IVF0013811 (gene) Melon (IVF77) v1

Overview


Name	IVF0013811
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	U-box domain-containing protein 4
Location	chr10: 16109890 .. 16110205 (+)
RNA-Seq Expression	IVF0013811
Synteny	IVF0013811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGGCATTCCACCACTGGTATCTTTACTACTGAATGGATCAAATAGAAGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTTGATCAAACCAAATAACGAGCAGGCCATCACTGCTCGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCGGAGCAAGGTACGAGTTTAGCAGAGAAGGCGATGGTGGTTTTGAGTAACCTGGCTGGGATTCAAGAGGGAAAGGATACGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAG

mRNA sequence

ATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGGCATTCCACCACTGGTATCTTTACTACTGAATGGATCAAATAGAAGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTTGATCAAACCAAATAACGAGCAGGCCATCACTGCTCGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCGGAGCAAGGTACGATAACCTGGCTGGGATTCAAGAGGGAAAGGATACGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAG

Coding sequence (CDS)

ATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGGCATTCCACCACTGGTATCTTTACTACTGAATGGATCAAATAGAAGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTTGATCAAACCAAATAACGAGCAGGCCATCACTGCTCGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCGGAGCAAGGTACGATAACCTGGCTGGGATTCAAGAGGGAAAGGATACGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAG

Protein sequence

MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTITWLGFKRERIRLWKRVELLRL

Homology

[Close]

BLAST of IVF0013811 vs. ExPASy Swiss-Prot
Match: Q9ZV31 (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-11
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 2   SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVK 61
           SL++++ENK +IG  G IPPLV+LL  GS R KKDA T L+ LC+ + N  +A+ A  V 
Sbjct: 466 SLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVP 525

Query: 62  PLVALVAE 70
            L+ L+ E
Sbjct: 526 VLMRLLTE 533

[Close]

BLAST of IVF0013811 vs. ExPASy Swiss-Prot
Match: Q681N2 (U-box domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=PUB15 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 7.6e-11
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 2   SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVK 61
           SL++L+ENK +IG+  GIPPLV LL +G+ R KKDALT L+ L L   N  +AI A  V+
Sbjct: 488 SLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQ 547

Query: 62  PLVALVAEQ 71
           PL+ L+ ++
Sbjct: 548 PLLNLLKDK 556

[Close]

BLAST of IVF0013811 vs. ExPASy Swiss-Prot
Match: Q9SNC6 (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 9.9e-11
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 2   SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVK 61
           SL++++ENK +IG  G IPPLV LL  G+ R KKDA T L+ LC+ + N  +AI A  + 
Sbjct: 461 SLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIP 520

Query: 62  PLVALVAEQGT 73
            L  L+ E G+
Sbjct: 521 TLTRLLTEPGS 531

[Close]

BLAST of IVF0013811 vs. ExPASy Swiss-Prot
Match: Q8VZ40 (U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-09
Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 2   SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVK 61
           SL++++ENK +IG  G I  L+SLL  G+ R KKDA T ++ LC+ + N  +A+    V 
Sbjct: 454 SLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVD 513

Query: 62  PLVALVAEQG 72
           PL  L+ + G
Sbjct: 514 PLTRLLKDAG 523

[Close]

BLAST of IVF0013811 vs. ExPASy Swiss-Prot
Match: Q9C9A6 (U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-09
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 2   SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVK 61
           SL+L +ENK  IG  G I  LV LL  GS R KKDA T L+ LC+ + N  +A+ A  VK
Sbjct: 451 SLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVK 510

Query: 62  PLVALVAEQGT 73
           PLV ++ +  +
Sbjct: 511 PLVKMLTDSSS 521

[Close]

BLAST of IVF0013811 vs. ExPASy TrEMBL
Match: A0A5D3D6A7 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00240 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV
Sbjct: 501 MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 560

Query: 61  KPLVALVAEQGT 73
           KPLVALVAEQGT
Sbjct: 561 KPLVALVAEQGT 572

[Close]

BLAST of IVF0013811 vs. ExPASy TrEMBL
Match: A0A5D3CRG4 (U-box domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005940 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.0e-26
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AV
Sbjct: 280 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAV 339

