IVF0014089 (gene) Melon (IVF77) v1

Overview


Name	IVF0014089
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein TIC 214
Location	tig00000662: 184836 .. 185321 (+)
RNA-Seq Expression	IVF0014089
Synteny	IVF0014089

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAAACCATAGGTATTTCATTAGTTCATAAGAATAAGTACCAATTTAATCAAAAATATCAAGAAAAAGGCTATCCTTATAAGAGGAGTTTTGCTGAATCCATTGCAATACCTCAAAAAATGACTGAAAATAGAACCAGCAATTATTATGATTTGCTTGTTCCGGAAAATATCTTATCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAATTTGTTTCAATTCTGGGAATAAAAATGATATCCAGAGAAATACAGCATTTTACAATGGAAATAAGGTGAAAACAGATGATCAAGTTTTAGATAAAACAAGCAAACATCTTGATAGATATCAAAATCAACTAAAAAAATTAAAGTTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGCTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGCAAATTAGTTAA

mRNA sequence

ATGTCTCAAACCATAGGTATTTCATTAGTTCATAAGAATAAGTACCAATTTAATCAAAAATATCAAGAAAAAGGCTATCCTTATAAGAGGAGTTTTGCTGAATCCATTGCAATACCTCAAAAAATGACTGAAAATAGAACCAGCAATTATTATGATTTGCTTGTTCCGGAAAATATCTTATCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAATTTGTTTCAATTCTGGGAATAAAAATGATATCCAGAGAAATACAGCATTTTACAATGGAAATAAGGTGAAAACAGATGATCAAGTTTTAGATAAAACAAGCAAACATCTTGATAGATATCAAAATCAACTAAAAAAATTAAAGTTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGCTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGCAAATTAGTTAA

Coding sequence (CDS)

ATGTCTCAAACCATAGGTATTTCATTAGTTCATAAGAATAAGTACCAATTTAATCAAAAATATCAAGAAAAAGGCTATCCTTATAAGAGGAGTTTTGCTGAATCCATTGCAATACCTCAAAAAATGACTGAAAATAGAACCAGCAATTATTATGATTTGCTTGTTCCGGAAAATATCTTATCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAATTTGTTTCAATTCTGGGAATAAAAATGATATCCAGAGAAATACAGCATTTTACAATGGAAATAAGGTGAAAACAGATGATCAAGTTTTAGATAAAACAAGCAAACATCTTGATAGATATCAAAATCAACTAAAAAAATTAAAGTTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGCTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGCAAATTAGTTAA

Protein sequence

MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENILSPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS

Homology

[Close]

BLAST of IVF0014089 vs. ExPASy Swiss-Prot
Match: Q4VZL0 (Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 301.6 bits (771), Expect = 5.3e-81
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLV KNKYQ NQ+YQEKGYPYKRSFAESIAI QK TENRTSN+YDLLVPENIL
Sbjct: 1719 MSQTIGISLVQKNKYQLNQRYQEKGYPYKRSFAESIAIHQKRTENRTSNHYDLLVPENIL 1778

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDI RNTAF +GNKVKTDDQVLDK SKHLDRYQNQLK LK 
Sbjct: 1779 SPRGRREFRILICFNSGNKNDIHRNTAFDDGNKVKTDDQVLDKRSKHLDRYQNQLKNLKL 1838

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQI 161
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQL+I
Sbjct: 1839 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKI 1878

[Close]

BLAST of IVF0014089 vs. ExPASy Swiss-Prot
Match: Q7YJS6 (Protein TIC 214 OS=Calycanthus floridus var. glaucus OX=212734 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 104/156 (66.67%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            M QTIGISLVHKNK+Q N++Y+EK Y  +  F  SIA   KM  NR  N YDLLVPENIL
Sbjct: 1668 MYQTIGISLVHKNKHQTNRRYREKRYVDENYFDGSIAQHGKMLVNRAENDYDLLVPENIL 1727

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPR RRE RILI FNSGN+N + RN  F+NGN VK   Q LD+  KH+D   N+  + K 
Sbjct: 1728 SPRRRRELRILISFNSGNRNVVDRNLVFFNGNNVKNFGQFLDE-DKHIDTDINKFIQFKL 1787

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYP 157
            FLWPNYRLEDLAC+NRYWFDTNN SRFSMLRIHMYP
Sbjct: 1788 FLWPNYRLEDLACINRYWFDTNNGSRFSMLRIHMYP 1822

[Close]

BLAST of IVF0014089 vs. ExPASy Swiss-Prot
Match: Q09WW0 (Protein TIC 214 OS=Morus indica OX=248361 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.2e-50
Identity = 103/159 (64.78%), Postives = 120/159 (75.47%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            M QTIGISLVHK+K+  NQ+Y+EKG    ++F E I+  QKMTENR  N+YDL VPE IL
Sbjct: 1703 MYQTIGISLVHKSKHTINQRYREKGLVDTKNFDEFISKHQKMTENRDKNHYDLFVPETIL 1762

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPR RRE RILICFNS N+N I  N  F N NKVK+   VL+K+  +    QN + +LKF
Sbjct: 1763 SPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKS--PVLNKSKIN----QNNIIRLKF 1822

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQ 160
            FLWPNYRLED ACMNRYWFDTNN SRFSM+RIHMYPQ +
Sbjct: 1823 FLWPNYRLEDFACMNRYWFDTNNGSRFSMVRIHMYPQFK 1855

[Close]

BLAST of IVF0014089 vs. ExPASy Swiss-Prot
Match: A0ZZ93 (Protein TIC 214 OS=Gossypium barbadense OX=3634 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.7e-50
Identity = 105/158 (66.46%), Postives = 118/158 (74.68%), Query Frame = 0


Query: 3    QTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENILSP 62
            QTI I LVHKNK+Q NQ+YQEK Y  K  F E IA  QKMTEN+  N+YDL VPENILSP
Sbjct: 1734 QTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSP 1793

Query: 63   RGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKFFL 122
              RRE RI I FNS +KN + RN  F   N VK   QVL K +KHLD  + +L KLKFFL
Sbjct: 1794 NHRRELRIRISFNSRDKNGMHRNAVFL--NNVKNCGQVLTK-NKHLDSDKKKLIKLKFFL 1853

Query: 123  WPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQI 161
            WPNYRLEDLACMNRYWF+TNN SRFSM+RI MYP+L+I
Sbjct: 1854 WPNYRLEDLACMNRYWFNTNNGSRFSMIRIRMYPRLKI 1888

[Close]

BLAST of IVF0014089 vs. ExPASy Swiss-Prot
Match: Q2L951 (Protein TIC 214 OS=Gossypium hirsutum OX=3635 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.7e-50
Identity = 105/158 (66.46%), Postives = 118/158 (74.68%), Query Frame = 0


Query: 3    QTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENILSP 62
            QTI I LVHKNK+Q NQ+YQEK Y  K  F E IA  QKMTEN+  N+YDL VPENILSP
Sbjct: 1737 QTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSP 1796

Query: 63   RGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKFFL 122
              RRE RI I FNS +KN + RN  F   N VK   QVL K +KHLD  + +L KLKFFL
Sbjct: 1797 NHRRELRIRISFNSRDKNGMHRNAVFL--NNVKNCGQVLTK-NKHLDSDKKKLIKLKFFL 1856

Query: 123  WPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQI 161
            WPNYRLEDLACMNRYWF+TNN SRFSM+RI MYP+L+I
Sbjct: 1857 WPNYRLEDLACMNRYWFNTNNGSRFSMIRIRMYPRLKI 1891

[Close]

BLAST of IVF0014089 vs. ExPASy TrEMBL
Match: A0A1S4EU70 (Protein TIC 214 OS=Cucumis melo OX=3656 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.0e-88
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

[Close]

BLAST of IVF0014089 vs. ExPASy TrEMBL
Match: A0A249RZN8 (Protein TIC 214 OS=Cucumis melo var. cantalupensis OX=3658 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.0e-88
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

[Close]

BLAST of IVF0014089 vs. ExPASy TrEMBL
Match: A0A286NG49 (Protein TIC 214 OS=Cucumis melo var. flexuosus OX=1120798 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.0e-88
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

[Close]

BLAST of IVF0014089 vs. ExPASy TrEMBL
Match: A0A249RZ44 (Protein TIC 214 OS=Cucumis melo var. dudaim OX=2034236 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.0e-88
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

[Close]

BLAST of IVF0014089 vs. ExPASy TrEMBL
Match: A0A249RYD6 (Protein TIC 214 OS=Cucumis melo var. conomon OX=3657 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.0e-88
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

[Close]

BLAST of IVF0014089 vs. NCBI nr
Match: QRW36614.1 (Ycf1 [Cucumis melo])

HSP 1 Score: 332 bits (852), Expect = 1.80e-102
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1434 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1493

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1494 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1553

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 161
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1554 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1594

[Close]

BLAST of IVF0014089 vs. NCBI nr
Match: ASY96481.1 (Ycf1 [Cucumis melo subsp. agrestis])

HSP 1 Score: 332 bits (852), Expect = 3.09e-102
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 161
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

[Close]

BLAST of IVF0014089 vs. NCBI nr
Match: ASY96829.1 (Ycf1 [Cucumis melo var. momordica] >ASY97003.1 Ycf1 [Cucumis melo var. cantalupo] >ASY97351.1 Ycf1 [Cucumis melo var. flexuosus] >ASY97090.1 Ycf1 [Cucumis melo var. cantalupo] >ASY97264.1 Ycf1 [Cucumis melo var. cantalupo])

HSP 1 Score: 332 bits (852), Expect = 3.09e-102
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 161
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

[Close]

BLAST of IVF0014089 vs. NCBI nr
Match: ASY96568.1 (Ycf1 [Cucumis melo subsp. agrestis])

HSP 1 Score: 332 bits (852), Expect = 3.09e-102
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 161
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

[Close]

BLAST of IVF0014089 vs. NCBI nr
Match: YP_004841843.1 (hypothetical chloroplast RF19 [Cucumis melo subsp. melo] >YP_009860133.1 hypothetical chloroplast RF19 [Cucumis melo subsp. agrestis] >ASY96655.1 Ycf1 [Cucumis melo var. conomon] >ASY96742.1 Ycf1 [Cucumis melo var. makuwa] >ASY97177.1 Ycf1 [Cucumis melo var. inodorus] >QJF46444.1 Ycf1 [Cucumis melo] >AEM76953.1 hypothetical chloroplast RF19 [Cucumis melo subsp. melo])

HSP 1 Score: 332 bits (852), Expect = 3.09e-102
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 60
            MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL
Sbjct: 1705 MSQTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENIL 1764

Query: 61   SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 120
            SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF
Sbjct: 1765 SPRGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKF 1824

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 161
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS
Sbjct: 1825 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQIS 1865

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BLAST of IVF0014089 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 154.8 bits (390), Expect = 5.7e-38
Identity = 81/158 (51.27%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 3    QTIGISLVHKNKYQFNQKYQEKGYPYKRSFAESIAIPQKMTENRTSNYYDLLVPENILSP 62
            +TIGISLVHKNK++ +++Y++K Y  K+ F +SI   Q  T N+  N YD  VPE ILSP
Sbjct: 1629 RTIGISLVHKNKHKISKRYKKKSYINKKFFEKSITKYQNKTVNKKKNNYDFFVPEKILSP 1688

Query: 63   RGRREFRILICFNSGNKNDIQRNTAFYNGNKVKTDDQVLDKTSKHLDRYQNQLKKLKFFL 122
            + RREFRILICFN   KN    N+ F + N       +  K    LD+ +N L  LK FL
Sbjct: 1689 KRRREFRILICFNLKKKNARDTNSRF-DKNIQNLTTVLHKKKDLDLDKDKNNLINLKSFL 1748

Query: 123  WPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLQI 161
            WPN++LEDLACMNRYWF+T N + FSM+RI MY +  I
Sbjct: 1749 WPNFKLEDLACMNRYWFNTTNGNHFSMIRIRMYTRFPI 1785

The following BLAST results are available for this feature:

BLAST of IVF0014089 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZL0	5.3e-81	91.88	Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2	[more]
Q7YJS6	3.4e-51	66.67	Protein TIC 214 OS=Calycanthus floridus var. glaucus OX=212734 GN=TIC214 PE=3 SV...	[more]
Q09WW0	2.2e-50	64.78	Protein TIC 214 OS=Morus indica OX=248361 GN=TIC214 PE=3 SV=1	[more]
A0ZZ93	3.7e-50	66.46	Protein TIC 214 OS=Gossypium barbadense OX=3634 GN=TIC214 PE=3 SV=1	[more]
Q2L951	3.7e-50	66.46	Protein TIC 214 OS=Gossypium hirsutum OX=3635 GN=TIC214 PE=3 SV=1	[more]

BLAST of IVF0014089 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4EU70	8.0e-88	100.00	Protein TIC 214 OS=Cucumis melo OX=3656 GN=ycf1 PE=3 SV=1	[more]
A0A249RZN8	8.0e-88	100.00	Protein TIC 214 OS=Cucumis melo var. cantalupensis OX=3658 GN=ycf1 PE=3 SV=1	[more]
A0A286NG49	8.0e-88	100.00	Protein TIC 214 OS=Cucumis melo var. flexuosus OX=1120798 GN=ycf1 PE=3 SV=1	[more]
A0A249RZ44	8.0e-88	100.00	Protein TIC 214 OS=Cucumis melo var. dudaim OX=2034236 GN=ycf1 PE=3 SV=1	[more]
A0A249RYD6	8.0e-88	100.00	Protein TIC 214 OS=Cucumis melo var. conomon OX=3657 GN=ycf1 PE=3 SV=1	[more]

BLAST of IVF0014089 vs. NCBI nr


Match Name	E-value	Identity	Description
QRW36614.1	1.80e-102	100.00	Ycf1 [Cucumis melo]	[more]
ASY96481.1	3.09e-102	100.00	Ycf1 [Cucumis melo subsp. agrestis]	[more]
ASY96829.1	3.09e-102	100.00	Ycf1 [Cucumis melo var. momordica] >ASY97003.1 Ycf1 [Cucumis melo var. cantalupo...	[more]
ASY96568.1	3.09e-102	100.00	Ycf1 [Cucumis melo subsp. agrestis]	[more]
YP_004841843.1	3.09e-102	100.00	hypothetical chloroplast RF19 [Cucumis melo subsp. melo] >YP_009860133.1 hypothe...	[more]

BLAST of IVF0014089 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01130.1	5.7e-38	51.27	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33163:SF27	PROTEIN TIC 214	coord: 1..155
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014089.1	IVF0014089.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane