IVF0014611 (gene) Melon (IVF77) v1

Overview


Name	IVF0014611
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	60S acidic ribosomal protein P2-like
Location	chr08: 7623166 .. 7625474 (+)
RNA-Seq Expression	IVF0014611
Synteny	IVF0014611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAACCCCATCTGCTCAAGATATCAACACCATTCTCTACTCTGGTTCTTTCTTTTTCTTTTTTTCTTTTTTATTTATTTTTTTTAATCTCTTTCTCTGCTTCTTCTTCTTCTTTTTCTTCTTTTTTATTTATTTTTTTTAATCTCTTTCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTTTTGTGATTTTCTCCATCCATCCAATAACTTTCAAGAATCTGGTTTTAAAGCCAAGAAAATGGAACTTATATGGGTTTCTAGATATGCTTCCAACTTCATATTCCACCTATACTTATATATATATAAATGAACTATATATGAACATTTTCACAGCTAACCCTTCTAGGCTTCCATAAGTTGTTTTTCTGATATTAGTGGGGTTTTTTTTTTTTTTTTTTTTTGCTGGTTAGTTTAAAAACTTGTGGAAGTGTTGATTCAAATTTTTTATGTTTTGGTTGAAGATATAATAGTTTTGTTATGGTGATTAATCTAGACTTTAACAGCTCCAACGTGCTAGGGTTTCACAAGAAGCTGATTATTTTCTGGGGCTGTAGCTCCTTATATTCCCTCTCGGTCTCGCTCTTACTTTTTTCTCCCCAACGACTTCAGTTCGAGAAAGAAATGTGGAGAGCAAGAGAGGTAAATGGAGAGAAATGCTTAAACACCAAAGAGGGGGAAATATAGAGAGCCAAAGCTATAGGACTAAAAGGAAGAATACCAAATATGAATAAAGGTTTTTGCTCTTTTCTTTTTCCTTTTTTTGAGAAATTTAGTAATATTTTATTTGGACATAATTTTTTTTTTAGGTCTTTCATACAAAAAAAAAAAAAAGAAAGAAAGAAAGATAATAGTAAATCTATGAGGGTTGCTGTTCAAACTAAAATGCTTGGATTTTTATTAGTTGATTTCTTTTTCCTGAAATGACCCTAAATGAAAACAGTAGAGAATATAATTTTTTTTCTAGTTAAATGTGCCATGCTTTTGCTTTCTATTTTGAAAGACCTTGACGGATGATTATCATTAACCTAAATTCCTTTTTATTGTATAAATTGTTTTGGGGTTCTTGTTTCTATAAAATCATCTGTTTTCCTTTATATAATTCTCATGAAGTCTACTTTCTTTAACCAAAAAAAAAAAAAAAACTTGTGTTCGGTTGTTTTTTTTCTTAATTAATATTTTGATATAAAACACACTACACAATAAATTTTCTTTGTTGCTTAAGTTTTTTAGAACTGATTTAAGAATACCAAAGTTTTAAATGAAGAAAAATAACTAACTTGAACAGACATTCTGAAATTTCATTATTTCTTTACATTTTGTCACATGCAGTTTTAAGTTTTAGGTCCCTTGAAAAAATGATTTATCACTATCTGTTTCTTCGGCTTTTTTGTGACAAGACACAAATCGACTAAAACACAGACACCATTTGGTTGACCTGACAGGATCTAAACCAACTGACTAGAATTAAAGAACTCATTTGGTTCTGTCCATTTTGGTTTCCTTTTATTACCCTTAGCTCAAAATCGTTGTTTGTTGGACAGGACAACTCATGACTTGTGAGAGACTTGCCTCCAACTATTTCTATACATATAAAAATTTTATGCATCACAACCACAGACCAACTAACGATAGAAAAAGTTTACTATATCTGTGAAAATGTTTGTATCAGATAGGTCCTTAAACCAAACTTTTAATTTTGTACCATCAATTTCTAGGTACCTTCATCATTAAACTTTCAACTTCATGTCAAATGATTTTGTAAATTGAAAAATATAGAATAGGTGGAGTATATTGGACACAAAGTTGGAAGTTGCACACGGTAAAATTTAGGGATGTATTTGTGGTAAGAATTTAAACTGGTAATTTTTAGCTAAATTTAATTGATGATGCCTTTTGATAGTCAATGGTTAACATTTGCACAGTTGGAGCTGAAGCTGATGTTGAAAAGATTGAGCTGCTTCTTGCTGAAGTTAAGGGCAAGGATATAACTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCCTTACCTACCGGTGCCGTCGTTGCAGCTGTTGTGGCTGCAGTCCCCTCTACTGTCGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGATGATGCTATGGACTCTGATGAAGTAAATTACTTTTCCCTTCAACAACTTTGGATTGGTTGTTAGAATATTGACTTTGTTTTCTTATGTGTGTTACAGGACATTTGCTTCTCCCTGTTTGAAGACGAGTAA