Query: 61  KPLVALVAEQGT 73
           KPLVALVAEQGT
Sbjct: 340 KPLVALVAEQGT 351

[Close]

BLAST of IVF0013811 vs. ExPASy TrEMBL
Match: A0A0A0KL34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511670 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.0e-26
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AV
Sbjct: 280 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAV 339

Query: 61  KPLVALVAEQGT 73
           KPLVALVAEQGT
Sbjct: 340 KPLVALVAEQGT 351

[Close]

BLAST of IVF0013811 vs. ExPASy TrEMBL
Match: A0A1S3B089 (U-box domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103484662 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.0e-26
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AV
Sbjct: 280 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAV 339

Query: 61  KPLVALVAEQGT 73
           KPLVALVAEQGT
Sbjct: 340 KPLVALVAEQGT 351

[Close]

BLAST of IVF0013811 vs. ExPASy TrEMBL
Match: A0A6J1KQR1 (U-box domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111496781 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.6e-26
Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+ +TA AV
Sbjct: 280 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERTVTAGAV 339

Query: 61  KPLVALVAEQGT 73
           KPLVALVAEQGT
Sbjct: 340 KPLVALVAEQGT 351

[Close]

BLAST of IVF0013811 vs. NCBI nr
Match: KAA0035911.1 (gag-protease polyprotein [Cucumis melo var. makuwa] >TYK19065.1 gag-protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 143 bits (360), Expect = 1.65e-37
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV
Sbjct: 501 MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 560

Query: 61  KPLVALVAEQGT 72
           KPLVALVAEQGT
Sbjct: 561 KPLVALVAEQGT 572

[Close]

BLAST of IVF0013811 vs. NCBI nr
Match: XP_038881710.1 (U-box domain-containing protein 4 [Benincasa hispida])

HSP 1 Score: 129 bits (323), Expect = 6.28e-33
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AV
Sbjct: 280 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAV 339

Query: 61  KPLVALVAEQGT 72
           KPLVALVAEQGT
Sbjct: 340 KPLVALVAEQGT 351

[Close]

BLAST of IVF0013811 vs. NCBI nr
Match: XP_008440076.1 (PREDICTED: U-box domain-containing protein 4 [Cucumis melo] >TYK12996.1 U-box domain-containing protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (323), Expect = 6.28e-33
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AV
Sbjct: 280 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAV 339

Query: 61  KPLVALVAEQGT 72
           KPLVALVAEQGT
Sbjct: 340 KPLVALVAEQGT 351

[Close]

BLAST of IVF0013811 vs. NCBI nr
Match: XP_004134799.1 (U-box domain-containing protein 4 [Cucumis sativus] >KGN49052.1 hypothetical protein Csa_003608 [Cucumis sativus])

HSP 1 Score: 129 bits (323), Expect = 6.28e-33
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AV
Sbjct: 280 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAV 339

Query: 61  KPLVALVAEQGT 72
           KPLVALVAEQGT
Sbjct: 340 KPLVALVAEQGT 351

[Close]

BLAST of IVF0013811 vs. NCBI nr
Match: XP_023518630.1 (U-box domain-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127 bits (319), Expect = 2.37e-32
Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+ +TA AV
Sbjct: 280 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERTVTAGAV 339

Query: 61  KPLVALVAEQGT 72
           KPLVALVAEQGT
Sbjct: 340 KPLVALVAEQGT 351

[Close]

BLAST of IVF0013811 vs. TAIR 10
Match: AT4G16490.1 (ARM repeat superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 9.4e-25
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           +SLALLEENK SIG CG IPPLVSLLLNGS R KKDALTTLYKLC ++ N E+A+TA AV
Sbjct: 291 LSLALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAV 350

Query: 61  KPLVALVAEQGT 73
           KPLV LVAE+GT
Sbjct: 351 KPLVDLVAEEGT 362

[Close]

BLAST of IVF0013811 vs. TAIR 10
Match: AT2G28830.1 (PLANT U-BOX 12 )

HSP 1 Score: 68.2 bits (165), Expect = 4.1e-12
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 2   SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVK 61
           SL++++ENK +IG  G IPPLV+LL  GS R KKDA T L+ LC+ + N  +A+ A  V 
Sbjct: 466 SLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVP 525

Query: 62  PLVALVAE 70
            L+ L+ E
Sbjct: 526 VLMRLLTE 533

[Close]

BLAST of IVF0013811 vs. TAIR 10
Match: AT5G42340.1 (Plant U-Box 15 )

HSP 1 Score: 67.8 bits (164), Expect = 5.4e-12
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 2   SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVK 61
           SL++L+ENK +IG+  GIPPLV LL +G+ R KKDALT L+ L L   N  +AI A  V+
Sbjct: 488 SLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQ 547

Query: 62  PLVALVAEQ 71
           PL+ L+ ++
Sbjct: 548 PLLNLLKDK 556

[Close]

BLAST of IVF0013811 vs. TAIR 10
Match: AT3G46510.1 (plant U-box 13 )

HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 2   SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVK 61
           SL++++ENK +IG  G IPPLV LL  G+ R KKDA T L+ LC+ + N  +AI A  + 
Sbjct: 461 SLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIP 520

Query: 62  PLVALVAEQGT 73
            L  L+ E G+
Sbjct: 521 TLTRLLTEPGS 531

[Close]

BLAST of IVF0013811 vs. TAIR 10
Match: AT3G01400.1 (ARM repeat superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 1   MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAV 60
           + L+ +EENK +IG  G IP LV+LL  G  R KKDA T LY LC  K N  +A+ +  +
Sbjct: 171 LRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIM 230

Query: 61  KPLVALVAEQGT 73
           KPLV L+A+ G+
Sbjct: 231 KPLVELMADFGS 242

The following BLAST results are available for this feature:

BLAST of IVF0013811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZV31	5.8e-11	48.53	U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2...	[more]
Q681N2	7.6e-11	50.72	U-box domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=PUB15 PE=2...	[more]
Q9SNC6	9.9e-11	46.48	U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1...	[more]
Q8VZ40	2.4e-09	41.43	U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1...	[more]
Q9C9A6	3.2e-09	46.48	U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2...	[more]

BLAST of IVF0013811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D6A7	1.5e-30	100.00	Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5D3CRG4	3.0e-26	90.28	U-box domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0KL34	3.0e-26	90.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511670 PE=4 SV=1	[more]
A0A1S3B089	3.0e-26	90.28	U-box domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103484662 PE=4 S...	[more]
A0A6J1KQR1	8.6e-26	88.89	U-box domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC1114967...	[more]

BLAST of IVF0013811 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035911.1	1.65e-37	100.00	gag-protease polyprotein [Cucumis melo var. makuwa] >TYK19065.1 gag-protease pol...	[more]
XP_038881710.1	6.28e-33	90.28	U-box domain-containing protein 4 [Benincasa hispida]	[more]
XP_008440076.1	6.28e-33	90.28	PREDICTED: U-box domain-containing protein 4 [Cucumis melo] >TYK12996.1 U-box do...	[more]
XP_004134799.1	6.28e-33	90.28	U-box domain-containing protein 4 [Cucumis sativus] >KGN49052.1 hypothetical pro...	[more]
XP_023518630.1	2.37e-32	88.89	U-box domain-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0013811 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16490.1	9.4e-25	77.78	ARM repeat superfamily protein	[more]
AT2G28830.1	4.1e-12	48.53	PLANT U-BOX 12	[more]
AT5G42340.1	5.4e-12	50.72	Plant U-Box 15	[more]
AT3G46510.1	7.0e-12	46.48	plant U-box 13	[more]
AT3G01400.1	1.6e-11	48.61	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 8..45 e-value: 3.2E-5 score: 23.8
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..77 e-value: 3.0E-10 score: 41.3
None	No IPR available	PANTHER	PTHR23315	U BOX DOMAIN-CONTAINING	coord: 1..72
None	No IPR available	PANTHER	PTHR23315:SF304	U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE	coord: 1..72
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 6..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013811.2	IVF0013811.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding