IVF0014596 (gene) Melon (IVF77) v1

Overview
NameIVF0014596
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 12674879 .. 12675328 (+)
RNA-Seq ExpressionIVF0014596
SyntenyIVF0014596
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGTTTTTATGTGCTTGAGCCACCAATAGCTAGAGAGGAAGAAGTGGATGGAATTACTTCATTGAGTGAAGCAACGAGTACGGAATCTACCGAACACACATCAAATAGGTATAGTAAGAAAAGAGCAAGAAGTGTGGATCCATCGGTAGCGGCAACGAATATTTTTGAGAATGTTATGAGCAGACACCTTTCAAGTGCTAATGATAATATTCAAGAAATTATTGCATTTTATAAACAGGTAGCTGAACGAGAGTCCACAAGAGAAGAACGTCGAAACTCATTAGCCAGTAAAATTAGAAGGATAAATAGATTAGTTCAAAAAAGGGTGAGAGCGGCTAAGATTATCACTAAAGATCAATCTCAGATTGACTATTTTTTTAATCTTCTACATGGTGAAAGATATGAATTCATAATGGAGGTTCCATATGAAGACGTTCATCCTTAA

mRNA sequence

ATGGATGGTTTTTATGTGCTTGAGCCACCAATAGCTAGAGAGGAAGAAGTGGATGGAATTACTTCATTGAGTGAAGCAACGAGTACGGAATCTACCGAACACACATCAAATAGGTATAGTAAGAAAAGAGCAAGAAGTGTGGATCCATCGGTAGCGGCAACGAATATTTTTGAGAATGTTATGAGCAGACACCTTTCAAGTGCTAATGATAATATTCAAGAAATTATTGCATTTTATAAACAGGTAGCTGAACGAGAGTCCACAAGAGAAGAACGTCGAAACTCATTAGCCAGTAAAATTAGAAGGATAAATAGATTAGTTCAAAAAAGGGTGAGAGCGGCTAAGATTATCACTAAAGATCAATCTCAGATTGACTATTTTTTTAATCTTCTACATGGTGAAAGATATGAATTCATAATGGAGGTTCCATATGAAGACGTTCATCCTTAA

Coding sequence (CDS)

ATGGATGGTTTTTATGTGCTTGAGCCACCAATAGCTAGAGAGGAAGAAGTGGATGGAATTACTTCATTGAGTGAAGCAACGAGTACGGAATCTACCGAACACACATCAAATAGGTATAGTAAGAAAAGAGCAAGAAGTGTGGATCCATCGGTAGCGGCAACGAATATTTTTGAGAATGTTATGAGCAGACACCTTTCAAGTGCTAATGATAATATTCAAGAAATTATTGCATTTTATAAACAGGTAGCTGAACGAGAGTCCACAAGAGAAGAACGTCGAAACTCATTAGCCAGTAAAATTAGAAGGATAAATAGATTAGTTCAAAAAAGGGTGAGAGCGGCTAAGATTATCACTAAAGATCAATCTCAGATTGACTATTTTTTTAATCTTCTACATGGTGAAAGATATGAATTCATAATGGAGGTTCCATATGAAGACGTTCATCCTTAA

Protein sequence

MDGFYVLEPPIAREEEVDGITSLSEATSTESTEHTSNRYSKKRARSVDPSVAATNIFENVMSRHLSSANDNIQEIIAFYKQVAERESTREERRNSLASKIRRINRLVQKRVRAAKIITKDQSQIDYFFNLLHGERYEFIMEVPYEDVHP
Homology
BLAST of IVF0014596 vs. ExPASy TrEMBL
Match: A0A5A7TE82 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002380 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 68/93 (73.12%), Postives = 74/93 (79.57%), Query Frame = 0

Query: 1   MDGFYVLEPPIAREEEVDGITSLSE-ATSTESTEHTSNRYSKKRARSVDPSVAATNIFEN 60
           MDGFYV +PPI  EEEVDG  S+SE  T+T+S  HTSNR SKKRARSVDP VAA N  EN
Sbjct: 10  MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLEN 69

Query: 61  VMSRHLSSANDNIQEIIAFYKQVAERESTREER 93
           VMS+HLSSANDNIQE  AFY+ V  RESTREER
Sbjct: 70  VMSKHLSSANDNIQETTAFYRYVDARESTREER 102

BLAST of IVF0014596 vs. ExPASy TrEMBL
Match: A0A0A0L2J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099560 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.4e-07
Identity = 36/55 (65.45%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 1  MDGFYVLEPPIAREEEVDGITSLSEATSTEST--EHTSNRYSKKRARSVDPSVAA 54
          MD FYVLEPPI   EEVDG  S+SEAT+   +   HTSNR+SKKRARSVD  VA+
Sbjct: 1  MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVAS 55

BLAST of IVF0014596 vs. NCBI nr
Match: KAA0041258.1 (hypothetical protein E6C27_scaffold128G002380 [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (300), Expect = 4.95e-32
Identity = 68/93 (73.12%), Postives = 74/93 (79.57%), Query Frame = 0

Query: 1   MDGFYVLEPPIAREEEVDGITSLSEATS-TESTEHTSNRYSKKRARSVDPSVAATNIFEN 60
           MDGFYV +PPI  EEEVDG  S+SE T+ T+S  HTSNR SKKRARSVDP VAA N  EN
Sbjct: 10  MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLEN 69

Query: 61  VMSRHLSSANDNIQEIIAFYKQVAERESTREER 92
           VMS+HLSSANDNIQE  AFY+ V  RESTREER
Sbjct: 70  VMSKHLSSANDNIQETTAFYRYVDARESTREER 102

BLAST of IVF0014596 vs. NCBI nr
Match: XP_038882353.1 (mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida])

HSP 1 Score: 77.0 bits (188), Expect = 1.53e-13
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 47  VDPSVAATNIFENVMSRHLSSANDNIQEIIAFYKQVAERESTREERRNSLASKIRRI 103
           +DP V   N  ENVMS HLS+ANDNIQEI  FY+QVAERESTRE RRNSL S+IR+I
Sbjct: 1   MDPLVTTVNGLENVMSSHLSNANDNIQEIAMFYRQVAERESTREARRNSLVSEIRKI 57

BLAST of IVF0014596 vs. NCBI nr
Match: KGN56195.1 (hypothetical protein Csa_009969 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 9.50e-10
Identity = 36/55 (65.45%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 1  MDGFYVLEPPIAREEEVDGITSLSEATSTEST--EHTSNRYSKKRARSVDPSVAA 53
          MD FYVLEPPI   EEVDG  S+SEAT+   +   HTSNR+SKKRARSVD  VA+
Sbjct: 1  MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVAS 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TE821.5e-2473.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0L2J46.4e-0765.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099560 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0041258.14.95e-3273.12hypothetical protein E6C27_scaffold128G002380 [Cucumis melo var. makuwa][more]
XP_038882353.11.53e-1371.93mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida][more]
KGN56195.19.50e-1065.45hypothetical protein Csa_009969 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..46

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0014596.1IVF0014596.1mRNA