTCCAACGTTTTACTATTGTTTTTCCAACTTTCCTATTGGAAAAAGCATCATCAGCGCATGAATTGTTTTACATGAGGAACAGAATGTTGAAGGAAGGAGATAGGAGACGTTCGTACCTTTTACCAATTGAATAAAGAACAATTGAATAAACTAGAAACCTGTATCTAATTTTGAATAAACCTTTTACCAATTTTGGCTTTAAAATGTACTTTTTTTTTTAATTATTATTGTTATGTTTGAACTGTAGAAACCTGGTGCTCGAGTGTTATATCTAGGTGCTGCGTCTGGGACTACCGTATCTCATGTCTCTGATGTTGTTGGCCCTGTAAGTAGTTAGTTATAGAGTATATGTAGTAGTATTTTATAAAATGATGGTGCCCTTAACTGTTGCTTTGGTTTGCAGACTGGTATTGTGTATGCCATGGAATTCTCTCATAGAAGTGGTAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTCTCTGATGTTGCTCAGCCAGATCAGGTTCACCTCTTTTGCTTCTTCTGGATGGTCTTATTATTTCTGTATGTTAGAAGCGCCACTTTTGTTGAAACTGATGGCATGGCTCTATGATTTTTTGAAAGTATGTACTTACCGTTATTTTTCCTTTTATCTGATTAATCTTCTTGGAAGTGGTAGGTGCGATGCAATTCACTTTTAGTATATTGTTTTCAACTCTGGTTTTTTTTTTTTTTTTTTTTATATAATTGGATTTGTTGTTTATCTTTTGTAATTTTCTTTAGGGTTTTTACTCTTGGCTCGAAGCTTTTTTTTTTTTTTTTTCCCTTTTGTCTTATTCCCATTGGTATAGTTAGTTGAGTTACTGGGCTGTTGGAAGTTCTTTTCTTCCTCTTCCCTTTTGTCTTCTGTCTTTCATTTCTCTTAAGCTGTTTTTCTTATAAAAAAATACTATATATCTTGGGTTTTTTTTCAAATTCCTTTGGGTTCAAATTATTAAGCATATGACGAAATACTCGGATTCCCCTTCAAGACTTCTTGAATGATGCAACTTTCGAGTGTCCGATGCTTCCAGAAAGCTCACCTCTCTATTTTCTTCATTTTGATTAGTTCTGAAATTATATTTTCCTCATACTTCTCACCGTGTTTTCCTTTACCAATTTTGTTTTCATTGTTTTATAATGTTTTCCAAATAGATGCTATCAAACCAATCAAGCATTCTTGTTTATGTTATAGATCCCTTGCCGCTTCTGATCGGATTGGAGATTTTAAGTTACATTTCATTCTTCCTATTACTTTCATTGAAGTTCTTTTTTTGTTATTCTTTTTTTTTTCATTGCCATGTCATTGTTGGTTGGATTGGAAACATCTGTTTTTTAGTCAGTAATCTTTTCCCCATTTATTGTTCTCTCAGCATTTATAGCAATTGATTCTGAATTTGAGTCTTCAATACTAGTCATAACACCATTATTCTCACCTGTACATTAGGACATTTTCATACTCACATCTGCCATCGTATACCTCTTTTTGGGTATGTTCGAAAGCCATGATCTTTACTAATTATTTTTGGAATCAGATGATGAATCTAATTATATCAACCACTCTGTGGGTTATTCAAGATGTGCTCTCTTTCTATAGAACCTAATCTGTCTAAATCATCCCTCTTTATAAAACATTTCATAGTTTTCCAACTATTATATTGTTCTTACTTTATACATCATTATTTATTTGCGACAGTGATCTACTTTGGATCTTATTATATGGTAAGTTCAGATCTGGAGGCTTAGATTCTCTATGTAGGTTCTTTATTACTTATTTGTTGTTTAGTTATGTGATTGTACTACATACCTATTTATTCATATTTTTGGTCATCCTGCAAGTATTGTTCAAATGGGCATTATGCTATTTATCTGCCCACGTTTTTACATTTTGGGCTCTTTCTATTTGCTAAGCATGTGATGAATTACTCGGATTCCCCTTCAAGACATTTAGAGTGATGCACAACCCGAGTATCTGATGCAACCAAGTACATCTTGTTTTGATATAACCCTTCATTGGTTACCAAATTTGGATTTTGGCTGGGCAAATTCTTTTCTGACTTGAACTTCTAGTGTTTTCTTATGCGTTTAATCCTCCCTTCAATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGTGAGTCACAGTCAACTTTTTGATAAAAGTGAAAGATGGTATAGTATAACCCATACACCCAAAGATGATTTGTTTTATATTTAACTTTGTAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGTAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAGTTTATACAATAGGATTTGGTAAAAGGTAGTTTATACAATACTGTAGTTTTCCAACCAGAATGATGTTTCATCAATCTGATAGTGTACTGAGTTTCCTTTTACCAATTGAATAAAGAACAATCTATTGCTATCAATAATTCATGGTTATATAGCTCTGAGCTAATCAAGATCAAAGCTTCCTGCTGGTGTTCCCTCCCAAAAGCTATTGCGGGCTATTCTTTCCTAGATATTTCCAACAATTGGGTTTTTTTTTGGTAAATTTGTGTTTTGTTCCTTTATCTTGTGTACATTTTTGCTTTCTATTGTCTCTTTTCAATCACCTTGTTAGCCTGTTTTTACTCTTATCTTGTACTCATTTCTTAATTAATGAGAAATGTTGTTTCCTTTATAAGATATAGATTTTCCATATTATTGCTAAAGCTCATTTCTGTCCTTGATTAATCTAAATCTGGTTTCCCTTTTATAAAATTTCTATGCAGACTAGCACACAAGAATTTTGTGATATATTCCCCTTGCTTTATGATAATGTTTTGACTTAAAGTTAATTCTGTAATGATGCTAAGTACAGTATTTTTGCCTCTATATTATTCTTAAAGGCCATTACTGCTTTGAAGAAAGGAGCCTACTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGTCCTTTCCGACTTTCCAATGTGAGTAGTCTTGTTTCTCCAGATGAAAAAGGAATACAAAAGCATACTAGTGTGTAATGTTTAAGTGCATAACTCTACGACTACTTGTATTTGTATTATCTTTTATTTCATTTAATTATCACATGTTTGAGAGTGATTATGAAATGATTAAAATTACTCTTGTCATTTTCAAAATCAGTTGAAAAGTTCTTTTAATCATTCCAAAATTCAAATCAATTTTAAATAGTATGGAATTCTGTTTGAAAGTGTAAAATTGAATATTGAATTGATTTTGAGTAGGTGAGTTTCATAGTGATTTTAAACATGACAAATTGATTTTAATCATTTCAAAATCACTCCCAAACATGTCCCTGGCAGTAAACCTATGGATTTCTCTTGAGGCGTAATTTTTTAAAACCTATTTTGTGGATATATCCATGATCTGAATCAAAGTGGTCAAATATTGATAAATTTTCCTGATTTCATTGGCTAATCTAGCACAGCCAATGAAATCAGACAACTTTTACTCTTTGAAGGAAGGTTGTTGCCAAAGTGTATAAATTTTGCCTTTGAAAGATGGCTCGAACTAGGTATGATTGATTCAAGCCAACTTGTGTAGCTTCTTTTAAGTTCCTCTGGCAGTGAAGTTGGTGCTTCTACTTCCCTCTCTTTGTTGGGTTAAATATAATATTCCGATGTAAAGAATTATCATACTTTCATGCATCAAAGGAAGTAAGACTTCAATAGTTTGGTTAGTGTGAAGTGAGGGATAAAACTTGGCCGGAAAGTACCTATTGCAAGTATGGACAATAGTGGAAAGATAACATGGGCTAAGCATAATGAAATTCAAACAGTAAACATCAAAAGTGTGGGAGCAGACTTTGAGGTTTGGAATGGTTTTATTTGTAACCTTTTATTGATCATTAAATTGTTTCTGGTGTGGCCTTAGTTGTGTGCTTTTTTTGCTTCATAGGTTACTGATGGAGAGAGATTGCCTTTAGCTGTTAAGGAGATGGGAACTTGTGATCTTTA

