IVF0014240 (gene) Melon (IVF77) v1

Overview
NameIVF0014240
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposase
Locationchr04: 19208639 .. 19208821 (-)
RNA-Seq ExpressionIVF0014240
SyntenyIVF0014240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTACCAACTGATGAGGACTTAACACTTGGATTGGACGAGGTTGAAATAGGTTTGGATAATGCACATACGGATCACTTAGAACAAGTTGATGCATCAAAAAACGAGAAGAAGAAAACAAGAGGACTAACATTGATGCATGGTGTTACAAGAATTAAGAGTACGGGGAGAAAACAGTAG

mRNA sequence

ATGGAGCTACCAACTGATGAGGACTTAACACTTGGATTGGACGAGGTTGAAATAGGTTTGGATAATGCACATACGGATCACTTAGAACAAGTTGATGCATCAAAAAACGAGAAGAAGAAAACAAGAGGACTAACATTGATGCATGGTGTTACAAGAATTAAGAGTACGGGGAGAAAACAGTAG

Coding sequence (CDS)

ATGGAGCTACCAACTGATGAGGACTTAACACTTGGATTGGACGAGGTTGAAATAGGTTTGGATAATGCACATACGGATCACTTAGAACAAGTTGATGCATCAAAAAACGAGAAGAAGAAAACAAGAGGACTAACATTGATGCATGGTGTTACAAGAATTAAGAGTACGGGGAGAAAACAGTAG

Protein sequence

MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRKQ
Homology
[Close]
BLAST of IVF0014240 vs. ExPASy TrEMBL
Match: A0A5A7UH54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12739G00010 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.7e-23
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0 

Query: 1  MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 60
          MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTG K
Sbjct: 1  MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGEK 59

[Close]
BLAST of IVF0014240 vs. ExPASy TrEMBL
Match: A0A5D3DHZ4 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00040 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.7e-22
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 1   MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 60
           MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMH VTRIKSTG K
Sbjct: 904 MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHDVTRIKSTGEK 962

[Close]
BLAST of IVF0014240 vs. ExPASy TrEMBL
Match: A0A5D3DH49 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001150 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.7e-22
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 1   MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 60
           MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMH VTRIKSTG K
Sbjct: 794 MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHDVTRIKSTGEK 852

[Close]
BLAST of IVF0014240 vs. ExPASy TrEMBL
Match: A0A5A7TC55 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold540G00090 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.7e-22
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 1   MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 60
           MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMH VTRIKSTG K
Sbjct: 127 MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHDVTRIKSTGEK 185

[Close]
BLAST of IVF0014240 vs. ExPASy TrEMBL
Match: A0A5D3DNH1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001280 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.7e-22
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 1   MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 60
           MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMH VTRIKSTG K
Sbjct: 620 MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHDVTRIKSTGEK 678

[Close]
BLAST of IVF0014240 vs. NCBI nr
Match: KAA0053556.1 (hypothetical protein E6C27_scaffold190G001220 [Cucumis melo var. makuwa] >TYK00052.1 hypothetical protein E5676_scaffold12739G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (284), Expect = 2.10e-31
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0 

Query: 1  MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 59
          MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTG K
Sbjct: 1  MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGEK 59

[Close]
BLAST of IVF0014240 vs. NCBI nr
Match: TYK10974.1 (hypothetical protein E5676_scaffold874G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (269), Expect = 8.20e-27
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0 

Query: 1   MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 59
           MEL TDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMH VTRIKSTG K
Sbjct: 132 MELSTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHDVTRIKSTGEK 190

[Close]
BLAST of IVF0014240 vs. NCBI nr
Match: KAA0040673.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (277), Expect = 1.10e-26
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 1   MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 59
           MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMH VTRIKSTG K
Sbjct: 127 MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHDVTRIKSTGEK 185

[Close]
BLAST of IVF0014240 vs. NCBI nr
Match: TYK24859.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (277), Expect = 1.37e-26
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 1   MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 59
           MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMH VTRIKSTG K
Sbjct: 620 MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHDVTRIKSTGEK 678

[Close]
BLAST of IVF0014240 vs. NCBI nr
Match: TYK01009.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (277), Expect = 1.38e-26
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 1   MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHGVTRIKSTGRK 59
           MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMH VTRIKSTG K
Sbjct: 677 MELPTDEDLTLGLDEVEIGLDNAHTDHLEQVDASKNEKKKTRGLTLMHDVTRIKSTGEK 735

The following BLAST results are available for this feature:
BLAST of IVF0014240 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0014240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UH545.7e-2398.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DHZ43.7e-2296.61ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3DH493.7e-2296.61Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001150 P... [more]
A0A5A7TC553.7e-2296.61Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3DNH13.7e-2296.61Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001280 P... [more]
BLAST of IVF0014240 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0053556.12.10e-3198.31hypothetical protein E6C27_scaffold190G001220 [Cucumis melo var. makuwa] >TYK000... [more]
TYK10974.18.20e-2794.92hypothetical protein E5676_scaffold874G00010 [Cucumis melo var. makuwa][more]
KAA0040673.11.10e-2696.61putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
TYK24859.11.37e-2696.61transposase [Cucumis melo var. makuwa][more]
TYK01009.11.38e-2696.61transposase [Cucumis melo var. makuwa][more]
BLAST of IVF0014240 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0014240.1IVF0014240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0016301 kinase activity