IVF0014499 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGCTTTTTGTATTGTTTTTGCTGGTGGCTATTGCGGCGGCGCGCGGCGTTCCTGGTGGAGATCAAGCGGAGTTCGTGGAGGCCGTTGAAGTGAAGGCGGCGGAGCTGCCGAGGAATGCTGGCCGTGGTGATAATGTTCGTGATGAGAAGAATTTTATCTACGGCGGAGTTGGCGGCTTCGCTGGCATGGGCGGGTAACCACACCCTAAAATAATCAGTACTTACATGCAATTCCATGCATCCATTTTCTAAAAGGAATTTTTTTTTCATAAAGATTAATTGAATTCTTAAGGGTGCACCAAAAGCTACACAATGGATGTAGTCTAAACCAAGTTTTTTTCCCTTTAAATTTACTCCAATAGTTTAATTTTTGCTTGTACATGTTTTTTTTTTTTTTTTTTTGTGGTTTTGACTTGAATTCAATTGTACTTATTGAAATATTTTGCATGATACTATAACTCTTTCAAAGTAATGTAAATATTCTTATACAAATAACAAAGTTGAGCTGCATTTTACAATTATATCAGCTTACAACAAACTATATATTTACTACATACGCTTTTCACTTTCGTAAACACATGCACTTGGATTTTGAGCTAAAAACAATCTTTCGAAAAAAAAGCTTTTTTCTTTTTAGTTTTATATTATAAATGGGGATTTGTATTTATTATAAGTTTAATCATTGTTATTTGGTTTAACAGATACGCAGGGTTGGGAGGCTTTCCCATGCTAGGGGGTTCTGCCGGGATAGGAAAATTTGGTGGAATTGGTGGGGTCGCCGGAATTGGTAGCTTGGGAGACCCCGGCGGTCTGGGAGGTGGTGCCGGCGCCGGAGGAGCTAGCGGGATTGGCGGTTTAGCCGGGCATGGACTTGGCGGAGCAGGCGGAATAGGTGGTCTAGCTGGGCACGGACTTGGTGGGGCTGGGGGTATCGGAACCGGCAGTGGCATCGGGGGCATTGGAGGATCCAACGGTGGTATCGGAGGAGATGGGGGAGCTGGCGGTGGTCCGCCAGTCAGTGGCTCTATTCGCCCATAA ATGGAGAAGCTTTTTGTATTGTTTTTGCTGGTGGCTATTGCGGCGGCGCGCGGCGTTCCTGGTGGAGATCAAGCGGAGTTCGTGGAGGCCGTTGAAGTGAAGGCGGCGGAGCTGCCGAGGAATGCTGGCCGTGGTGATAATGTTCGTGATGAGAAGAATTTTATCTACGGCGGAGTTGGGTTGGGAGGCTTTCCCATGCTAGGGGGTTCTGCCGGGATAGGAAAATTTGGTGGAATTGGTGGGGTCGCCGGAATTGGTAGCTTGGGAGACCCCGGCGGTCTGGGAGGTGGTGCCGGCGCCGGAGGAGCTAGCGGGATTGGCGGTTTAGCCGGGCATGGACTTGGCGGAGCAGGCGGAATAGGTGGTCTAGCTGGGCACGGACTTGGTGGGGCTGGGGGTATCGGAACCGGCAGTGGCATCGGGGGCATTGGAGGATCCAACGGTGGTATCGGAGGAGATGGGGGAGCTGGCGGTGGTCCGCCAGTCAGTGGCTCTATTCGCCCATAA ATGGAGAAGCTTTTTGTATTGTTTTTGCTGGTGGCTATTGCGGCGGCGCGCGGCGTTCCTGGTGGAGATCAAGCGGAGTTCGTGGAGGCCGTTGAAGTGAAGGCGGCGGAGCTGCCGAGGAATGCTGGCCGTGGTGATAATGTTCGTGATGAGAAGAATTTTATCTACGGCGGAGTTGGGTTGGGAGGCTTTCCCATGCTAGGGGGTTCTGCCGGGATAGGAAAATTTGGTGGAATTGGTGGGGTCGCCGGAATTGGTAGCTTGGGAGACCCCGGCGGTCTGGGAGGTGGTGCCGGCGCCGGAGGAGCTAGCGGGATTGGCGGTTTAGCCGGGCATGGACTTGGCGGAGCAGGCGGAATAGGTGGTCTAGCTGGGCACGGACTTGGTGGGGCTGGGGGTATCGGAACCGGCAGTGGCATCGGGGGCATTGGAGGATCCAACGGTGGTATCGGAGGAGATGGGGGAGCTGGCGGTGGTCCGCCAGTCAGTGGCTCTATTCGCCCATAA MEKLFVLFLLVAIAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDNVRDEKNFIYGGVGLGGFPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGAGAGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGIGTGSGIGGIGGSNGGIGGDGGAGGGPPVSGSIRP Homology
BLAST of IVF0014499 vs. ExPASy Swiss-Prot
Match: O48848 (Glycine-rich protein 23 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.9e-06 Identity = 62/110 (56.36%), Postives = 72/110 (65.45%), Query Frame = 0
BLAST of IVF0014499 vs. ExPASy Swiss-Prot
Match: Q9LTP5 (Glycine-rich protein 5 OS=Arabidopsis thaliana OX=3702 GN=GRP5 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 9.4e-04 Identity = 63/119 (52.94%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of IVF0014499 vs. ExPASy TrEMBL
Match: A0A5D3CZJ9 (Putative PE-PGRS family protein PE_PGRS46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002410 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 7.3e-68 Identity = 168/178 (94.38%), Postives = 168/178 (94.38%), Query Frame = 0
BLAST of IVF0014499 vs. ExPASy TrEMBL
Match: A0A1S3AYL0 (uncharacterized PE-PGRS family protein PE_PGRS46 OS=Cucumis melo OX=3656 GN=LOC103484176 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67 Identity = 167/178 (93.82%), Postives = 167/178 (93.82%), Query Frame = 0
BLAST of IVF0014499 vs. ExPASy TrEMBL
Match: A0A0A0L460 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133210 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65 Identity = 161/171 (94.15%), Postives = 164/171 (95.91%), Query Frame = 0
BLAST of IVF0014499 vs. ExPASy TrEMBL
Match: A0A6J1IHK9 (glycine-rich cell wall structural protein OS=Cucurbita maxima OX=3661 GN=LOC111473638 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 9.0e-34 Identity = 128/211 (60.66%), Postives = 141/211 (66.82%), Query Frame = 0
BLAST of IVF0014499 vs. ExPASy TrEMBL
Match: A0A6J1G005 (glycine-rich cell wall structural protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449466 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 3.5e-30 Identity = 122/200 (61.00%), Postives = 135/200 (67.50%), Query Frame = 0
BLAST of IVF0014499 vs. NCBI nr
Match: KAA0049179.1 (putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa] >TYK17381.1 putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa]) HSP 1 Score: 266 bits (681), Expect = 1.28e-88 Identity = 168/178 (94.38%), Postives = 168/178 (94.38%), Query Frame = 0
BLAST of IVF0014499 vs. NCBI nr
Match: XP_008439361.1 (PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46 [Cucumis melo]) HSP 1 Score: 265 bits (677), Expect = 5.20e-88 Identity = 167/178 (93.82%), Postives = 167/178 (93.82%), Query Frame = 0
BLAST of IVF0014499 vs. NCBI nr
Match: XP_011652752.1 (glycine-rich protein 23 [Cucumis sativus]) HSP 1 Score: 251 bits (641), Expect = 1.75e-82 Identity = 161/181 (88.95%), Postives = 164/181 (90.61%), Query Frame = 0
BLAST of IVF0014499 vs. NCBI nr
Match: KAE8650313.1 (hypothetical protein Csa_010764 [Cucumis sativus]) HSP 1 Score: 239 bits (611), Expect = 5.29e-78 Identity = 155/175 (88.57%), Postives = 158/175 (90.29%), Query Frame = 0
BLAST of IVF0014499 vs. NCBI nr
Match: XP_022974868.1 (glycine-rich cell wall structural protein [Cucurbita maxima]) HSP 1 Score: 153 bits (387), Expect = 1.44e-43 Identity = 128/211 (60.66%), Postives = 141/211 (66.82%), Query Frame = 0
BLAST of IVF0014499 vs. TAIR 10
Match: AT1G04660.1 (glycine-rich protein ) HSP 1 Score: 58.5 bits (140), Expect = 5.8e-09 Identity = 68/122 (55.74%), Postives = 80/122 (65.57%), Query Frame = 0
BLAST of IVF0014499 vs. TAIR 10
Match: AT2G32690.3 (glycine-rich protein 23 ) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07 Identity = 64/111 (57.66%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of IVF0014499 vs. TAIR 10
Match: AT2G32690.1 (glycine-rich protein 23 ) HSP 1 Score: 52.4 bits (124), Expect = 4.2e-07 Identity = 62/110 (56.36%), Postives = 72/110 (65.45%), Query Frame = 0
BLAST of IVF0014499 vs. TAIR 10
Match: AT3G20470.1 (glycine-rich protein 5 ) HSP 1 Score: 45.1 bits (105), Expect = 6.7e-05 Identity = 63/119 (52.94%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of IVF0014499 vs. TAIR 10
Match: AT2G32690.2 (glycine-rich protein 23 ) HSP 1 Score: 43.9 bits (102), Expect = 1.5e-04 Identity = 62/111 (55.86%), Postives = 68/111 (61.26%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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