IVF0014312 (gene) Melon (IVF77) v1

Overview


Name	IVF0014312
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	heterogeneous nuclear ribonucleoprotein Q-like
Location	tig00195367: 423604 .. 428619 (-)
RNA-Seq Expression	IVF0014312
Synteny	IVF0014312

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATAGCTATTTTTGGTATAAAAAGGGCTTTTCAGACATTTCGCCGCACAAACCCGGCAACGGAGAAGAGAGAAAATATTCGCGAGGGAAGAAGACGACGACGTTTAAGTAGATAGAAGATTCGGCTTCCAATTTAGCCCATCCGCCTTCAAGCCCTCGTCGTTTCAGCCCAGAGAGGCTTCGTCTTCTGCACACAAAGGCCCGAATCGAAATAACTCATTCTAAGATATCTTAACGCACCTCTGATTCTCCCCTTCTCTCTGAGGTTCCCAAGCGAACCAAAGGAAATCAACCCAGATACAGAAAACAAAAGGATTCGCTCACAACCAATATTCCAATTCTTGTACCTTCCGAATCCTTCACTTCACTGGTATGGCTTTCAAGGCTCCTACTGTGACTTCTTTCGCCTTTCTCCCTATTTCATTACCTGGGTTCTTCACTTTTCAGTCCCTTAAGGTGTCTAGATGTGATATTGATCGAATTGTTTATAGTGGTGTGTTTTCCTTATGGTTTTTGGTTTCTTTAGCTGCCACCCAATGCGCATGTTGGCGAGATTTATCCTGCTTATTTGTGTTTAGGTCTCATACCACTCCCATTTAGGTTTGTTTTCTTCAATAGGATGTTAGATTTTTGCAATCCCCATTCGTTTCTCGCTTTGTCTGTTGCTATTTGATTCTGGGTCTCGTTTATTGGAAAACTGAGGTGTTTCATTTTCGTTGTATTCTGTCTGTCGCATATTGGGGGCTGTGTTTTGTTTATTATGTACCTTGGGATCGGATGTCTTTGAAACGAACCACACTAGTTGATGAAACACGAGTCAGGCTTATGTGCCGATGGATTTTATTTTGTAATTCTGTGGGCAGACATCGTATTTTATCTCCTCTGCTCCTTCGTTTGAGTTTTTAGAATTTCACCATCTTAGAGAAAGTGTTTTACTTTAAAAATTCTTAATTCCGCTGATTCTTATCCATATAATCTAAATTGAACTCCTACTGATGTTGTTTCTATGTATATTCAATGAAATGAAATGGGCATATTTTCATTCTGATATTTATTTATTTATTTATTTTATTCATTTACCTTTTACTAGTTACTGATGCACTCTAGCCATATTTATAATGTAAATGCATTCACTATATTACAGGTGATTTTGTGCTTATCAAATTTGTTTGTTGAATGACACTATCTGTGGCGTGAAGCAGTCATGGCAGATGCTTCAGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGACGGAGTAGATAGGAGAGCTGGTGAACTTCCGGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACAGAAGATAAATTTTCAGGAGATGGTAGAAACAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCGGCTTCTTTATTAGATGAAGATGAACTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGAGATGTGTGAATCCCTAGGAGAAATATTTGAGGTCTGCAGTTTTTATTCTCTCTCGTGCTCTTTCTTTCTTCCTTTCTTTGGACCTTTGATTTTAGAGGTACGTTCTGTAACACAATTGTTTTGCAGATAAGGATAATAAAAGACAAAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGTAGTTGTGGGATTCCTCAAGACTTTGATGTCCTTGTTACTTATTATGTTTCAAAAGCATCAAAGATGCTCTTTTTCACATCTCCATCATTGATAATTTAAAATTGATTTTAGTTCGTCCTTCACACTACAGGGTAAAACGATAAGGTGTTCTCTGTCAGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGTGGAGTTGCAAATTTGTACATCTTCTTTTCTAGAAATCAATGGTTATCGAGGCTTTATGTGCTTTCTTCTGTATAACCTATTGCAGGATCCTCAGAACCCAAATCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCATGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCTCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCTGATAACACTGCTGCTGCTCAGGTAATCAAGTTATCATGACTGGAGAAAATTATACGTGATCTGAATGGCATCTTCAAGTTCCTTGAGATTTTATATCAACTGGAATTCTGTTAAAAACTGTGGTACTAAGGTTAAAAGAGTAAACCAAAACTGTTAATGGGCAGAGAAAAGTCATGCTTCGTGCTGTTTTGTTTTTTCAATTTCAATTACCAAGCAAGGCAACCGGATTTGAAATATCCGAGCCACAAAAATATATTGATTGACCAACTGAACTTTGAGCAAGGAAATGTGGTTACAAAGAGATGCTCATCATGGTGATTTTGAAGGAAATTGCCTAAATTTCTCTTTGAACCAAGCTGCACCTCACTAATCCTAGTACAAACCCTGACAGAATAGTCTGCTGCACCTCACTAATCCTAGTTGGCCACTGACAAGCTTTAGTGAATTGTAACTATTATTTTTAACAAACCATTAGTCTGTCTACTCTTATGCCATAGTTAAATGAAGTAAAGAAAGGAAAACCTAATCATAAAGCTTTTGGTTCTCCTTTGTTCAACCTTCTCACCTATGCATGCTCTTGCTCCCCCACAACAACTAATAAGGAATACTGAAATAAAGCTGAAGATGAAATAGAAATAGTTATATGGTCTTGAACATTCTTTCATTTCTCTCCATGAAATAGTTATATGACTGTCTATTGAGGTGTACTTGAAAGAATTGAATTATAATATGAAATATAATTTAGTCTTCATTACAGGAAGATATTTAAAAGCACGTAATAGTTTGAGTACTACATTGTAATTGGTGAAGTCTATAAAGGCTTGTTTTGTTTTGACATTGATTTCCTGGTTTTATTTATTTGTGCCAGTAAGTTTTTATTGATCTACAACATTATGGATTGCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAACTGAAAGAATTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGTTTAGTTTTTATATTCTCGGAGATTTATATTTTATATCTCAAATGAACAATAACATTCCCTTTTCTTTACGAAAAACGATAAAACATATTTTGGCTTTTATTTCTACTCGTTGATGTGCACATGCATAAACAAATTAGGCTGCAGACTTTTCAGTGAGCCACTCTTTTTCTGAATTGGACGATCTGTTCAACTTATGTATGTAATTTCAGTTACAGCATATCCTCAACATTTAAAAGTAAAGTAGGAAGAATCACCAGTGTCAAGTTGTCTAAACAGATCTGTTGTATTTGACAATGTTCTATAAAGAAAAAAAGTGATGATAAAAGGGACCCAGAAGTGCTTTGTTTGAACTTTTTTCTTGCAATTGCAACCCAAAGTATAATCTTCAGAGATTTTAATCTGCAGGCCAACTTTTGGAGGTTGTTCTTGCAAAGCCTCAAAGTGATAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAACCCATATGGTTCCATTGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGGTAATTTTTTCTTTCTTATCTAAAAAAATTATATTGCACCATCTCGGTTAGGTGCATCTCCCAAAGTGAAAAGAAAAGAAATGAAATATCATCTTTTTTCCTCCACATTAGTCTCATGGATTTTTTTTTTTCATGCAACAGCCAATGATTTATGGTAGGGGACCAATGCCAGCCGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTGTAAGATATCACCCTTACATGGTTTGAAGTCCATTATATATATATAAATATATATATATAATTGTAAATTGTATATATTGTCACTTATGAATGCAGTCAGCAACCTGGAGTACCAATGCCCCCTTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGATCAGGTGGAACAATGGGTCGTTCAGGAGGTAGTAGCAGTAGTGATGATGTCAACCGTGGCAGAAGGTATCGACCCTATTAATTATAAAGAACTGAAGACAATGGGTCCTTAGGCTAAATCACAGGAAATAACAAGATCCCCACTCAGAAACAGAATGTAAAAGAAACTGAACATAAGAGAGAGCTGAGAGGTTTTGAATGACTGAGAAAAGATTGCATTGAGATCCTTTTTCAGGATAAATTGGAGGATGATTTGCTTTTGTGGCAATTCTTATTAACATAGAGTTAAACAAAGAACTTATGTGTACCAAAGCGATGCAGTTGAAAAGTTCTGCTCAAATTTTAAATCTTCTGTTCTCTCTCCTATTGTTCTTGGTGTTCTTTCCAAGGTGGAAATGATGTGTAATCATTGGTGAAGGATAACTTCATTTTTGTTCAATTGTCTTTTGTTAATCTGCGTTTGTTATATTTCTTGCCTGTGGAAGAGTGAACTTATTTATTCCTAAGTTTTAGTTAGATGCTAAGAGAGATTGAGAGGAAAAATAATAGGCTACGGTATGAATTTGCTTGTAGATCATTACAAGTGTTTTAGCCTCTTGTTTCTT