mRNA sequence

ATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAACCCCATCTGCTCAAGATATCAACACCATTCTCTACTCTGTCAATGGTTAACATTTGCACAGTTGGAGCTGAAGCTGATGTTGAAAAGATTGAGCTGCTTCTTGCTGAAGTTAAGGGCAAGGATATAACTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCCTTACCTACCGGTGCCGTCGTTGCAGCTGTTGTGGCTGCAGTCCCCTCTACTGTCGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGATGATGCTATGGACTCTGATGAAGACATTTGCTTCTCCCTGTTTGAAGACGAGTAA

Coding sequence (CDS)

ATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAACCCCATCTGCTCAAGATATCAACACCATTCTCTACTCTGTCAATGGTTAACATTTGCACAGTTGGAGCTGAAGCTGATGTTGAAAAGATTGAGCTGCTTCTTGCTGAAGTTAAGGGCAAGGATATAACTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCCTTACCTACCGGTGCCGTCGTTGCAGCTGTTGTGGCTGCAGTCCCCTCTACTGTCGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGATGATGCTATGGACTCTGATGAAGACATTTGCTTCTCCCTGTTTGAAGACGAGTAA

Protein sequence

MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE

Homology

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BLAST of IVF0014611 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.6e-19
Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKV+AA+LLA+LGGN       ++P        + +VGA+AD +KIELLL++VKGKDITE
Sbjct: 1   MKVIAAFLLALLGGN-------TSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE 120
           LIA GRE++AS+P+G  VA   AA     DA A  A E KKEEK +  +SDE++ FSLF+
Sbjct: 61  LIASGRERLASVPSGGGVAVAAAAGGGGGDAPAAAAEEPKKEEKSEE-ESDEELGFSLFD 113

Query: 121 D 122
           D
Sbjct: 121 D 113

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BLAST of IVF0014611 vs. ExPASy Swiss-Prot
Match: Q9LXM8 (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-17
Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKV AA+LLAVLGGN       + P +      I  VGA+ D E IELLL EV GKDI E
Sbjct: 1   MKVAAAFLLAVLGGN-------ANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE 120
           LIA GREK+AS+P+G  VA  V+A PS+    A   AE K+ +K++  +SD+D+ FSLFE
Sbjct: 61  LIASGREKLASVPSGGGVA--VSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111

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BLAST of IVF0014611 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-17
Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MK VAAYLLAVL GN       ++P +      + +VG E D EK+ELLL+++ GKDITE
Sbjct: 1   MKFVAAYLLAVLAGN-------ASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEK-DDAMDSDEDICFSLF 120
           LIA GREK AS+P G    AV AA P+    AAP AAEAKKEEK ++  +SD+D+ FSLF
Sbjct: 61  LIAAGREKFASVPCGGGGVAVAAAAPA-AGGAAP-AAEAKKEEKVEEKEESDDDMGFSLF 112

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BLAST of IVF0014611 vs. ExPASy Swiss-Prot
Match: O24415 (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-16
Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKV+AAYLLAVLGGN       ++P +      + +VGAEAD EK+E LL E+K KDITE
Sbjct: 1   MKVIAAYLLAVLGGN-------TSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEK-DDAMDSDEDICFSLF 120
           +IA GRE+++S+P+G     + A        AAP A EAKKEEK ++  +SDED+ FSLF
Sbjct: 61  VIAAGRERLSSVPSGGGAIDMGAPAAVAGGGAAP-AEEAKKEEKVEEKEESDEDMGFSLF 113

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BLAST of IVF0014611 vs. ExPASy Swiss-Prot
Match: Q9SLF7 (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-15
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVL G        ++P S      + +VGAE +  +IELLL EVKGKD+ E
Sbjct: 1   MKVVAAYLLAVLSGK-------ASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPV-AAEAKKEE-KDDAMDSDEDICFSL 120
           LIA GREK+AS+P+G      VA+  S         AAE+KKEE K++  +SD+D+ FSL
Sbjct: 61  LIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSL 115

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BLAST of IVF0014611 vs. ExPASy TrEMBL
Match: A0A1S4E3U5 (60S acidic ribosomal protein P2-like OS=Cucumis melo OX=3656 GN=LOC103500881 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.7e-40
Identity = 104/122 (85.25%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVLGGNK       TP +      + +VGAEADVEKIELLLAEVKGKDITE
Sbjct: 1   MKVVAAYLLAVLGGNK-------TPSAQDINTILYSVGAEADVEKIELLLAEVKGKDITE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE 120
           LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE
Sbjct: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE 115

Query: 121 DE 123
           DE
Sbjct: 121 DE 115

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BLAST of IVF0014611 vs. ExPASy TrEMBL
Match: A0A5A7SLD3 (60S acidic ribosomal protein P2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001160 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 31  MVNICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVD 90
           MVNICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVD
Sbjct: 1   MVNICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVD 60

Query: 91  AAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE 123
           AAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE
Sbjct: 61  AAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE 92

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BLAST of IVF0014611 vs. ExPASy TrEMBL
Match: A0A0A0KEV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G451480 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35
Identity = 100/136 (73.53%), Postives = 106/136 (77.94%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNK----------PHLLKISTPFSTLSMVNICT----VGAEADVEKI 60
           MKVVAAYLLAVLGGNK           +LL +     T S  +I T    VGAEA+VEKI
Sbjct: 1   MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKI 60

Query: 61  ELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDD 120
           ELL+AE+KGKDITELIA  REKMASLPTGAVVAA VAAVPSTVD AAPV AEAKKEEKDD
Sbjct: 61  ELLIAELKGKDITELIAYAREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDD 120

Query: 121 AMDSDEDICFSLFEDE 123
           AMDSDEDICFSLFEDE
Sbjct: 121 AMDSDEDICFSLFEDE 136

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BLAST of IVF0014611 vs. ExPASy TrEMBL
Match: A0A6J1CPQ6 (60S acidic ribosomal protein P2-2-like OS=Momordica charantia OX=3673 GN=LOC111013605 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.4e-21
Identity = 72/127 (56.69%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVLGGN       ++P +      + +VGAEA+ EKIELLL++VKGKDI E
Sbjct: 1   MKVVAAYLLAVLGGN-------TSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAV-----PSTVDAAAPVAAEAKKEE-KDDAMDSDEDI 120
           ++ACGREKMASLP   VVAA V  +      ++   AA  AAEAKKEE K+D  DSD+DI
Sbjct: 61  VVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKEEKKEDVEDSDDDI 120

Query: 121 CFSLFED 122
           CF+LF++
Sbjct: 121 CFTLFDE 120

[Close]

BLAST of IVF0014611 vs. ExPASy TrEMBL
Match: A0A5D2MD03 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G254200v1 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 71/121 (58.68%), Postives = 89/121 (73.55%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVLGGN       ++P +      + +VGAEA+ E+I+LLL+EVKGKDITE
Sbjct: 1   MKVVAAYLLAVLGGN-------TSPSADDLKAILGSVGAEAEDERIQLLLSEVKGKDITE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEK-DDAMDSDEDICFSLF 120
           LIA GREK+AS+P+G    AV AA P    AAAP AAEAKKEEK ++  +SD+D+ FSLF
Sbjct: 61  LIASGREKLASVPSGGGGVAVAAAAPGAGAAAAPAAAEAKKEEKVEEKEESDDDMGFSLF 114

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BLAST of IVF0014611 vs. NCBI nr
Match: XP_016902906.1 (PREDICTED: 60S acidic ribosomal protein P2-like [Cucumis melo])

HSP 1 Score: 174 bits (440), Expect = 1.33e-53
Identity = 104/122 (85.25%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVLGGNK       TP +      + +VGAEADVEKIELLLAEVKGKDITE
Sbjct: 1   MKVVAAYLLAVLGGNK-------TPSAQDINTILYSVGAEADVEKIELLLAEVKGKDITE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE 120
           LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE
Sbjct: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE 115