mRNA sequence

CGATCCCTCGCCACACGATTTCTTCCCTCTCCTTATCAATTTCTTCCATCTCTTCTCAATCTCATTTTCAACCTCTTCTCCGACGAATAGTCACCGCGCACACAATCGTCGTCCCTCGTGTCCAGCCATCGCCGCGTCTGTTACTGTTGTGCTCGTTCGTTGTCTGTTCACAGTCCTCATTCCTCACGTTTGCGCGTTCGTGCCTGCCCTCGCTACCACCGTTCCTAGCCCTTTCGTCGACCATTAGCTGCTAAAAAGCTTTTCCCACTCTTTCACGACTTCATCGATGTTCTTTCTTCTCGTTCTTGCTGTGAAATCTCATTTTCAATACTTCAATCCTTTTTTTTCTTCCGTACAAAATTGGAGAACATAGTTTCATCCCAGAAACCTGGTGCTCGAGTGTTATATCTAGGTGCTGCGTCTGGGACTACCGTATCTCATGTCTCTGATGTTGTTGGCCCTACTGGTATTGTGTATGCCATGGAATTCTCTCATAGAAGTGGTAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTCTCTGATGTTGCTCAGCCAGATCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGTAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAGTTTATACAATAGGATTTGGTAAAAGGTAGTTTATACAATACTGTAGTTTTCCAACCAGAATGATGTTTCATCAATCTGATAGTGTACTGAGTTTCCTTTTACCAATTGAATAAAGAACAATCTATTGCTATCAATAATTCATGGTTATATAGCTCTGAGCTAATCAAGATCAAAGCTTCCTGCTGGTGTTCCCTCCCAAAAGCTATTGCGGGCTATTCTTTCCTAGATATTTCCAACAATTGGGTTTTTTTTTGGTAAATTTGTGTTTTGTTCCTTTATCTTGTGTACATTTTTGCTTTCTATTGTCTCTTTTCAATCACCTTGTTAGCCTGTTTTTACTCTTATCTTGTACTCATTTCTTAATTAATGAGAAATGTTGTTTCCTTTATAAGATATAGATTTTCCATATTATTGCTAAAGCTCATTTCTGTCCTTGATTAATCTAAATCTGGTTTCCCTTTTATAAAATTTCTATGCAGACTAGCACACAAGAATTTTGTGATATATTCCCCTTGCTTTATGATAATGTTTTGACTTAAAGTTAATTCTGTAATGATGCTAAGTACAGTATTTTTGCCTCTATATTATTCTTAAAGGCCATTACTGCTTTGAAGAAAGGAGCCTACTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGTCCTTTCCGACTTTCCAATGTGAGTAGTCTTGTTTCTCCAGATGAAAAAGGAATACAAAAGCATACTAGTGTGTAATGTTTAAGTGCATAACTCTACGACTACTTGTATTTGTATTATCTTTTATTTCATTTAATTATCACATGTTTGAGAGTGATTATGAAATGATTAAAATTACTCTTGTCATTTTCAAAATCAGTTGAAAAGTTCTTTTAATCATTCCAAAATTCAAATCAATTTTAAATAGTATGGAATTCTGTTTGAAAGTGTAAAATTGAATATTGAATTGATTTTGAGTAGGTGAGTTTCATAGTGATTTTAAACATGACAAATTGATTTTAATCATTTCAAAATCACTCCCAAACATGTCCCTGGCAGTAAACCTATGGATTTCTCTTGAGGCGTAATTTTTTAAAACCTATTTTGTGGATATATCCATGATCTGAATCAAAGTGGTCAAATATTGATAAATTTTCCTGATTTCATTGGCTAATCTAGCACAGCCAATGAAATCAGACAACTTTTACTCTTTGAAGGAAGGTTGTTGCCAAAGTGTATAAATTTTGCCTTTGAAAGATGGCTCGAACTAGGTATGATTGATTCAAGCCAACTTGTGTAGCTTCTTTTAAGTTCCTCTGGCAGTGAAGTTGGTGCTTCTACTTCCCTCTCTTTGTTGGGTTAAATATAATATTCCGATGTAAAGAATTATCATACTTTCATGCATCAAAGGAAGTAAGACTTCAATAGTTTGGTTAGTGTGAAGTGAGGGATAAAACTTGGCCGGAAAGTACCTATTGCAAGTATGGACAATAGTGGAAAGATAACATGGGCTAAGCATAATGAAATTCAAACAGTAAACATCAAAAGTGTGGGAGCAGACTTTGAGGTTTGGAATGGTTTTATTTGTAACCTTTTATTGATCATTAAATTGTTTCTGGTGTGGCCTTAGTTGTGTGCTTTTTTTGCTTCATAGGTTACTGATGGAGAGAGATTGCCTTTAGCTGTTAAGGAGATGGGAACTTGTGATCTTTA

Coding sequence (CDS)

ATGGAATTCTCTCATAGAAGTGGTAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTCTCTGATGTTGCTCAGCCAGATCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGTAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG

Protein sequence

MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAA
Homology
BLAST of IVF0014644 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 241.9 bits (616), Expect = 4.2e-63
Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 185 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 244

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLK+GGHFVISIKANCIDSTVPAE VF +EV KL+ +QFKP EQVTLEPFERDHACV
Sbjct: 245 ASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERDHACV 304

Query: 121 VGIYRAPKKQKAA 134
           VG YR PKK KAA
Sbjct: 305 VGGYRMPKKPKAA 317

BLAST of IVF0014644 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 4.6e-62
Identity = 119/134 (88.81%), Postives = 123/134 (91.79%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 174 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           AS+FLK GGHFVISIKANCIDSTV AE VF SEV KL+ +QFKP EQVTLEPFERDHACV
Sbjct: 234 ASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACV 293

Query: 121 VGIYRAPKKQKAAA 135
           VG YR PKKQK  A
Sbjct: 294 VGGYRMPKKQKTPA 307

BLAST of IVF0014644 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.5e-54
Identity = 101/130 (77.69%), Postives = 115/130 (88.46%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALN
Sbjct: 216 VEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALN 275

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           A +FLK GGHFVISIKA+CIDST   E VFASEV K++AD+ KP EQ+TLEP+ERDHA V
Sbjct: 276 AQHFLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEPYERDHAVV 335

Query: 121 VGIYRAPKKQ 131
           VG+YR P KQ
Sbjct: 336 VGVYRPPPKQ 345

BLAST of IVF0014644 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.9e-54
Identity = 100/130 (76.92%), Postives = 115/130 (88.46%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALN
Sbjct: 215 VEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALN 274

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           A +FLK GGHFVISIKA+CIDST   E VFA+EV K++AD+ KP EQ+TLEP+ERDHA V
Sbjct: 275 AQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEPYERDHAVV 334

Query: 121 VGIYRAPKKQ 131
           VG+YR P KQ
Sbjct: 335 VGVYRPPPKQ 344

BLAST of IVF0014644 vs. ExPASy Swiss-Prot
Match: Q80WS3 (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus OX=10090 GN=Fbll1 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.9e-53
Identity = 98/131 (74.81%), Postives = 115/131 (87.79%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALN
Sbjct: 184 VEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALN 243

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           A  FL+ GGHF+ISIKANCIDST  AE VFASEV KL+ +  KP EQ+TLEP+ERDHA V
Sbjct: 244 AHTFLRNGGHFLISIKANCIDSTASAEAVFASEVRKLQQENLKPQEQLTLEPYERDHAVV 303

Query: 121 VGIYRAPKKQK 132
           VG+YR P K K
Sbjct: 304 VGVYRPPPKSK 314

BLAST of IVF0014644 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 171 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 230

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 231 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 290

Query: 121 VGIYRAPKKQKAAA 135
           VGIYRAPKKQKAAA
Sbjct: 291 VGIYRAPKKQKAAA 304

BLAST of IVF0014644 vs. ExPASy TrEMBL
Match: A0A0A0L9V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 174 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 234 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 293

Query: 121 VGIYRAPKKQKAAA 135
           VGIYRAPKKQKAAA
Sbjct: 294 VGIYRAPKKQKAAA 307

BLAST of IVF0014644 vs. ExPASy TrEMBL
Match: A0A0A0KLF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 174 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 234 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 293

Query: 121 VGIYRAPKKQKAAA 135
           VGIYRAPKKQKAAA
Sbjct: 294 VGIYRAPKKQKAAA 307

BLAST of IVF0014644 vs. ExPASy TrEMBL
Match: A0A6J1E4P7 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita moschata OX=3662 GN=LOC111430753 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 171 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 230

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 231 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 290

Query: 121 VGIYRAPKKQKAAA 135
           VGIYRAPKKQKAAA
Sbjct: 291 VGIYRAPKKQKAAA 304

BLAST of IVF0014644 vs. ExPASy TrEMBL
Match: A0A1S3AY25 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103484122 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 172 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 231

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 232 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 291

Query: 121 VGIYRAPKKQKAAA 135
           VGIYRAPKKQKAAA
Sbjct: 292 VGIYRAPKKQKAAA 305

BLAST of IVF0014644 vs. NCBI nr
Match: KGN57431.2 (hypothetical protein Csa_009607 [Cucumis sativus])

HSP 1 Score: 264 bits (675), Expect = 9.66e-87
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 151 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 210

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 211 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 270

Query: 121 VGIYRAPKKQKAAA 134
           VGIYRAPKKQKAAA
Sbjct: 271 VGIYRAPKKQKAAA 284

BLAST of IVF0014644 vs. NCBI nr
Match: TYK00283.1 (putative mediator of RNA polymerase II transcription subunit 36b [Cucumis melo var. makuwa])

HSP 1 Score: 263 bits (671), Expect = 1.02e-86
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 112 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 171

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 172 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 231

Query: 121 VGIYRAPKKQKAAA 134
           VGIYRAPKKQKA A
Sbjct: 232 VGIYRAPKKQKAVA 245

BLAST of IVF0014644 vs. NCBI nr
Match: XP_022922917.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata])

HSP 1 Score: 264 bits (675), Expect = 1.72e-86
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 171 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 230

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 231 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 290

Query: 121 VGIYRAPKKQKAAA 134
           VGIYRAPKKQKAAA
Sbjct: 291 VGIYRAPKKQKAAA 304

BLAST of IVF0014644 vs. NCBI nr
Match: XP_022984980.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima] >KAG7014755.1 Mediator of RNA polymerase II transcription subunit 36a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264 bits (675), Expect = 1.72e-86
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 171 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 230

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 231 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 290

Query: 121 VGIYRAPKKQKAAA 134
           VGIYRAPKKQKAAA
Sbjct: 291 VGIYRAPKKQKAAA 304

BLAST of IVF0014644 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264 bits (675), Expect = 1.78e-86
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 172 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 231

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLKAGGHFVISIKANCIDSTVPAE VFASEVNKLKADQFKPTEQVTLEPFERDHACV
Sbjct: 232 ASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACV 291

Query: 121 VGIYRAPKKQKAAA 134
           VGIYRAPKKQKAAA
Sbjct: 292 VGIYRAPKKQKAAA 305

BLAST of IVF0014644 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 241.9 bits (616), Expect = 3.0e-64
Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 185 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 244

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLK+GGHFVISIKANCIDSTVPAE VF +EV KL+ +QFKP EQVTLEPFERDHACV
Sbjct: 245 ASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERDHACV 304

Query: 121 VGIYRAPKKQKAA 134
           VG YR PKK KAA
Sbjct: 305 VGGYRMPKKPKAA 317

BLAST of IVF0014644 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 238.4 bits (607), Expect = 3.3e-63
Identity = 119/134 (88.81%), Postives = 123/134 (91.79%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
Sbjct: 174 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           AS+FLK GGHFVISIKANCIDSTV AE VF SEV KL+ +QFKP EQVTLEPFERDHACV
Sbjct: 234 ASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACV 293

Query: 121 VGIYRAPKKQKAAA 135
           VG YR PKKQK  A
Sbjct: 294 VGGYRMPKKQKTPA 307

BLAST of IVF0014644 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 174.9 bits (442), Expect = 4.4e-44
Identity = 86/129 (66.67%), Postives = 104/129 (80.62%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 60
           +E S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LN
Sbjct: 164 VEHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLN 223

Query: 61  ASYFLKAGGHFVISIKANCIDSTVPAEVVFASEVNKLKADQFKPTEQVTLEPFERDHACV 120
           ASYFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ ++ +PTE + L+  E  HACV
Sbjct: 224 ASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACV 283

Query: 121 VGIYRAPKK 130
            G YR P+K
Sbjct: 284 FGGYRLPRK 292

BLAST of IVF0014644 vs. TAIR 10
Match: AT5G52470.2 (fibrillarin 1 )

HSP 1 Score: 108.6 bits (270), Expect = 3.9e-24
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1   MEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 54
           +EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
Sbjct: 174 VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94AH94.2e-6390.23rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB... [more]
Q9FEF84.6e-6288.81rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB... [more]
Q8I1F43.5e-5477.69rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3... [more]
Q9W1V37.9e-5476.92rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi... [more]
Q80WS33.9e-5374.81rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus OX=1... [more]
Match NameE-valueIdentityDescription
A0A6J1JA272.9e-6798.51probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma... [more]
A0A0A0L9V72.9e-6798.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1[more]
A0A0A0KLF92.9e-6798.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1[more]
A0A6J1E4P72.9e-6798.51probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita mo... [more]
A0A1S3AY252.9e-6798.51mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=... [more]
Match NameE-valueIdentityDescription
KGN57431.29.66e-8798.51hypothetical protein Csa_009607 [Cucumis sativus][more]
TYK00283.11.02e-8697.76putative mediator of RNA polymerase II transcription subunit 36b [Cucumis melo v... [more]
XP_022922917.11.72e-8698.51probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita mosc... [more]
XP_022984980.11.72e-8698.51probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxi... [more]
XP_023552409.11.78e-8698.51mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub... [more]
Match NameE-valueIdentityDescription
AT4G25630.13.0e-6490.23fibrillarin 2 [more]
AT5G52470.13.3e-6388.81fibrillarin 1 [more]
AT5G52490.14.4e-4466.67Fibrillarin family protein [more]
AT5G52470.23.9e-2498.11fibrillarin 1 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000692FibrillarinPRINTSPR00052FIBRILLARINcoord: 21..50
score: 70.24
coord: 103..124
score: 61.36
coord: 51..80
score: 67.62
IPR000692FibrillarinSMARTSM01206Fibrillarin_2coord: 1..126
e-value: 4.2E-54
score: 195.7
IPR000692FibrillarinPFAMPF01269Fibrillarincoord: 1..125
e-value: 2.5E-58
score: 196.9
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 1..126
e-value: 3.1E-53
score: 181.9
NoneNo IPR availablePANTHERPTHR10335:SF22FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATEDcoord: 1..133
NoneNo IPR availablePANTHERPTHR10335RRNA 2-O-METHYLTRANSFERASE FIBRILLARINcoord: 1..133
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 2..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0014644.3IVF0014644.3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000494 box C/D RNA 3'-end processing
biological_process GO:1990258 histone glutamine methylation
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0007020 microtubule nucleation
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0031167 rRNA methylation
biological_process GO:0051225 spindle assembly
biological_process GO:0006364 rRNA processing
biological_process GO:0031122 cytoplasmic microtubule organization
cellular_component GO:0005730 nucleolus
cellular_component GO:0000922 spindle pole
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0000930 gamma-tubulin complex
cellular_component GO:0005874 microtubule
cellular_component GO:0000923 equatorial microtubule organizing center
cellular_component GO:0005737 cytoplasm
cellular_component GO:0031428 box C/D RNP complex
molecular_function GO:0043015 gamma-tubulin binding
molecular_function GO:1990259 histone-glutamine methyltransferase activity
molecular_function GO:0051011 microtubule minus-end binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008649 rRNA methyltransferase activity
molecular_function GO:0008168 methyltransferase activity