mRNA sequence

GAATAGCTATTTTTGGTATAAAAAGGGCTTTTCAGACATTTCGCCGCACAAACCCGGCAACGGAGAAGAGAGAAAATATTCGCGAGGGAAGAAGACGACGACGTTTAAGTAGATAGAAGATTCGGCTTCCAATTTAGCCCATCCGCCTTCAAGCCCTCGTCGTTTCAGCCCAGAGAGGCTTCGTCTTCTGCACACAAAGGCCCGAATCGAAATAACTCATTCTAAGATATCTTAACGCACCTCTGATTCTCCCCTTCTCTCTGAGGTTCCCAAGCGAACCAAAGGAAATCAACCCAGATACAGAAAACAAAAGGATTCGCTCACAACCAATATTCCAATTCTTGTACCTTCCGAATCCTTCACTTCACTGTCATGGCAGATGCTTCAGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGACGGAGTAGATAGGAGAGCTGGTGAACTTCCGGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACAGAAGATAAATTTTCAGGAGATGGTAGAAACAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCGGCTTCTTTATTAGATGAAGATGAACTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGAGATGTGTGAATCCCTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAAAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGTAGGTAAAACGATAAGGTGTTCTCTGTCAGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAATCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCATGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCTCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCTGATAACACTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAACTGAAAGAATTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTTCTTGCAAAGCCTCAAAGTGATAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAACCCATATGGTTCCATTGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGCCAATGATTTATGGTAGGGGACCAATGCCAGCCGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCTGGAGTACCAATGCCCCCTTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGATCAGGTGGAACAATGGGTCGTTCAGGAGGTAGTAGCAGTAGTGATGATGTCAACCGTGGCAGAAGGTATCGACCCTATTAATTATAAAGAACTGAAGACAATGGGTCCTTAGGCTAAATCACAGGAAATAACAAGATCCCCACTCAGAAACAGAATGTAAAAGAAACTGAACATAAGAGAGAGCTGAGAGGTTTTGAATGACTGAGAAAAGATTGCATTGAGATCCTTTTTCAGGATAAATTGGAGGATGATTTGCTTTTGTGGCAATTCTTATTAACATAGAGTTAAACAAAGAACTTATGTGTACCAAAGCGATGCAGTTGAAAAGTTCTGCTCAAATTTTAAATCTTCTGTTCTCTCTCCTATTGTTCTTGGTGTTCTTTCCAAGGTGGAAATGATGTGTAATCATTGGTGAAGGATAACTTCATTTTTGTTCAATTGTCTTTTGTTAATCTGCGTTTGTTATATTTCTTGCCTGTGGAAGAGTGAACTTATTTATTCCTAAGTTTTAGTTAGATGCTAAGAGAGATTGAGAGGAAAAATAATAGGCTACGGTATGAATTTGCTTGTAGATCATTACAAGTGTTTTAGCCTCTTGTTTCTT

Coding sequence (CDS)

ATGGCAGATGCTTCAGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGACGGAGTAGATAGGAGAGCTGGTGAACTTCCGGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACAGAAGATAAATTTTCAGGAGATGGTAGAAACAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCGGCTTCTTTATTAGATGAAGATGAACTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGAGATGTGTGAATCCCTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAAAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGTAGGTAAAACGATAAGGTGTTCTCTGTCAGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAATCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCATGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCTCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCTGATAACACTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAACTGAAAGAATTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTTCTTGCAAAGCCTCAAAGTGATAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAACCCATATGGTTCCATTGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGCCAATGA

Protein sequence

MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDTEDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKNQMGPIPIYLEVIPTIFFMVDTVVMVETHMVPLVGMVLLLASISQ

Homology

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BLAST of IVF0014312 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 2.3e-128
Identity = 242/376 (64.36%), Postives = 308/376 (81.91%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+DA + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTED---KFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVF 120
               G D ED   + + D  N++ +E+ ++ EK  S +D+++ EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLR++CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRN 240
           KE K GKTIRCSLS++K+RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RN
Sbjct: 181 KEFK-GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240

Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNT-AAAQVKALYVKN 300
           RGFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P+++ AAAQVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300

Query: 301 IPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI 360
           IPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360

Query: 361 EGQLLEVVLAKPQSDK 365
            GQ LEVVLAKPQ+++
Sbjct: 361 NGQPLEVVLAKPQAER 372

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BLAST of IVF0014312 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 5.7e-47
Identity = 96/265 (36.23%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKNQ 367
           E    ++EG+ +E+V AKP   K +
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRK 414

[Close]

BLAST of IVF0014312 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 7.5e-47
Identity = 96/265 (36.23%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKNQ 367
           E    ++EG+ +E+V AKP   K +
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRK 414

[Close]

BLAST of IVF0014312 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.5e-47
Identity = 96/265 (36.23%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 162 KAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 222 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKNQ 367
           E    ++EG+ +E+V AKP   K +
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRK 324

[Close]

BLAST of IVF0014312 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.3e-46
Identity = 96/265 (36.23%), Postives = 160/265 (60.38%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 161
           P  G+EVF+G + RD+ E++L  + E  G I+++R++ D  SG+++GYAFI F  KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 162 KAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 221
           +A++     E++ GK +   +S + +RLF+G++PK+ T +        V  G+ ++ L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 222 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F + G++ +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKNQ 367
           E    EIEG+ +E+VLAKP   K +
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRK 417

[Close]

BLAST of IVF0014312 vs. ExPASy TrEMBL
Match: A0A1S3AUK8 (heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 1.0e-200
Identity = 365/368 (99.18%), Postives = 365/368 (99.18%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 369
           QSDK   G
Sbjct: 361 QSDKKSDG 368

[Close]

BLAST of IVF0014312 vs. ExPASy TrEMBL
Match: A0A5A7TZ47 (Heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00660 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 1.0e-200
Identity = 365/368 (99.18%), Postives = 365/368 (99.18%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 369
           QSDK   G
Sbjct: 361 QSDKKSDG 368

[Close]

BLAST of IVF0014312 vs. ExPASy TrEMBL
Match: A0A5D3DB75 (Heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00650 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 7.4e-199
Identity = 364/368 (98.91%), Postives = 364/368 (98.91%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 369
           QSDK   G
Sbjct: 361 QSDKKSDG 367

[Close]

BLAST of IVF0014312 vs. ExPASy TrEMBL
Match: A0A1S3AUX7 (heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 7.4e-199
Identity = 364/368 (98.91%), Postives = 364/368 (98.91%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 369
           QSDK   G
Sbjct: 361 QSDKKSDG 367

[Close]

BLAST of IVF0014312 vs. ExPASy TrEMBL
Match: A0A6J1FDC4 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444327 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 1.0e-184
Identity = 336/368 (91.30%), Postives = 353/368 (95.92%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRR GE PEEDVEEVSEE Q  T+T
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS DGRNN+S+ESIENR+KSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDV EE
Sbjct: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIE+LHGKEVK GKTIRC
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVK-GKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWT+DEF+RLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSS NFKLDGNSPTVSWADPKS PDN+AA+QVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHG+VTKVNMPPGKAG SKRDFAFIHYAERSSALKAVKETEKYEIEGQ+LEVVLAKP
Sbjct: 301 LFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKP 360

Query: 361 QSDKNQMG 369
           QSDK   G
Sbjct: 361 QSDKKPDG 367

[Close]

BLAST of IVF0014312 vs. NCBI nr
Match: XP_008437829.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo] >XP_008437830.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo])

HSP 1 Score: 707 bits (1824), Expect = 9.57e-254
Identity = 365/368 (99.18%), Postives = 365/368 (99.18%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 368
           QSDK   G
Sbjct: 361 QSDKKSDG 368

[Close]

BLAST of IVF0014312 vs. NCBI nr
Match: KAA0048852.1 (heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 707 bits (1824), Expect = 3.99e-253
Identity = 365/368 (99.18%), Postives = 365/368 (99.18%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 368
           QSDK   G
Sbjct: 361 QSDKKSDG 368

[Close]

BLAST of IVF0014312 vs. NCBI nr
Match: XP_008437831.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo])

HSP 1 Score: 701 bits (1808), Expect = 2.52e-251
Identity = 364/368 (98.91%), Postives = 364/368 (98.91%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 368
           QSDK   G
Sbjct: 361 QSDKKSDG 367

[Close]

BLAST of IVF0014312 vs. NCBI nr
Match: TYK20804.1 (heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 701 bits (1808), Expect = 1.05e-250
Identity = 364/368 (98.91%), Postives = 364/368 (98.91%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 368
           QSDK   G
Sbjct: 361 QSDKKSDG 367

[Close]

BLAST of IVF0014312 vs. NCBI nr
Match: XP_011650655.1 (heterogeneous nuclear ribonucleoprotein Q isoform X1 [Cucumis sativus] >XP_011650656.1 heterogeneous nuclear ribonucleoprotein Q isoform X1 [Cucumis sativus])

HSP 1 Score: 691 bits (1782), Expect = 2.28e-247
Identity = 358/368 (97.28%), Postives = 362/368 (98.37%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKNQMG 368
           QSDK   G
Sbjct: 361 QSDKKSDG 367

[Close]

BLAST of IVF0014312 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-129
Identity = 242/376 (64.36%), Postives = 308/376 (81.91%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+DA + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTED---KFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVF 120
               G D ED   + + D  N++ +E+ ++ EK  S +D+++ EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLR++CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRN 240
           KE K GKTIRCSLS++K+RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RN
Sbjct: 181 KEFK-GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240

Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNT-AAAQVKALYVKN 300
           RGFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P+++ AAAQVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300

Query: 301 IPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI 360
           IPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360

Query: 361 EGQLLEVVLAKPQSDK 365
            GQ LEVVLAKPQ+++
Sbjct: 361 NGQPLEVVLAKPQAER 372

[Close]

BLAST of IVF0014312 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-129
Identity = 242/376 (64.36%), Postives = 308/376 (81.91%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+DA + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTED---KFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVF 120
               G D ED   + + D  N++ +E+ ++ EK  S +D+++ EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLR++CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRN 240
           KE K GKTIRCSLS++K+RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RN
Sbjct: 181 KEFK-GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240

Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNT-AAAQVKALYVKN 300
           RGFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P+++ AAAQVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300

Query: 301 IPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI 360
           IPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360

Query: 361 EGQLLEVVLAKPQSDK 365
            GQ LEVVLAKPQ+++
Sbjct: 361 NGQPLEVVLAKPQAER 372

[Close]

BLAST of IVF0014312 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 449.5 bits (1155), Expect = 2.9e-126
Identity = 238/376 (63.30%), Postives = 302/376 (80.32%), Query Frame = 0


Query: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+DA + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTED---KFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVF 120
               G D ED   + + D  N++ +E+ ++ EK  S +D+++ EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLR++CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRN 240
           KE K   T  CSLS S +RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RN
Sbjct: 181 KEFKASSTANCSLSLS-NRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240

Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNT-AAAQVKALYVKN 300
           RGFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P+++ AAAQVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300

Query: 301 IPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI 360
           IPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360

Query: 361 EGQLLEVVLAKPQSDK 365
            GQ LEVVLAKPQ+++
Sbjct: 361 NGQPLEVVLAKPQAER 372

[Close]

BLAST of IVF0014312 vs. TAIR 10
Match: AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 429.9 bits (1104), Expect = 2.3e-120
Identity = 226/357 (63.31%), Postives = 287/357 (80.39%), Query Frame = 0


Query: 12  DLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDTED---KFSGDG 71
           D  E+  +EE +++ EE  D+D V  +  E  E +VE+  +    G D ED   + + D 
Sbjct: 3   DEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVEDYGDTK--GGDMEDVQEEIAEDD 62

Query: 72  RNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEEDLREMCES 131
            N++ +E+ ++ EK  S +D+++ EK++ LL+LPPHGSEVFIGGL RDV EEDLR++CE 
Sbjct: 63  DNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEE 122

Query: 132 LGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCSLSDSKHR 191
           +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH KE K GKTIRCSLS++K+R
Sbjct: 123 IGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK-GKTIRCSLSETKNR 182

Query: 192 LFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNACADYSRQ 251
           LFIGN+PK+WT+DEFR++IE VGPG        DP N  RNRGFAFVLYYNNACADYSRQ
Sbjct: 183 LFIGNIPKNWTEDEFRKVIEDVGPG--------DPTNTTRNRGFAFVLYYNNACADYSRQ 242

Query: 252 KMSSANFKLDGNSPTVSWADPKSMPDNT-AAAQVKALYVKNIPENTTTEQLKELFQQHGE 311
           KM  +NFKL+GN+PTV+WADPKS P+++ AAAQVKALYVKNIPENT+TEQLKELFQ+HGE
Sbjct: 243 KMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGE 302

