IVF0013920 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTTTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCTAGATCATCGAATCAGTCTGTTTCTCCCTTTCCCCAGACGTCGTCCTCACAATCGGCGTATTTAGTCGATTATCTTCGAGCAATTTTTCCTGATATGGATAAGCAGGTGTGTTTGGATATGTACCTTTTTTCTTTTCCTCTAGAATTGAGGTTAATTTATGCAATGGATGGATGTTATGAATCGAAATATGAACTACTTGTTTTGTTGTATTTTCAAGACATTTCTGATGATAGAATTTTTGCTCTTGTTTATAATTCAAGGGGAAATGTATTTGAATGCTTACTGTTTGCTTTGAAATTGATATTCTAGCTTCTAGAAAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATTAGAAGCTTGAACCAGCTTCATTTAGGATATAATGACAGAAACTTGGGAAGTGCTTCAAACTCCTCTGATGTGGCTTTGGAAGCAAATGTTCAACCTCAATCTCAAGGTTTGTATTCTACGTGAACTGAATCTTGGACTTAATAATTCTATTCTCTATGCTCTGTAATTGATTTATAGGAAATATTTTCAATTTTACGACTGTGGGTGCATGAGAGAAGATTTCAATGTTGGTTCATTTATGAATATTTACTTGTGACATTCTTGACATATTCTGAAGTGGTATACTGTCTTGATAAACTGTTTATTTTACAGACTAATTATTTTTCATAGGAGAAGGGATAGTAGTGATTCATTGTTTGAATTCATAACAAGCTTGGGTGCTTGCTTGCTGGTTAGACTAGTATAACCAAAAGTTAAGAAGTCAAATTTATATTTGGTACATGGATTTGCATCTCAAAACTATGGGTCGTGAGTTTACTAATACCTTAGGTGACTTAACCTCTGAAGCCATGAATACAAATTTATTTAATGAACCTTTTATACTGTGAATGACTGTTGCAAAAACATATTACACAAACCAAGAATCGTTCACGTAGAACCAAGCTTCAACATCAGATTCATTTGCATAAGCCATACACAGATTAAACAAATTTAAGCATTACAATTCAAACCAACAAGTTTCCAGCAAAGCAAAGAAGAGGCTTGTGAGAATTACATCAAAAGCTCCATTTCTTATAATAAAAAGCACAAACAAAGCATCGAGAGGGGTCTTTATCAAAATGACTATTGCTCATCGAGTGCTCTGGTTTGATCGTGGGGCTGCTTGTGTCTGTGCCCTTCCTTTGCTGATCTTTGGTTGTATCTCTCTTGTTTGGTTATCCTGCTTTTGTTTGCTTATCCGGTTGTCCTCCCTAATGGGGTCTTCCCTCTGCACTCTTTGGGCATCTCATTCAATTTCATATCTAAAAGAAAAATCCATTAAGCTTGAACTTAGCGAAACCAAACATCCTGAAATTGTGCATTTTGTTTTTGTTTTACATTTTCAGTGAAGCTAGGATTGTCTCGTTTGTCACAGTTGGCTTTTAATATCATTTTTATTCCTCAAATCTATTTGACCTGGATTATAGTGGTAGTTCCTTTCAAATCTACAACCAACCAGTAGAGAGTGACTGAGGGAAATAAGTGATCTTTTGTTGTCTTTCCTGAATATTCATGACACTAATAGTTTGGGACAGCTAAGCATTTTTAGGTCGTTAGGACATTGATTGGTGAGGAAGTTACTAACTTTAGTCAGCTTTGATTGGCATCAGAGTGCCTAGGATCAACCTTGGTGTTGGTGATGTCATGCGGAGCTCTCTCAAGTCTGATGAGAAGTTTTCAAACCTTGAAAGTTTTTGTTTAAGCTCATTTATAGCAGAGGCAGTTTTTTGTTAATAAAGACATTCCCAATATCATTCATGGTAAATTTTCTTCAGTTTTTTGTTGGTGGAACTTGGAAGTTAGTTTGCTGCCAATCAATTTAGGATATGTTTATTTTTTAGCCTTCTCTACAGAGTGATTTGTCTGTTAGGTTTCGTTGTTTCTAATATTCAGTGGACTGGAGCACCTTTTGTAACTTCCATTTGATGTGGAGTGCACCCCCTTGTCCGCCTACTCCCCTTTGGTGATTATCTTTTCTTTCAGCATAGTGTTTCTTCCCTCCCCGAATTGGGCATTAAGTGAACCCTCATGGTCAATAGTATACTGTAGTACACCCCTTTGTTGATCTTTTATTCCTTTTATGACGAGCAGAAACCTGTTTACTTCCCCCCTTCATATTTGTGCATTTTAGAATAAAATTTTCTTGTTAGAGATACTGACATATTCTCTCAAATGAAGCAGACACACAAGGAGAAGCTGCAATTGCGGAGATGCAACAGCCTCTGAGAATCTTCCCACAAATGGTGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAACATGGATGACGCACGCAGCCGTGCTTCAAGAGTTCTTGAGGTTCTAGAAAAGTCTATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGTCTTGAAACATTTACAATTTCTGCTACTTGTTTGTGTCACCAATATTCTGCCACTACAATTTCCTGGTGGCCTTACTGTGATTCTTATTTCGTTTATCTAATCTAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCCCTTATTCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATCCAGCATGAACGTCAAAAGGAATTTGAAGGCAGGAACCAGGAGTTGCAACATCTCAAGAATTAGTCTCTCAATACCAGGAGCAGTTGAAAACACTTGAGGTTGGTTTCATAAATGCTCTAAGATCTTACTTCATTAGTTATTAAAAGTAAAGGCCACGGTTTTAATATCCTTGGAAACAATTTCTCATTAAAAAAGAAAACCATTATCACAATACTTCATAGTCTGATAACTCTTGCATCTTTTAATGAACTATTAGGTGAATAACTATGCACTTACAGTGCATCTTAAACAAGCTCAACAGAGTAGCTCCATTCCAGGGCGTTTCCACCCTGACGTTTTCTAA ATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTTTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCTAGATCATCGAATCAGTCTGTTTCTCCCTTTCCCCAGACGTCGTCCTCACAATCGGCGTATTTAGTCGATTATCTTCGAGCAATTTTTCCTGATATGGATAAGCAGCTTCTAGAAAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATTAGAAGCTTGAACCAGCTTCATTTAGGATATAATGACAGAAACTTGGGAAGTGCTTCAAACTCCTCTGATGTGGCTTTGGAAGCAAATGTTCAACCTCAATCTCAAGGTTTACACACAAGGAGAAGCTGCAATTGCGGAGATGCAACAGCCTCTGAGAATCTTCCCACAAATGGTGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAACATGGATGACGCACGCAGCCGTGCTTCAAGAGTTCTTGAGGTTCTAGAAAAGTCTATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCCCTTATTCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATCCAGCATGAACGTCAAAAGGAATTTGAAGAATTAGTCTCTCAATACCAGGAGCAGTTGAAAACACTTGAGGTGAATAACTATGCACTTACAGTGCATCTTAAACAAGCTCAACAGAGTAGCTCCATTCCAGGGCGTTTCCACCCTGACGTTTTCTAA ATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTTTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCTAGATCATCGAATCAGTCTGTTTCTCCCTTTCCCCAGACGTCGTCCTCACAATCGGCGTATTTAGTCGATTATCTTCGAGCAATTTTTCCTGATATGGATAAGCAGCTTCTAGAAAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATTAGAAGCTTGAACCAGCTTCATTTAGGATATAATGACAGAAACTTGGGAAGTGCTTCAAACTCCTCTGATGTGGCTTTGGAAGCAAATGTTCAACCTCAATCTCAAGGTTTACACACAAGGAGAAGCTGCAATTGCGGAGATGCAACAGCCTCTGAGAATCTTCCCACAAATGGTGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAACATGGATGACGCACGCAGCCGTGCTTCAAGAGTTCTTGAGGTTCTAGAAAAGTCTATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCCCTTATTCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATCCAGCATGAACGTCAAAAGGAATTTGAAGAATTAGTCTCTCAATACCAGGAGCAGTTGAAAACACTTGAGGTGAATAACTATGCACTTACAGTGCATCTTAAACAAGCTCAACAGAGTAGCTCCATTCCAGGGCGTTTCCACCCTGACGTTTTCTAA MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSVSPFPQTSSSQSAYLVDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNSSDVALEANVQPQSQGLHTRRSCNCGDATASENLPTNGAEWVDLFVNEMTSASNMDDARSRASRVLEVLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEFEELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF Homology
BLAST of IVF0013920 vs. ExPASy TrEMBL
Match: A0A5A7V8M8 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00350 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 2.8e-133 Identity = 261/282 (92.55%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of IVF0013920 vs. ExPASy TrEMBL
Match: A0A1S3C4J9 (uncharacterized protein LOC103496812 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496812 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 2.8e-133 Identity = 261/282 (92.55%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of IVF0013920 vs. ExPASy TrEMBL
Match: A0A5D3BFF3 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00690 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132 Identity = 261/282 (92.55%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of IVF0013920 vs. ExPASy TrEMBL
Match: A0A1S3C471 (uncharacterized protein LOC103496812 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496812 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132 Identity = 261/282 (92.55%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of IVF0013920 vs. ExPASy TrEMBL
Match: A0A0A0LI42 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G007970 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 4.0e-132 Identity = 260/282 (92.20%), Postives = 261/282 (92.55%), Query Frame = 0
BLAST of IVF0013920 vs. NCBI nr
Match: XP_008457037.1 (PREDICTED: uncharacterized protein LOC103496812 isoform X1 [Cucumis melo] >KAA0063530.1 uncharacterized protein E6C27_scaffold329G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 486 bits (1251), Expect = 4.71e-172 Identity = 261/282 (92.55%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of IVF0013920 vs. NCBI nr
Match: XP_008457047.1 (PREDICTED: uncharacterized protein LOC103496812 isoform X2 [Cucumis melo] >TYJ97857.1 uncharacterized protein E5676_scaffold285G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 484 bits (1245), Expect = 3.72e-171 Identity = 261/282 (92.55%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of IVF0013920 vs. NCBI nr
Match: XP_011648696.1 (uncharacterized protein LOC101217268 isoform X1 [Cucumis sativus]) HSP 1 Score: 483 bits (1243), Expect = 7.79e-171 Identity = 260/282 (92.20%), Postives = 261/282 (92.55%), Query Frame = 0
BLAST of IVF0013920 vs. NCBI nr
Match: XP_011648697.1 (uncharacterized protein LOC101217268 isoform X2 [Cucumis sativus] >KGN60704.1 hypothetical protein Csa_019372 [Cucumis sativus]) HSP 1 Score: 482 bits (1240), Expect = 2.15e-170 Identity = 260/282 (92.20%), Postives = 261/282 (92.55%), Query Frame = 0
BLAST of IVF0013920 vs. NCBI nr
Match: XP_038890913.1 (uncharacterized protein LOC120080344 [Benincasa hispida]) HSP 1 Score: 477 bits (1227), Expect = 2.06e-168 Identity = 256/282 (90.78%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of IVF0013920 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein ) HSP 1 Score: 280.4 bits (716), Expect = 1.5e-75 Identity = 166/286 (58.04%), Postives = 203/286 (70.98%), Query Frame = 0
BLAST of IVF0013920 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein ) HSP 1 Score: 277.3 bits (708), Expect = 1.3e-74 Identity = 167/287 (58.19%), Postives = 203/287 (70.73%), Query Frame = 0
BLAST of IVF0013920 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 182.6 bits (462), Expect = 4.3e-46 Identity = 120/285 (42.11%), Postives = 165/285 (57.89%), Query Frame = 0
BLAST of IVF0013920 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). ) HSP 1 Score: 176.0 bits (445), Expect = 4.1e-44 Identity = 121/286 (42.31%), Postives = 168/286 (58.74%), Query Frame = 0
BLAST of IVF0013920 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein ) HSP 1 Score: 174.1 bits (440), Expect = 1.5e-43 Identity = 111/202 (54.95%), Postives = 133/202 (65.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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