Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACTATCAGCTTCAAAACGAGTCAGAAACTCACTTACCAACTCGCCCGAATTTGACTCAGCCTGCAATTCAACCTTCTCCCACTGCCTTGCCCTAACACAGCACGCATACAACGGCGTTTTCCCCTATCAACTCTGCACCGCCGCCGACCACCTTCACCACCTCCTCACCGTCGTCCAGCCGCATCCACTAATCACCAACTGGCTTCCCTCTCCCCCGACTCGTCTCCAAGTGGACTCAGCACTACGAGCCGTCAATCGCGATGACTCGGATTGTGAAGGCGAAACACTAGGACTGATCCGGTTTCAGCGTTGGGCGATTGAACTATTCGCAGAGGCTGTGGTGAAGAACGTGGGAAAGAAAGTGATGGTTCGAGTTCCGATGGGAATTGCCGGAATCGCCGGAATCGGCGCCGTGACTCGGTCTGGAAAGGATGTGGTTGGAGCTGTGGTTGCAGTGTACGCGCTCGGCGTTGCCACTTCGATATATCTCAGCTTATCGGGATAG
mRNA sequence
ATGGGACTATCAGCTTCAAAACGAGTCAGAAACTCACTTACCAACTCGCCCGAATTTGACTCAGCCTGCAATTCAACCTTCTCCCACTGCCTTGCCCTAACACAGCACGCATACAACGGCGTTTTCCCCTATCAACTCTGCACCGCCGCCGACCACCTTCACCACCTCCTCACCGTCGTCCAGCCGCATCCACTAATCACCAACTGGCTTCCCTCTCCCCCGACTCGTCTCCAAGTGGACTCAGCACTACGAGCCGTCAATCGCGATGACTCGGATTGTGAAGGCGAAACACTAGGACTGATCCGGTTTCAGCGTTGGGCGATTGAACTATTCGCAGAGGCTGTGGTGAAGAACGTGGGAAAGAAAGTGATGGTTCGAGTTCCGATGGGAATTGCCGGAATCGCCGGAATCGGCGCCGTGACTCGGTCTGGAAAGGATGTGGTTGGAGCTGTGGTTGCAGTGTACGCGCTCGGCGTTGCCACTTCGATATATCTCAGCTTATCGGGATAG
Coding sequence (CDS)
ATGGGACTATCAGCTTCAAAACGAGTCAGAAACTCACTTACCAACTCGCCCGAATTTGACTCAGCCTGCAATTCAACCTTCTCCCACTGCCTTGCCCTAACACAGCACGCATACAACGGCGTTTTCCCCTATCAACTCTGCACCGCCGCCGACCACCTTCACCACCTCCTCACCGTCGTCCAGCCGCATCCACTAATCACCAACTGGCTTCCCTCTCCCCCGACTCGTCTCCAAGTGGACTCAGCACTACGAGCCGTCAATCGCGATGACTCGGATTGTGAAGGCGAAACACTAGGACTGATCCGGTTTCAGCGTTGGGCGATTGAACTATTCGCAGAGGCTGTGGTGAAGAACGTGGGAAAGAAAGTGATGGTTCGAGTTCCGATGGGAATTGCCGGAATCGCCGGAATCGGCGCCGTGACTCGGTCTGGAAAGGATGTGGTTGGAGCTGTGGTTGCAGTGTACGCGCTCGGCGTTGCCACTTCGATATATCTCAGCTTATCGGGATAG
Protein sequence
MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVVQPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVGKKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG
Homology
BLAST of IVF0014188 vs. ExPASy TrEMBL
Match:
A0A5D3D2N6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001950 PE=4 SV=1)
HSP 1 Score: 332.8 bits (852), Expect = 8.4e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV
Sbjct: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG
Sbjct: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
Query: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 170
KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG
Sbjct: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 169
BLAST of IVF0014188 vs. ExPASy TrEMBL
Match:
A0A1S3BXX1 (uncharacterized protein LOC103494601 OS=Cucumis melo OX=3656 GN=LOC103494601 PE=4 SV=1)
HSP 1 Score: 332.8 bits (852), Expect = 8.4e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV
Sbjct: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG
Sbjct: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
Query: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 170
KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG
Sbjct: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 169
BLAST of IVF0014188 vs. ExPASy TrEMBL
Match:
A0A0A0KVZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011030 PE=4 SV=1)
HSP 1 Score: 311.2 bits (796), Expect = 2.6e-81
Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MG+SASKRVRNSLTNS EFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV
Sbjct: 34 MGISASKRVRNSLTNSHEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 93
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
QPHPLITNWLPSPPTRLQVDSALRAVNRDDSD E E LGLI F RWAIELFAEAVVKNVG
Sbjct: 94 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDREDEALGLILFNRWAIELFAEAVVKNVG 153
Query: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 170
KKVMVRVP+GIAGIAGIGAVTRSGKDVVG VVAVYALGVATS+YLSLSG
Sbjct: 154 KKVMVRVPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSVYLSLSG 202
BLAST of IVF0014188 vs. ExPASy TrEMBL
Match:
A0A6J1F2Z4 (uncharacterized protein LOC111439202 OS=Cucurbita moschata OX=3662 GN=LOC111439202 PE=4 SV=1)
HSP 1 Score: 275.4 bits (703), Expect = 1.6e-70
Identity = 141/170 (82.94%), Postives = 155/170 (91.18%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MG+SASKRVRNSL+NSP+FDSAC+STFSHCL LTQHAY GVFPYQLCTAADHLH LLT V
Sbjct: 1 MGISASKRVRNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEG-ETLGLIRFQRWAIELFAEAVVKNV 120
+PHPLI WLPSPPTR QVDSALRAVNR+D+D E ETLG IRF+RWA+ELFAEAVVKNV
Sbjct: 61 RPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GKKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 170
K+VM RVP+GIAGIAGIGAVTRSGKD+VG +VAVYALGVATS+YL LSG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG 170
BLAST of IVF0014188 vs. ExPASy TrEMBL
Match:
A0A6J1I3X0 (uncharacterized protein LOC111470752 OS=Cucurbita maxima OX=3661 GN=LOC111470752 PE=4 SV=1)
HSP 1 Score: 271.2 bits (692), Expect = 3.0e-69
Identity = 139/170 (81.76%), Postives = 155/170 (91.18%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MG+SASKRV+NSL+NSP+FDSAC+STFSHCL LTQHAY GVFPYQLCTAADHLH LLT V
Sbjct: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEG-ETLGLIRFQRWAIELFAEAVVKNV 120
+PHPLI+ WLPSPPTRLQVDSAL+AVNR D+ E ETLG IRF+ WAIELFAEAVVKNV
Sbjct: 61 RPHPLISKWLPSPPTRLQVDSALQAVNRGDAGREDEETLGPIRFKHWAIELFAEAVVKNV 120
Query: 121 GKKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 170
K+VM RVP+GIAGIAGIGAVTRSGKD+VG++VAVYALGVATS+YL LSG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVGSMVAVYALGVATSMYLGLSG 170
BLAST of IVF0014188 vs. NCBI nr
Match:
XP_008454080.1 (PREDICTED: uncharacterized protein LOC103494601 [Cucumis melo] >KAA0044537.1 uncharacterized protein E6C27_scaffold46G002840 [Cucumis melo var. makuwa] >TYK17046.1 uncharacterized protein E5676_scaffold130G001950 [Cucumis melo var. makuwa])
HSP 1 Score: 327 bits (837), Expect = 1.63e-112
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV
Sbjct: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG
Sbjct: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
Query: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 169
KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG
Sbjct: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 169
BLAST of IVF0014188 vs. NCBI nr
Match:
XP_004152139.2 (uncharacterized protein LOC101220555 [Cucumis sativus])
HSP 1 Score: 305 bits (781), Expect = 1.77e-103
Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MG+SASKRVRNSLTNS EFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV
Sbjct: 34 MGISASKRVRNSLTNSHEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 93
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
QPHPLITNWLPSPPTRLQVDSALRAVNRDDSD E E LGLI F RWAIELFAEAVVKNVG
Sbjct: 94 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDREDEALGLILFNRWAIELFAEAVVKNVG 153
Query: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 169
KKVMVRVP+GIAGIAGIGAVTRSGKDVVG VVAVYALGVATS+YLSLSG
Sbjct: 154 KKVMVRVPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSVYLSLSG 202
BLAST of IVF0014188 vs. NCBI nr
Match:
XP_038878178.1 (uncharacterized protein LOC120070324 [Benincasa hispida])
HSP 1 Score: 295 bits (754), Expect = 7.35e-100
Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MG+SASKRVRNSLTNS EFD ACNSTFSHCLALTQHAY+GVFPYQLC AADHLHHL+TVV
Sbjct: 1 MGISASKRVRNSLTNSLEFDLACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLITVV 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
+PHPLI NWLPSPPTRLQVDSALRAVNRDDSD EGETLG IRF+ WAIELFAEAV KNVG
Sbjct: 61 RPHPLIANWLPSPPTRLQVDSALRAVNRDDSDREGETLGPIRFKHWAIELFAEAVAKNVG 120
Query: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 169
KKVM+RVP+GIAGIAGIGAVTRSGKDVVG VVAVYALGVATS+YLSLSG
Sbjct: 121 KKVMLRVPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSVYLSLSG 169
BLAST of IVF0014188 vs. NCBI nr
Match:
KAE8649089.1 (hypothetical protein Csa_014602 [Cucumis sativus])
HSP 1 Score: 294 bits (752), Expect = 2.49e-99
Identity = 153/163 (93.87%), Postives = 156/163 (95.71%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MG+SASKRVRNSLTNS EFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV
Sbjct: 1 MGISASKRVRNSLTNSHEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
QPHPLITNWLPSPPTRLQVDSALRAVNRDDSD E E LGLI F RWAIELFAEAVVKNVG
Sbjct: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDREDEALGLILFNRWAIELFAEAVVKNVG 120
Query: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSI 163
KKVMVRVP+GIAGIAGIGAVTRSGKDVVG VVAVYALGVATS+
Sbjct: 121 KKVMVRVPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSL 163
BLAST of IVF0014188 vs. NCBI nr
Match:
XP_022932745.1 (uncharacterized protein LOC111439202 [Cucurbita moschata])
HSP 1 Score: 269 bits (688), Expect = 8.70e-90
Identity = 141/170 (82.94%), Postives = 155/170 (91.18%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MG+SASKRVRNSL+NSP+FDSAC+STFSHCL LTQHAY GVFPYQLCTAADHLH LLT V
Sbjct: 1 MGISASKRVRNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGE-TLGLIRFQRWAIELFAEAVVKNV 120
+PHPLI WLPSPPTR QVDSALRAVNR+D+D E E TLG IRF+RWA+ELFAEAVVKNV
Sbjct: 61 RPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GKKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLSG 169
K+VM RVP+GIAGIAGIGAVTRSGKD+VG +VAVYALGVATS+YL LSG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG 170
BLAST of IVF0014188 vs. TAIR 10
Match:
AT2G43540.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 181.8 bits (460), Expect = 4.6e-46
Identity = 96/169 (56.80%), Postives = 127/169 (75.15%), Query Frame = 0
Query: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
MG+S SKRV L+NSPEFDSAC+S + L+L QHA+ GV PYQL +AA H+H L+ +
Sbjct: 1 MGISGSKRVTTILSNSPEFDSACDSAYDESLSLAQHAFAGVRPYQLVSAAAHIHRNLSAL 60
Query: 61 QPHPLITNWLPSPPTRLQVDSALR-AVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNV 120
+ PLIT WL SPP++ QVDSALR V+R + E E LG F++WA+E+FAEAVV N
Sbjct: 61 R-FPLITRWLSSPPSQSQVDSALRVTVSRVTAADEEEILGQEEFKKWAVEVFAEAVVGNA 120
Query: 121 GKKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLS 169
K + R+P+GI GI GIGAVTRSG++++GA + VYA+GVATS++LSL+
Sbjct: 121 RKTIASRIPLGIVGIGGIGAVTRSGQNLIGAAIGVYAIGVATSVFLSLT 168
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3D2N6 | 8.4e-88 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BXX1 | 8.4e-88 | 100.00 | uncharacterized protein LOC103494601 OS=Cucumis melo OX=3656 GN=LOC103494601 PE=... | [more] |
A0A0A0KVZ1 | 2.6e-81 | 94.08 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011030 PE=4 SV=1 | [more] |
A0A6J1F2Z4 | 1.6e-70 | 82.94 | uncharacterized protein LOC111439202 OS=Cucurbita moschata OX=3662 GN=LOC1114392... | [more] |
A0A6J1I3X0 | 3.0e-69 | 81.76 | uncharacterized protein LOC111470752 OS=Cucurbita maxima OX=3661 GN=LOC111470752... | [more] |
Match Name | E-value | Identity | Description | |
XP_008454080.1 | 1.63e-112 | 100.00 | PREDICTED: uncharacterized protein LOC103494601 [Cucumis melo] >KAA0044537.1 unc... | [more] |
XP_004152139.2 | 1.77e-103 | 94.08 | uncharacterized protein LOC101220555 [Cucumis sativus] | [more] |
XP_038878178.1 | 7.35e-100 | 89.94 | uncharacterized protein LOC120070324 [Benincasa hispida] | [more] |
KAE8649089.1 | 2.49e-99 | 93.87 | hypothetical protein Csa_014602 [Cucumis sativus] | [more] |
XP_022932745.1 | 8.70e-90 | 82.94 | uncharacterized protein LOC111439202 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT2G43540.1 | 4.6e-46 | 56.80 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |