IVF0013835 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGACAATGGGACCTTCAGACCCGATTACCTAGTCCAATTGGTAAGAATGATGAGGGAGAAGATGCCAAGATACAATTTGATGTCGACCATTGTTACCGAAAGTAGGATTAAGTTATTGAAAAGAACGGTTTAGGTCATTATAGAAATACATGGATCGACGTGCAGTGGCTTCGACTGGAATGACGAGCTTAAGTGCATCATTGCAGAGAAGGACGTCTTCGACAGTTGAGTTAGTATAAAAAGCTAGATGAATGCGAATTTTTTACATCATTATAATCAAATACTGACGACTGTTTTTTTTTCACTATTTGTACAGACGCGTCCTGCAGCCAACGACCTACTAAACAAGCCTTTTCCGCTTTATGACGAGCTATTGTATGTCTTTAGTAAAGATCGTGCGACGGGGGCCCATGCAGAGACATTCGTTGATATCAGGTCCAATGTGCCAGGGGGAAGCAAAGGAGTTCAACAAGAAGATGGGCTAGATATGGAGTTCCCTACTATGTACAACCCAGGAATGAACATGTCGCCTGAAGACATGATGGGCGCACGACTTGGTAAGTCCATCGACTGTAGGTCGGTTCTAGTAGATTGA ATGTCAGACAATGGGACCTTCAGACCCGATTACCTAGTCCAATTGACGCGTCCTGCAGCCAACGACCTACTAAACAAGCCTTTTCCGCTTTATGACGAGCTATTGTATGTCTTTAGTAAAGATCGTGCGACGGGGGCCCATGCAGAGACATTCGTTGATATCAGGTCCAATGTGCCAGGGGGAAGCAAAGGAGTTCAACAAGAAGATGGGCTAGATATGGAGTTCCCTACTATGTACAACCCAGGAATGAACATGTCGCCTGAAGACATGATGGGCGCACGACTTGGTAAGTCCATCGACTGTAGGTCGGTTCTAGTAGATTGA ATGTCAGACAATGGGACCTTCAGACCCGATTACCTAGTCCAATTGACGCGTCCTGCAGCCAACGACCTACTAAACAAGCCTTTTCCGCTTTATGACGAGCTATTGTATGTCTTTAGTAAAGATCGTGCGACGGGGGCCCATGCAGAGACATTCGTTGATATCAGGTCCAATGTGCCAGGGGGAAGCAAAGGAGTTCAACAAGAAGATGGGCTAGATATGGAGTTCCCTACTATGTACAACCCAGGAATGAACATGTCGCCTGAAGACATGATGGGCGCACGACTTGGTAAGTCCATCGACTGTAGGTCGGTTCTAGTAGATTGA MSDNGTFRPDYLVQLTRPAANDLLNKPFPLYDELLYVFSKDRATGAHAETFVDIRSNVPGGSKGVQQEDGLDMEFPTMYNPGMNMSPEDMMGARLGKSIDCRSVLVD Homology
BLAST of IVF0013835 vs. ExPASy TrEMBL
Match: A0A5D3C0W3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002730 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 8.8e-43 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of IVF0013835 vs. ExPASy TrEMBL
Match: A0A5A7V3X7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003100 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38 Identity = 79/81 (97.53%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of IVF0013835 vs. ExPASy TrEMBL
Match: A0A5A7V2R5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold160G00370 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24 Identity = 65/96 (67.71%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of IVF0013835 vs. ExPASy TrEMBL
Match: A0A5A7TYU4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002690 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 8.6e-22 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of IVF0013835 vs. ExPASy TrEMBL
Match: A0A5D3DLC6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002060 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20 Identity = 53/88 (60.23%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of IVF0013835 vs. NCBI nr
Match: TYK05020.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 182 bits (461), Expect = 3.20e-56 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of IVF0013835 vs. NCBI nr
Match: KAA0062004.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 168 bits (426), Expect = 6.54e-51 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of IVF0013835 vs. NCBI nr
Match: KAA0060069.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 121 bits (303), Expect = 2.07e-31 Identity = 65/96 (67.71%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of IVF0013835 vs. NCBI nr
Match: KAA0048148.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK08106.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 1.43e-28 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of IVF0013835 vs. NCBI nr
Match: KAA0055070.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24415.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 108 bits (269), Expect = 9.23e-27 Identity = 53/88 (60.23%), Postives = 60/88 (68.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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