Query: 121 DE 122
           DE
Sbjct: 121 DE 115

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BLAST of IVF0014611 vs. NCBI nr
Match: KAA0025275.1 (60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa] >TYK07392.1 60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (420), Expect = 7.25e-51
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 31  MVNICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVD 90
           MVNICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVD
Sbjct: 1   MVNICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVD 60

Query: 91  AAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE 122
           AAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE
Sbjct: 61  AAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE 92

[Close]

BLAST of IVF0014611 vs. NCBI nr
Match: XP_004143377.1 (60S acidic ribosomal protein P2 [Cucumis sativus] >XP_031743701.1 60S acidic ribosomal protein P2 [Cucumis sativus] >KGN48245.1 hypothetical protein Csa_002919 [Cucumis sativus])

HSP 1 Score: 157 bits (396), Expect = 1.29e-46
Identity = 100/136 (73.53%), Postives = 106/136 (77.94%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNK----------PHLLKISTPFSTLSMVNICT----VGAEADVEKI 60
           MKVVAAYLLAVLGGNK           +LL +     T S  +I T    VGAEA+VEKI
Sbjct: 1   MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKI 60

Query: 61  ELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDD 120
           ELL+AE+KGKDITELIA  REKMASLPTGAVVAA VAAVPSTVD AAPV AEAKKEEKDD
Sbjct: 61  ELLIAELKGKDITELIAYAREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDD 120

Query: 121 AMDSDEDICFSLFEDE 122
           AMDSDEDICFSLFEDE
Sbjct: 121 AMDSDEDICFSLFEDE 136

[Close]

BLAST of IVF0014611 vs. NCBI nr
Match: KAF7804322.1 (60S acidic ribosomal protein P2-like [Senna tora])

HSP 1 Score: 110 bits (275), Expect = 1.64e-28
Identity = 73/121 (60.33%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKV+AAYLLAVLGGN       ++P ST     + +VGAEAD +KIELLL+EVKGKDITE
Sbjct: 1   MKVIAAYLLAVLGGN-------TSPSSTDIEKILGSVGAEADSDKIELLLSEVKGKDITE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEK-DDAMDSDEDICFSLF 120
           LIA GREK+AS+P G   A  VAA P    AAAP AAE KKEEK ++  +SD+D+ FSLF
Sbjct: 61  LIAAGREKLASVPCGGGGAVAVAAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLF 114

[Close]

BLAST of IVF0014611 vs. NCBI nr
Match: XP_022143770.1 (60S acidic ribosomal protein P2-2-like [Momordica charantia])

HSP 1 Score: 109 bits (272), Expect = 5.58e-28
Identity = 72/126 (57.14%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVLGGN       ++P +      + +VGAEA+ EKIELLL++VKGKDI E
Sbjct: 1   MKVVAAYLLAVLGGN-------TSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPS-----TVDAAAPVAAEAKKEEK-DDAMDSDEDI 120
           ++ACGREKMASLP   VVAA V  + +     +   AA  AAEAKKEEK +D  DSD+DI
Sbjct: 61  VVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKEEKKEDVEDSDDDI 119

[Close]

BLAST of IVF0014611 vs. TAIR 10
Match: AT3G44590.2 (60S acidic ribosomal protein family )

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKV AA+LLAVLGGN       + P +      I  VGA+ D E IELLL EV GKDI E
Sbjct: 1   MKVAAAFLLAVLGGN-------ANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE 120
           LIA GREK+AS+P+G  VA  V+A PS+    A   AE K+ +K++  +SD+D+ FSLFE
Sbjct: 61  LIASGREKLASVPSGGGVA--VSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of IVF0014611 vs. TAIR 10
Match: AT3G44590.1 (60S acidic ribosomal protein family )

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKV AA+LLAVLGGN       + P +      I  VGA+ D E IELLL EV GKDI E
Sbjct: 1   MKVAAAFLLAVLGGN-------ANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFE 120
           LIA GREK+AS+P+G  VA  V+A PS+    A   AE K+ +K++  +SD+D+ FSLFE
Sbjct: 61  LIASGREKLASVPSGGGVA--VSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of IVF0014611 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family )

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-16
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVL G        ++P S      + +VGAE +  +IELLL EVKGKD+ E
Sbjct: 1   MKVVAAYLLAVLSGK-------ASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPV-AAEAKKEE-KDDAMDSDEDICFSL 120
           LIA GREK+AS+P+G      VA+  S         AAE+KKEE K++  +SD+D+ FSL
Sbjct: 61  LIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSL 115

[Close]

BLAST of IVF0014611 vs. TAIR 10
Match: AT2G27710.2 (60S acidic ribosomal protein family )

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-16
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVL G        ++P S      + +VGAE +  +IELLL EVKGKD+ E
Sbjct: 1   MKVVAAYLLAVLSGK-------ASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPV-AAEAKKEE-KDDAMDSDEDICFSL 120
           LIA GREK+AS+P+G      VA+  S         AAE+KKEE K++  +SD+D+ FSL
Sbjct: 61  LIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSL 115

[Close]

BLAST of IVF0014611 vs. TAIR 10
Match: AT2G27710.3 (60S acidic ribosomal protein family )

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-16
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKPHLLKISTPFSTLSMVNICTVGAEADVEKIELLLAEVKGKDITE 60
           MKVVAAYLLAVL G        ++P S      + +VGAE +  +IELLL EVKGKD+ E
Sbjct: 1   MKVVAAYLLAVLSGK-------ASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAE 60

Query: 61  LIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPV-AAEAKKEE-KDDAMDSDEDICFSL 120
           LIA GREK+AS+P+G      VA+  S         AAE+KKEE K++  +SD+D+ FSL
Sbjct: 61  LIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSL 115

The following BLAST results are available for this feature:

BLAST of IVF0014611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41099	2.6e-19	52.89	60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1	[more]
Q9LXM8	2.4e-17	51.67	60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 ...	[more]
P46252	2.4e-17	53.72	60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3	[more]
O24415	3.5e-16	50.41	60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1	[more]
Q9SLF7	3.8e-15	50.00	60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 ...	[more]

BLAST of IVF0014611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3U5	2.7e-40	85.25	60S acidic ribosomal protein P2-like OS=Cucumis melo OX=3656 GN=LOC103500881 PE=...	[more]
A0A5A7SLD3	1.3e-37	100.00	60S acidic ribosomal protein P2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KEV8	2.0e-35	73.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G451480 PE=3 SV=1	[more]
A0A6J1CPQ6	6.4e-21	56.69	60S acidic ribosomal protein P2-2-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D2MD03	1.9e-20	58.68	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G254200v1 P...	[more]

BLAST of IVF0014611 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902906.1	1.33e-53	85.25	PREDICTED: 60S acidic ribosomal protein P2-like [Cucumis melo]	[more]
KAA0025275.1	7.25e-51	100.00	60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa] >TYK07392.1 60S ...	[more]
XP_004143377.1	1.29e-46	73.53	60S acidic ribosomal protein P2 [Cucumis sativus] >XP_031743701.1 60S acidic rib...	[more]
KAF7804322.1	1.64e-28	60.33	60S acidic ribosomal protein P2-like [Senna tora]	[more]
XP_022143770.1	5.58e-28	57.14	60S acidic ribosomal protein P2-2-like [Momordica charantia]	[more]

BLAST of IVF0014611 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44590.2	1.7e-18	51.67	60S acidic ribosomal protein family	[more]
AT3G44590.1	1.7e-18	51.67	60S acidic ribosomal protein family	[more]
AT2G27710.1	2.7e-16	50.00	60S acidic ribosomal protein family	[more]
AT2G27710.2	2.7e-16	50.00	60S acidic ribosomal protein family	[more]
AT2G27710.3	2.7e-16	50.00	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 36..119 e-value: 1.0E-12 score: 48.5
None	No IPR available	PANTHER	PTHR21141:SF96	60S ACIDIC RIBOSOMAL PROTEIN P2B	coord: 1..119
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..65 e-value: 2.5E-12 score: 48.7
IPR044076	Ribosomal protein P2	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 1..119
IPR044076	Ribosomal protein P2	CDD	cd05833	Ribosomal_P2	coord: 1..120 e-value: 2.03687E-21 score: 80.0
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 2..120 score: 11.330093

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014611.1	IVF0014611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002182	cytoplasmic translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome