IVF0014623 (gene) Melon (IVF77) v1

Overview
NameIVF0014623
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 19546237 .. 19546425 (-)
RNA-Seq ExpressionIVF0014623
SyntenyIVF0014623
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTCAAAAAAAGTCAAATAGTAGCAATCAAGAGTTCAATATGGACGGTAGCTAGTATGATCATAGAGACATGGGCAGAATGTGTAAAGAGGAAAGTTGAACTTTATTATGAGTTGTGTCAAGGAAAATACAAGTTTACATCAAACAGAAAAAATCCTTACTCTTGTGGTTCAGAAAATTGA

mRNA sequence

ATGGAGGAGCTCAAAAAAAGTCAAATAGTAGCAATCAAGAGTTCAATATGGACGGTAGCTAGTATGATCATAGAGACATGGGCAGAATGTGTAAAGAGGAAAGTTGAACTTTATTATGAGTTGTGTCAAGGAAAATACAAGTTTACATCAAACAGAAAAAATCCTTACTCTTGTGGTTCAGAAAATTGA

Coding sequence (CDS)

ATGGAGGAGCTCAAAAAAAGTCAAATAGTAGCAATCAAGAGTTCAATATGGACGGTAGCTAGTATGATCATAGAGACATGGGCAGAATGTGTAAAGAGGAAAGTTGAACTTTATTATGAGTTGTGTCAAGGAAAATACAAGTTTACATCAAACAGAAAAAATCCTTACTCTTGTGGTTCAGAAAATTGA

Protein sequence

MEELKKSQIVAIKSSIWTVASMIIETWAECVKRKVELYYELCQGKYKFTSNRKNPYSCGSEN
Homology
BLAST of IVF0014623 vs. ExPASy TrEMBL
Match: A0A5D3DFG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00720 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-05
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 18 TVASMIIETWAECVKRKVELYYELCQGKYKFTSNRKNPYSCGS 61
          TVASMII TWAEC KRKVE YY+  + KY+  SNR N YS GS
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGS 44

BLAST of IVF0014623 vs. ExPASy TrEMBL
Match: A0A5A7SR74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00040 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-05
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 18 TVASMIIETWAECVKRKVELYYELCQGKYKFTSNRKNPYSCGS 61
          TVASMII TWAEC KRKVE YY+  + KY+  SNR N YS GS
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGS 44

BLAST of IVF0014623 vs. ExPASy TrEMBL
Match: A0A0A0M0F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.5e-05
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0

Query: 21 SMIIETWAECVKRKVELYYELCQGKYKFTSNRKNPYS 58
          SM+I TWAEC +RK+E YYE+C+GKY+  SNR  P S
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVASNRNGPCS 39

BLAST of IVF0014623 vs. ExPASy TrEMBL
Match: A0A5A7TWH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001050 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0

Query: 1  MEELKKSQIVAIKSSIW-------------TVASMIIETWAECVKRKVELYYELCQGKYK 60
          ++++ K  ++   SSIW             TVASMIIETWA C KR+VE YYE  + K++
Sbjct: 21 LDDVDKGLLLTHYSSIWLTRRQWGTTDVCITVASMIIETWARCAKREVEHYYEHRRRKFE 80

BLAST of IVF0014623 vs. ExPASy TrEMBL
Match: A0A5A7T963 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold113G00420 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-04
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0

Query: 26 TWAECVKRKVELYYELCQGKYKFTSNRKNPYSCGS 61
          TW EC KR+VE YYELC+ K++  SN+ NPYS GS
Sbjct: 50 TWVECAKREVEHYYELCRKKHEVASNKNNPYSSGS 84

BLAST of IVF0014623 vs. NCBI nr
Match: TYK22029.1 (uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 7.68e-09
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 18 TVASMIIETWAECVKRKVELYYELCQGKYKFTSNRKNPYSCGS 60
          TVASMII TWAEC KRKVE YY+  + KY+  SNR N YS GS
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGS 44

BLAST of IVF0014623 vs. NCBI nr
Match: KAA0032933.1 (uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 8.17e-09
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 18 TVASMIIETWAECVKRKVELYYELCQGKYKFTSNRKNPYSCGS 60
          TVASMII TWAEC KRKVE YY+  + KY+  SNR N YS GS
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGS 44

BLAST of IVF0014623 vs. NCBI nr
Match: KGN65701.1 (hypothetical protein Csa_019881 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 1.02e-08
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0

Query: 21 SMIIETWAECVKRKVELYYELCQGKYKFTSNRKNPYS 57
          SM+I TWAEC +RK+E YYE+C+GKY+  SNR  P S
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVASNRNGPCS 39

BLAST of IVF0014623 vs. NCBI nr
Match: KAA0045599.1 (hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 9.57e-08
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0

Query: 1  MEELKKSQIVAIKSSIW-------------TVASMIIETWAECVKRKVELYYELCQGKYK 60
          ++++ K  ++   SSIW             TVASMIIETWA C KR+VE YYE  + K++
Sbjct: 21 LDDVDKGLLLTHYSSIWLTRRQWGTTDVCITVASMIIETWARCAKREVEHYYEHRRRKFE 80

BLAST of IVF0014623 vs. NCBI nr
Match: KAA0037849.1 (uncharacterized protein E6C27_scaffold113G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 1.24e-07
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0

Query: 26 TWAECVKRKVELYYELCQGKYKFTSNRKNPYSCGS 60
          TW EC KR+VE YYELC+ K++  SN+ NPYS GS
Sbjct: 50 TWVECAKREVEHYYELCRKKHEVASNKNNPYSSGS 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFG81.1e-0567.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SR741.1e-0567.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0M0F25.5e-0562.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1[more]
A0A5A7TWH61.6e-0443.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T9632.8e-0462.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK22029.17.68e-0967.44uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa][more]
KAA0032933.18.17e-0967.44uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa][more]
KGN65701.11.02e-0862.16hypothetical protein Csa_019881 [Cucumis sativus][more]
KAA0045599.19.57e-0843.84hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa][more]
KAA0037849.11.24e-0762.86uncharacterized protein E6C27_scaffold113G00420 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0014623.1IVF0014623.1mRNA