Query: 312 VTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDK 365
           VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVVLAKPQ+++
Sbjct: 303 VTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAER 344

[Close]

BLAST of IVF0014312 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 337.0 bits (863), Expect = 2.1e-92
Identity = 170/363 (46.83%), Postives = 256/363 (70.52%), Query Frame = 0


Query: 3   DASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDTED 62
           D+ E EERVDL+ DN  EE+   +EE V+ +       E+ EE++EE+ EE +       
Sbjct: 13  DSMESEERVDLDGDNDPEEI---LEEEVEYE-------EVEEEEIEEIEEEIE------- 72

Query: 63  KFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEEDL 122
                    + VE  E  E + +  +E+E ++H +LLALPPHGSEV++GG+  D  E DL
Sbjct: 73  -------EEVEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132

Query: 123 REMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCSL 182
           +  C S+GE+ E+RI+++KDSG+ KGYAF+ F++K+ A +AI+ L+  + + GK I+CS 
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFR-GKRIKCST 192

Query: 183 SDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNAC 242
           + +KHRLF+GNVP++W + + ++    +GPGV+ +EL K+PQN  RNRGFAF+ YYN+AC
Sbjct: 193 TQAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHAC 252

Query: 243 ADYSRQKMSSANFKLDGNSPTVSWADPKS-MPDNTAAAQVKALYVKNIPENTTTEQLKEL 302
           A+YS+QKMS+ +FKLD N+PTVSWA+ +S    +++A+QVKALY+KN+P + T E+LK L
Sbjct: 253 AEYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKAL 312

Query: 303 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 362
           F+ HG++ KV +PP K G     + F+HYAER+S ++A+K TE+YEI+G +L+  LAKPQ
Sbjct: 313 FEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQ 350

Query: 363 SDK 365
           +D+
Sbjct: 373 ADQ 350

The following BLAST results are available for this feature:

BLAST of IVF0014312 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	2.3e-128	64.36	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O60506	5.7e-47	36.23	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	7.5e-47	36.23	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]
Q7TP47	7.5e-47	36.23	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]
O43390	6.3e-46	36.23	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]

BLAST of IVF0014312 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUK8	1.0e-200	99.18	heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7TZ47	1.0e-200	99.18	Heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo var. makuwa...	[more]
A0A5D3DB75	7.4e-199	98.91	Heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo var. makuwa...	[more]
A0A1S3AUX7	7.4e-199	98.91	heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1FDC4	1.0e-184	91.30	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita moschata ...	[more]

BLAST of IVF0014312 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437829.1	9.57e-254	99.18	PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo] >...	[more]
KAA0048852.1	3.99e-253	99.18	heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008437831.1	2.52e-251	98.91	PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo]	[more]
TYK20804.1	1.05e-250	98.91	heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo var. makuwa]	[more]
XP_011650655.1	2.28e-247	97.28	heterogeneous nuclear ribonucleoprotein Q isoform X1 [Cucumis sativus] >XP_01165...	[more]

BLAST of IVF0014312 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00830.1	1.6e-129	64.36	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	1.6e-129	64.36	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	2.9e-126	63.30	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.3	2.3e-120	63.31	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.1	2.1e-92	46.83	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 188..265 e-value: 2.3E-11 score: 53.8 coord: 107..181 e-value: 5.6E-25 score: 99.0 coord: 283..356 e-value: 1.1E-17 score: 74.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 189..255 e-value: 1.9E-9 score: 37.2 coord: 284..353 e-value: 5.9E-16 score: 58.1 coord: 108..173 e-value: 8.8E-19 score: 67.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 282..360 score: 15.869082
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 106..185 score: 19.689491
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 187..269 score: 12.372725
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 107..181 e-value: 1.7E-5 score: 34.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 273..369 e-value: 5.1E-21 score: 77.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 188..268 e-value: 1.1E-19 score: 72.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..187 e-value: 2.0E-27 score: 98.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..30
None	No IPR available	PANTHER	PTHR48024:SF13	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Q	coord: 2..372
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 2..372
None	No IPR available	CDD	cd00590	RRM_SF	coord: 108..181 e-value: 1.8002E-21 score: 85.4345
None	No IPR available	CDD	cd12251	RRM3_hnRNPR_like	coord: 281..360 e-value: 1.01899E-30 score: 110.792
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 188..273
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 103..364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014312.4	IVF0014312.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding