IVF0013967 (gene) Melon (IVF77) v1

Overview


Name	IVF0013967
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Location	chr06: 21539716 .. 21544936 (-)
RNA-Seq Expression	IVF0013967
Synteny	IVF0013967

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTCCTTTTATCTTAAATTCTGTATTTATCCCAATTTTTGTACAAAATAAACATCTTATTCATATTGTCCGACCTTCTATACAAAATTCGATTCCGACTATTTAATTCAGAGGACAAGAAGGAAGAAAAATCGAGGGATCTTCAAATTCAAAGCTTAAACTGAGAGAGAACACGATCTTAAGGCAGGTCTATAATAGGGAGAGGATAATTTTTCTGGAGTGGAAGAGGAGAAGAAATTTTGGGATATGAAGGCTCTGTAATACCCGTTCAAACGGTGGTTGAAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGGTACTTCTTCGTAAAAGAAGAAATCGATGGTATAAGTAAGTAGGTCTAAATCCCCTTTCTTTCCTATTTCTATATTTTCCTTTCTTAGACTGCATTTGATCGGAATGATGTTCTTTCTTTGGGTTGCATTTTGAATTTCTAGATTCTTTTCACTTATTTGTTTTTAAAAATTTATTCTCTTTATTTATTTGTGCATTTCCAGTTCCATTGATCTGTTAATTAAACAGTATTGGAAGTATGTAAGTACACAAGAATTTAGCATCTAACTGATTTTGAACTGTGGAAAGCCAGCAGTTTTCTAAGCCCAATGTTGAGCCTTTGCAATTGAGTTTTAAAATTTTAGGCCATGTGTTGGTAACATTTTTTGGTTTCAGTTTTTGAAAATTATGCCTACAAACACCCCTTCTATGTTAAATTTCTATGTTAAATATCTTGCTTTGTTATTTACTTTTTACCCGCATCTTAAAGTCAAGTCAATTTTTTAATACCAGAAAAGATAGTTTTTAGAAAGTTTGAACCATCATGGTTGGCCTAGTCTCAATAACTAACTTAGAGGTTATGTGGTCACCACCTACCTAATAATTAATTTCTCAGAGTTTTCTTGACACTCAGATGTTGTGAAGTCGGATGGGTTGTCTCATGAAATTAGTTGAGGTGTCTGTGAGTTGGTCCGGACACTCACAAATATAAGAAAAAAATTGTTTTTGTTTTTAAAAATTGGCTAAGAATTCAACTTTTGTACCTAAAGAAATATGCAAGACATTGTAAGAAATTACCTTTTTGCCCAGTTGTACTCTACATTAAGAGGATGATGTTCCTGACAAATGGAGGGTTAGAGCACTCTTGAATTAGAGTGATTCATAGGTAGCTTCCTTTATTGTTTATAGGATGAAACTTCTGTTATTGGACATATACAGCTCACAAAATTTTCACTCTTTGGTTTGCTAGTGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGGTAAGCATTTATGGACCTATGTTTAAAACTTATGAATTAAAAGAAGGGCTTTGTTATTTGAATCATCCGATTATGTCATTTTTAAATCACGGTTTAAGATATAGTACCATTTTTGGGAAAATGGTTATTAACATGAGCTGGGTATGTAGTCTAGGAAGAACCGAATTTGCTGATGGTAGGTTTTTCTGATGATGATTGCTTATATTTTATTGCCGCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGTAACTCATTACCTTCTTCCATGACCAACTGATCTTTGCATCCCACTTGAATGATCAGAAGATTGGTGATTGGTGTGCCACACATGATTTGATATTTATATTGTTAGTTCTTTTGCCATTGTCTTCAGGAAATGATGGAACTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCGTATGTTGACTCTTCAATAAAATTTTGCATCTTTTTACTCGGTTGTTCATGACTGAACATTTTTCTACATCATGTAATTAATTATCTTTGTCAATTTCTCCATATCAAAATTGTGACTTATATACAGGAAGAAAGGTATGAGTTGCATTGTACCTGAAATTGCCAAATAGAAGTCACCCAAACATATTCATATTTGAGAATTAATTCTCTTAAAGCCCCGTTGGTAACTATTTCGTTTTTTGTTTTTGGTTTTTGGAAATTAAGCCTATAAACACTTTTTACCCATGTTCTCAAAGCCCAAGTAAAAATTTGGAAACTAAGAAAGTAGTCTTTAATAGCTTGTTTTTGTTTTTGGAATATGGCTAAGAATGCAACTCTTTTATTTGAAGATTGATACGAACTGTGGTAAGAAATAAAAGAAAATCGGCTTATTTTCAAAAACCAAAATAAGAAAAAAAAAAAAAAAACGAAATGATTACCAAATGAGGCCGTAGGAATTGATGATTGGCTTTATAATCTTACTCAAAACATTCTTACCAAGGTCCTCTTTCCTGCCTCAGTAGATTTTCTTATAGATAGTTTATGCTTCCAATGGGCATTCATATAGCTTCACCTTTTTTCTGTAACCATCTTTTTGCGACTTTTTATGAGGTGTAAAAGCAATTATCATTTGATTTTGCATTTCAGAATTAAATTTATTTGATACTTTTAGAAGAACCAATATCATTCTCGTTCTTTGACTTAACATGGTCTAATTGGAAGTTATCTGTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTGGTCAGTTGCTTATTGACAAAAACTTAAGTGCTTGTTACACTTGTAGCATATAGCTAATATTCATTTGCTGCATAGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTATCATTTTATTTCATTATGTATTTTTTAGCCCTTTAATCTCCTCCCCACTTCTCACCAAGAGAAAAGAAATGTCTTTTCATTCAATCCTTAAATAGGATTTTTTTTTAAGAGCCATTAAGATCAATGTTTTAAAAGGCTTTTGATATCAATGTTTTAAGAGGGTATTGAGGTTTATGCCTCAGTGAGGCTCGTCCTATGCAAGACTCTAACTTTTAACCTTGAGACTTGTGCTTCTAAAAATGCACCGAGTGACAAAGGTTTAACGATTTGAAAAATAATATTAATTTGCCGCATTCTTCAAATACATAAAAGGTTTGATTTGTGATAATTTGAGCTATTACTATTACAATTACTACAAAAAAAATATATCATTGATATAATGGAAAGAAAATTAATGTTCAAGGGTTACAAACTCTCGAGTCTTGAAGGAAGTGAAAGTAAAACAAAATCAGGAACTTTGAAACAATTACAATCCTCTTCCTAATGCACACTATTTTGAGCTATTACTAATTTCATATCGTTGCTTTAAGAGCGTACAAACATAAAATTATAGTATAAGTCAACCATATAATAATAGTAGTGACATTGATGTTAAAGATAAGCTATGGCACTTGACAATGGTGATTATGTACAGACACACTTTATGATTATGATGTTCAGTAATACCTAGTTAGTACAATTTAAGGATTTGTAAAATATTTCATCAAATTTAAGGCTTGCACCCCACCTAGAAGAAAAGCCTCAAGATTGCATTTAGCCTTTTTCCCAATTGGAAATAAAACATTTGATTTTAAATAATCATTTGGAATGATCTAAGTATTTTTCTCTTGTTGGCTGATTAATTCCATGTACGTCTTCCGGTCATGTGTAACTCTCTCCCAAATTTGATAGTTCATTCCATTTGGATTCGAGTATATTATACCGATTAGATGCTTACACTCATTTCATTCATTTTGGTATTTCTTGTTCAAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGAGATACCCTGAGGTGGGCCATTCGTTTTAAATTTTATACTGCTATTTTCTTTTATTGGTGAGGTGACATAAATATTGGTTTTTTCTCAATGTTATGGGCATTCCATGGGCAGAAATATTTAAATGTACTTTTCTAGGAGTTTGAGTTAATAGTTTGAATGCTTCGAAGGACCGAGACTTTACAGCAAGTCTATATTGCTGAATGACATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAATTAATAGTATTATCATTATATCATTTGTTTGCTGTTAAAAACATATGAAAGTTTCTGCGAAATGTGCTTATGCTTAAAGAACTATTCCTCTTCTCTTGTAAAGTGGATTTACCTTTGCTTCACCACCAGGAACTCAAACGAAAAGGAGCCAGTTCAAGAGAAACCAATTCCGGAGTACTTTTTTTTTTTTTTTTGCCATCTTACGTGTTTGTTTAGGGCCTTGACTCAACTCAATAGTCATAAATGTCAATATTAGATTGCATAGGATTCACGTTGACATTAGATACAAGGGATTGTGAAGGTTGGCATATCTTTTACCTTTTCTGAAAAAAAGAAAACAACAAAGTGCCTATTGAATACCAAAAAGTTCCCATTCTTTCATATTCAGGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAGACCCGGAACATGGCAGCCACCAACATGAATGATGATTGCCCATCAAGGAGAACTCGCCAACACTAAAGCTAGCAGTTCGTTCTATGTCCAACAATTCAGTAAGCTTCTGCGTTCCGATTACTTACCTCCAAATTTTCCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCAAAAGTCTCAAACAAGATTGTCACTCTGCATTGCCTTGGTTATTTGTCTGATGAAAAGCAGTTATAACTTAAATTTTATATAGTAAGTTTAATAAGCATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTAGCAATTGTCCGTAGTGGCATTGCCTTGGAAAATTCACTGTGGGATTGATATTATTCCTGTTGGTTATGATTTGATTTGTAAAACTTTTTATCCCATATTATTGGAACTCATTGTAATGTTTTCAGGCTCATCTTGAGGGATAAATAATCATGATGCATGCGATATTTTGTTGTGTGCTCTTGCTACTAAATTTGTGGGGGGTGTAAGGATAGAAGGTGAAGCCTGAGAACATGATGTTAGGGCGTAGGAATAGGATTCATATGTTAGTGTTTGGATCTTTGAGGATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAAATATTATATTTTTGTCCTAAATTGATTAATTGTATAAAGTCTTTTTTCCCTTTATGATAGGATTGGGG

mRNA sequence

CTTTTTCCTTTTATCTTAAATTCTGTATTTATCCCAATTTTTGTACAAAATAAACATCTTATTCATATTGTCCGACCTTCTATACAAAATTCGATTCCGACTATTTAATTCAGAGGACAAGAAGGAAGAAAAATCGAGGGATCTTCAAATTCAAAGCTTAAACTGAGAGAGAACACGATCTTAAGGCAGGTCTATAATAGGGAGAGGATAATTTTTCTGGAGTGGAAGAGGAGAAGAAATTTTGGGATATGAAGGCTCTGTAATACCCGTTCAAACGGTGGTTGAAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGGTACTTCTTCGTAAAAGAAGAAATCGATGGTATAATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGATGGAACTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGAGATACCCTGAGGAACTCAAACGAAAAGGAGCCAGTTCAAGAGAAACCAATTCCGGAGTACTTTTTTTTTTTTTTTTGCCATCTTACGTGTTTGTTTAGGGCCTTGACTCAACTCAATAGTCATAAATGTCAATATTAGATTGCATAGGATTCACGTTGACATTAGATACAAGGGATTGTGAAGGTTGGCATATCTTTTACCTTTTCTGAAAAAAAGAAAACAACAAAGTGCCTATTGAATACCAAAAAGTTCCCATTCTTTCATATTCAGGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAGACCCGGAACATGGCAGCCACCAACATGAATGATGATTGCCCATCAAGGAGAACTCGCCAACACTAAAGCTAGCAGTTCGTTCTATGTCCAACAATTCAGTAAGCTTCTGCGTTCCGATTACTTACCTCCAAATTTTCCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCAAAAGTCTCAAACAAGATTGTCACTCTGCATTGCCTTGGTTATTTGTCTGATGAAAAGCAGTTATAACTTAAATTTTATATAGTAAGTTTAATAAGCATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTAGCAATTGTCCGTAGTGGCATTGCCTTGGAAAATTCACTGTGGGATTGATATTATTCCTGTTGGTTATGATTTGATTTGTAAAACTTTTTATCCCATATTATTGGAACTCATTGTAATGTTTTCAGGCTCATCTTGAGGGATAAATAATCATGATGCATGCGATATTTTGTTGTGTGCTCTTGCTACTAAATTTGTGGGGGGTGTAAGGATAGAAGGTGAAGCCTGAGAACATGATGTTAGGGCGTAGGAATAGGATTCATATGTTAGTGTTTGGATCTTTGAGGATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAAATATTATATTTTTGTCCTAAATTGATTAATTGTATAAAGTCTTTTTTCCCTTTATGATAGGATTGGGG

Coding sequence (CDS)

ATGTCGAAACTTTTTGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGGTACTTCTTCGTAAAAGAAGAAATCGATGGTATAATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGATGGAACTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGAGATACCCTGAGGAACTCAAACGAAAAGGAGCCAGTTCAAGAGAAACCAATTCCGGAGTACTTTTTTTTTTTTTTTTGCCATCTTACGTGTTTGTTTAGGGCCTTGACTCAACTCAATAGTCATAAATGTCAATATTAG

Protein sequence

MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPEYFFFFFCHLTCLFRALTQLNSHKCQY

Homology

[Close]

BLAST of IVF0013967 vs. ExPASy Swiss-Prot
Match: Q54MV7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum OX=44689 GN=ndufa12 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 7.3e-05
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 16 TLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT 73
          TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Sbjct: 33 TLVGVDKVGNRYYENRQEIYG---RHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPS 88

[Close]

BLAST of IVF0013967 vs. ExPASy TrEMBL
Match: A0A5A7SS01 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00330 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 164
           LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 163

[Close]

BLAST of IVF0013967 vs. ExPASy TrEMBL
Match: A0A0A0L526 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_3G077630 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 156/163 (95.71%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 164
           LKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE  QEKPIPE
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPE 163

[Close]

BLAST of IVF0013967 vs. ExPASy TrEMBL
Match: A0A6J1DNE9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica charantia OX=3673 GN=LOC111022834 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.8e-70
Identity = 135/163 (82.82%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMERNS+EG LRK+IS  QV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKVISADQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 164
           L SFIRQ PTGSEGAQD EG   R++ RNS EKE V+EKPIPE
Sbjct: 121 LNSFIRQFPTGSEGAQDEEGSAARNSPRNSKEKEAVKEKPIPE 163

[Close]

BLAST of IVF0013967 vs. ExPASy TrEMBL
Match: A0A6J1JVV8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111487996 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70
Identity = 138/163 (84.66%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLF KIAGFF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFKKIAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER SKE  LRK++ST  V GP+
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKVVST--VAGPN 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 164
           LKSFIRQ PTGSEGAQD EG   +D+LRNS E E  +EKPIPE
Sbjct: 121 LKSFIRQFPTGSEGAQDNEGSAAKDSLRNSEENEAAKEKPIPE 161

[Close]

BLAST of IVF0013967 vs. ExPASy TrEMBL
Match: A0A6J1JSL7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111487996 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69
Identity = 137/163 (84.05%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLF KIAGFF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFKKIAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER SKE  LRK++ST    GP+
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKVVST----GPN 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 164
           LKSFIRQ PTGSEGAQD EG   +D+LRNS E E  +EKPIPE
Sbjct: 121 LKSFIRQFPTGSEGAQDNEGSAAKDSLRNSEENEAAKEKPIPE 159

[Close]

BLAST of IVF0013967 vs. NCBI nr
Match: KAA0033972.1 (NDUFA12 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 325 bits (834), Expect = 1.71e-111
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 163
           LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 163

[Close]

BLAST of IVF0013967 vs. NCBI nr
Match: XP_004152928.1 (uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hypothetical protein Csa_010369 [Cucumis sativus])

HSP 1 Score: 310 bits (795), Expect = 1.50e-105
Identity = 156/163 (95.71%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 163
           LKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE  QEKPIPE
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPE 163

[Close]

BLAST of IVF0013967 vs. NCBI nr
Match: XP_038903174.1 (uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida])

HSP 1 Score: 310 bits (794), Expect = 2.14e-105
Identity = 156/163 (95.71%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 163
           LKSFIRQ PTGSEGAQDVEGL TRD+LRNSNEKE V+EKPIPE
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLRNSNEKEAVKEKPIPE 163

[Close]

BLAST of IVF0013967 vs. NCBI nr
Match: XP_031738721.1 (uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus])

HSP 1 Score: 310 bits (795), Expect = 3.34e-105
Identity = 156/163 (95.71%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE 163
           LKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE  QEKPIPE
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPE 163

[Close]

BLAST of IVF0013967 vs. NCBI nr
Match: XP_038903173.1 (uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida])

HSP 1 Score: 309 bits (792), Expect = 5.50e-105
Identity = 157/169 (92.90%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPEYFFFFF 169
           LKSFIRQ PTGSEGAQDVEGL TRD+LRNSNEKE V+EKPIP+   F F
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLRNSNEKEAVKEKPIPDSHSFTF 169

[Close]

BLAST of IVF0013967 vs. TAIR 10
Match: AT4G26965.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-47
Identity = 96/161 (59.63%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MS+L+ + AG FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWI
Sbjct: 1   MSRLWARFAGLFSSKSFIGVDKTGNKYFSRMEEIDGFVKEKRWVKFRREEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPD
Sbjct: 61  CWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEEEEKKARVGTGRK-ITIGKVDGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLR-NSNEKEPVQEKP 161
           L SF+RQ P  S+G +  E     D  R   +E E V  +P
Sbjct: 121 LTSFVRQFPPDSKGGEPEEASEEADKSRAKEHEPEIVSAEP 160

[Close]

BLAST of IVF0013967 vs. TAIR 10
Match: AT4G26965.2 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 144.4 bits (363), Expect = 9.1e-35
Identity = 77/124 (62.10%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 38  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEE 97
           MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE
Sbjct: 1   MKEKRWVKFRREEDPTSIPVEWICWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEE 60

Query: 98  MERNSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLR-NSNEKEPV 157
            E+ ++ G  RK I+ G+V GPDL SF+RQ P  S+G +  E     D  R   +E E V
Sbjct: 61  EEKKARVGTGRK-ITIGKVDGPDLTSFVRQFPPDSKGGEPEEASEEADKSRAKEHEPEIV 120

Query: 158 QEKP 161
             +P
Sbjct: 121 SAEP 123

The following BLAST results are available for this feature:

BLAST of IVF0013967 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54MV7	7.3e-05	44.07	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium d...	[more]

BLAST of IVF0013967 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SS01	3.9e-86	100.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo va...	[more]
A0A0A0L526	1.3e-81	95.71	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus...	[more]
A0A6J1DNE9	1.8e-70	82.82	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica chara...	[more]
A0A6J1JVV8	3.0e-70	84.66	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim...	[more]
A0A6J1JSL7	1.5e-69	84.05	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim...	[more]

BLAST of IVF0013967 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033972.1	1.71e-111	100.00	NDUFA12 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_004152928.1	1.50e-105	95.71	uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hy...	[more]
XP_038903174.1	2.14e-105	95.71	uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]	[more]
XP_031738721.1	3.34e-105	95.71	uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]	[more]
XP_038903173.1	5.50e-105	92.90	uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0013967 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26965.1	1.6e-47	59.63	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]
AT4G26965.2	9.1e-35	62.10	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..155
None	No IPR available	PANTHER	PTHR12910:SF1	NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12	coord: 1..149
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PFAM	PF05071	NDUFA12	coord: 16..97 e-value: 1.4E-12 score: 48.4
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PANTHER	PTHR12910	NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013967.5	IVF0013967.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respirasome
cellular_component	GO:0016020	membrane