IVF0013752 (gene) Melon (IVF77) v1

Overview


Name	IVF0013752
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Phosphorylated adapter RNA export protein
Location	chr11: 30622941 .. 30626900 (-)
RNA-Seq Expression	IVF0013752
Synteny	IVF0013752

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACCCTAAACAGTATTTCCTCTTCATCCTGGCTGCATCGGCTGCATCAGCTGCATCAGTACTGATCAAAACACCATCTTTTCGTTTCTCCCCTTTTCCTTCCTCTTCAATCTTCATATCTCCTTCCAACCCACGATCCCACGCCCTCTCCCCCGTACTCTCATCCCATTTCCACCGCTCTCTCGCTTAAGATTTCGCGTTAAAGCTTCACCGCCATTCCATTGATTCCTTCTCCATTTTCTGGGTAAGTTTTATGATCGCATTTGAGGTTTCCTCTTCTTTTAACTGTGTTCTTATATCTGCTGCTCTCACTCTTCAAGTTCAACTGATTACTGGGAGGCTGTTGACTACACTTTTTGTACTTGTTTTGAAGCTATGATTGTTAAGGATATGGATTGTTTTAGTTTATTTATGCTCAAATTTGTCGTTTCCGTATTGAACTAATGCCATTTTTTTGAGCTATAATTTTCTGCCAATAAAGGGTGCATTCCTTCGATGGAAATTTCCTAAGACTTTTAGAGTTGAGAGCCAAATTCTTCTTTTCCAAGCTTTCTGTATCAAAACGGGAGCCACCATTTTTTGCAGCTTACTATCAAGAGAAGGTCCTTAAGATTGTCTATGGTGTTGGAAACTAAATCTTTCATCTTTCTATGAGCTTAATAAGAGAAACTCTTGATCTCTTCTAGGCCTTGAGGTGGGCGCTTACTTTTGGAGAAAAGAGAGGGAAAAAAAATGTGTTAACAAATTTTGACATTTTATTGTTGAGTAATTTTTATATCAGTGAGCGCCCAAAAGCTATGCGAGTGTTGATTTCATTTCCGTCTTGCTATCCTGATAATTTCAAGTTGCAGTTTATATATGTTCCCTGATACTTTCTCTTGGATGTTTGATTATTTTATGAAATCTTTTGTTTCTCTGAATAAAGAGTGTCTGATTATTTTATATAGTCGAGGTATCTTATGGATGGACATGAGAACATACTTGAGGCCATATATGAAGCCGATGAGTTTGAAAATGATGATGTTGAAATGGCCGATGTGGAAGAAGGAGAGTTCATTGACGCCAATATCAATATAGAGAAAAGCAGTTTTACAGATGTTCAAGCACCAAGTACAGATCAGAGAAGTAAAAATCGTAAACGTCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTACGTGGAATCTTCTGATCATGTTGTTTATGCAATTGCATGGAAAAAGAAGCAATATTGCAAGCTTTCTCGAGATGCGTTTTTTGTTTGGAAATCCATTTTAGTTTTGTCGAGTAAATGTAGATTTAATAGAAGGAGTTTTTACTCTGGTCGCTATGTTATTATGCTGATTTCTGTGTTCTCTCAGGTTTGTGTTGGATGCGTGCAGACGTTTGAAAGAGAAAAAGTCATACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCCGCATTAAGCGAACTTATCAAAGAGGTATTATGATTTTCTTGTAACCTGATAAAACAATATTTTGTTTGATTGAGTGATAAAAAATTCTGACCTATCCATTAGTATTATTTTGAAAACTTCCCTTCTGTTTTTTAAAGTTCTATTTGAAAGTGAATTGAATTGACCAGCCATTAACTAACCAAACCAACATAATTGAGTTTCATCTGTTTTCCCTTTTGGTTTACATTCAGCCCCCTAATGAGTAGAACCCACGAAATATTTTGGAAATTGTTCTTTCTGTTGGGAAACCCTAGCCGGCCGTTTTCTTTTCTTCTTCTTTATCTATCATCTTCTTAATCCAAATCGATGTATCCGAAAACCATCTACTCTCTCTCTTCTTTAATCTTGTTCTGAGCTTGTTCTTGATCTTGATTCTATTCCTTATTCCGACGAGTGCACGTCGAAATAGGGAAGGCTGTGTTAACCCTGGGGAAAAACTGGCATCTTGATTGACACCATGGTCGTGCCGAAATTGCTTTCAAGGCAGTGGTTTGTCATAGCATAACAATTCCTTTTGACATCTTATTAACAACAATTCACTTCAGACTCCAGTACGTATCATACCACACAGCCACTCTTCATATTTAATCAGTATTATTTCCTACCCTTGCAGATTCTGTTGCTGAAGTCACTTTGCTCCTTTTAACCTTGTTCTGAGCTGTGAACCACCATTGCTGGACTACTACATCTGTGCTATATAAGTTGATGTTATTATCCCAGGATATATTGGTTACAATCTCTGTAAGATCTTTGTACTTTATTACAAAAAAACCTTTAGTATTGATCGCAATTTACAATCCATCTTTTCCACCCACTTCCCTGAAAATACTACTCCACCTGATTATTTTCACTGAATCTGGACTTCGTCAAAATGCTCTTGGAAGTTTTAACATGTACTTTTAACTGGAATACCCAAACTAAATTTGCAGCTCAGTTGTGCATGTCCTATCATACTTCTCATCTTGAGGTTTGAGATTTGCTTTCAATTGAGCTCTTGAAAATCTGTTAACTTTTAAAAAAATTTGTAACCGTTTATCAAATTCTTTTATGCAGAAGCCCTAGCCTTGCTTTGCCCCTTTGAGTTACTGATGATGCTTAACTAGAGATAGGCTGCATACTTAATCAATGGTCGATTTTGCTTGTAATTGTTTTGGCGTTTTTCTTCTTTTACAATACAACACCGTATGATCTGCACAAGTTGACATGTCGGAATACCAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACCGCAGATGGCAGGCGCTTTCGGACAGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATAATGAAACGAGCAAAAGAGTTTGAGGTAATTAACAAGACCCTCGTGACATACTTTATAACTCGAAAAACCTTTACATGTTTGTTCCTTTATTCTTATCAAATGTACGTGCTCTTCTTATGTAAGCCACATAAAAAAAATATTATCAATATTACTGGAGGACACTTCTAAAATTTTTCATTGTGAAGACAAACTTTTTCATCTTTTCAAATCTTTGATCTTATTCAGAGTGGCCTCAGTTTCCTAAGCCTGTTGCTAACACTTCAAATTGCTGAGCTTATTCACTTTCTGTTTTCTTCGTTTTTTTCTTTTAGATTTTAATTGTATGTTGAAGAATGCGTACATGTACTTTTGAAGTATTGTGAACTTCTTCGGCTCACGGTATAAGAAGTTAGGCTTAGGCATAAGATTGTTGTTTTCTAGTCATGGGACGCTCAAACTCCTTTGGCCAACCTAGGTTTAGAGTTCACAACCCCATTTTCCCAACTCCTTGCGGCAAGCACCCCTTCTGATGTTAGAAATTAGAATAGAAAATACGTTGAAGTGAAGTTCTGTATGATCCTATCATGAAGTTGTTCCTTTATTAGTTAATTCGTATTATACATATTTTTGTTTTCTTCATGATGGTGCAGAAACAATTTAAGCAACCAAATATTAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAGGTTCCTCACCTTTTCTCTGAAGGGGGGTCTTCTAGAAATCTGCCAGACCACGTCCAAAGCTTTACTTCAGAGCTGAATCGATCTAAAGAATCAAATTCCGAAGAAAAACGGTCTTCTATTCACGATAGATTAAGAGTACCAATTTCATATGACGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTCGACTGTAGATAGATTTTCCCATATTTTTGAACAATTACTGTTGGTTTTTAGTTCGTGTCTAACTAAATCAACAGTTTTTTACCTCCAAAAAATGAGGCTGAGGCAGAAGAATGTTCTATAAGCTGAGTTTGTTCCTTTTAATTTCAGTTATTTTTTGTTTTAGGCTGCTTTGGTTGAGTGTCTGCTTGTTCGGGTGAGGATGGAATTAGC

mRNA sequence

AAAAACCCTAAACAGTATTTCCTCTTCATCCTGGCTGCATCGGCTGCATCAGCTGCATCAGTACTGATCAAAACACCATCTTTTCGTTTCTCCCCTTTTCCTTCCTCTTCAATCTTCATATCTCCTTCCAACCCACGATCCCACGCCCTCTCCCCCGTACTCTCATCCCATTTCCACCGCTCTCTCGCTTAAGATTTCGCGTTAAAGCTTCACCGCCATTCCATTGATTCCTTCTCCATTTTCTGGTCGAGGTATCTTATGGATGGACATGAGAACATACTTGAGGCCATATATGAAGCCGATGAGTTTGAAAATGATGATGTTGAAATGGCCGATGTGGAAGAAGGAGAGTTCATTGACGCCAATATCAATATAGAGAAAAGCAGTTTTACAGATGTTCAAGCACCAAGTACAGATCAGAGAAGTAAAAATCGTAAACGTCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTTGTGTTGGATGCGTGCAGACGTTTGAAAGAGAAAAAGTCATACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCCGCATTAAGCGAACTTATCAAAGAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACCGCAGATGGCAGGCGCTTTCGGACAGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATAATGAAACGAGCAAAAGAGTTTGAGAAACAATTTAAGCAACCAAATATTAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAGGTTCCTCACCTTTTCTCTGAAGGGGGGTCTTCTAGAAATCTGCCAGACCACGTCCAAAGCTTTACTTCAGAGCTGAATCGATCTAAAGAATCAAATTCCGAAGAAAAACGGTCTTCTATTCACGATAGATTAAGAGTACCAATTTCATATGACGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTCGACTGTAGATAGATTTTCCCATATTTTTGAACAATTACTGTTGGTTTTTAGTTCGTGTCTAACTAAATCAACAGTTTTTTACCTCCAAAAAATGAGGCTGAGGCAGAAGAATGTTCTATAAGCTGAGTTTGTTCCTTTTAATTTCAGTTATTTTTTGTTTTAGGCTGCTTTGGTTGAGTGTCTGCTTGTTCGGGTGAGGATGGAATTAGC

Coding sequence (CDS)

ATGGATGGACATGAGAACATACTTGAGGCCATATATGAAGCCGATGAGTTTGAAAATGATGATGTTGAAATGGCCGATGTGGAAGAAGGAGAGTTCATTGACGCCAATATCAATATAGAGAAAAGCAGTTTTACAGATGTTCAAGCACCAAGTACAGATCAGAGAAGTAAAAATCGTAAACGTCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTTGTGTTGGATGCGTGCAGACGTTTGAAAGAGAAAAAGTCATACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCCGCATTAAGCGAACTTATCAAAGAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACCGCAGATGGCAGGCGCTTTCGGACAGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATAATGAAACGAGCAAAAGAGTTTGAGAAACAATTTAAGCAACCAAATATTAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAGGTTCCTCACCTTTTCTCTGAAGGGGGGTCTTCTAGAAATCTGCCAGACCACGTCCAAAGCTTTACTTCAGAGCTGAATCGATCTAAAGAATCAAATTCCGAAGAAAAACGGTCTTCTATTCACGATAGATTAAGAGTACCAATTTCATATGACGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTCGACTGTAG

Protein sequence

MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRKRRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREATETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYDDDLLQENPKEEDTTRL

Homology

[Close]

BLAST of IVF0013752 vs. ExPASy TrEMBL
Match: A0A5D3DLH5 (Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00350 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 6.9e-134
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 241 DDLLQENPKEEDTTRL 257
           DDLLQENPKEEDTTRL
Sbjct: 241 DDLLQENPKEEDTTRL 256

[Close]

BLAST of IVF0013752 vs. ExPASy TrEMBL
Match: A0A1S3CD38 (Phosphorylated adapter RNA export protein OS=Cucumis melo OX=3656 GN=LOC103499036 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.9e-131
Identity = 253/256 (98.83%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREA 
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAR 180

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 241 DDLLQENPKEEDTTRL 257
           DDLLQENPKEEDTT L
Sbjct: 241 DDLLQENPKEEDTTLL 256

[Close]

BLAST of IVF0013752 vs. ExPASy TrEMBL
Match: A0A0A0KBJ7 (Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G076770 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.2e-123
Identity = 240/254 (94.49%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREAT
Sbjct: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           ETEKESSQKVPHLFSE GSSRNLPDHVQSF+SELN+SKESNSEEK SSIHDRLRVP+SYD
Sbjct: 184 ETEKESSQKVPHLFSE-GSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYD 243

Query: 241 DDLLQENPKEEDTT 255
           DDLLQENPKEEDTT
Sbjct: 244 DDLLQENPKEEDTT 256

[Close]

BLAST of IVF0013752 vs. ExPASy TrEMBL
Match: A0A6J1H592 (Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC111460255 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.5e-109
Identity = 214/254 (84.25%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYE D+ ENDDVEM DVEEGEF++ NI+ EKSS TDVQAPS D +SKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNISTEKSSLTDVQAPSIDHKSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           RR+KKKKNKRK+ E GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           E  K SSQ V HLFSE G+S++ PD +QS T E N+SKESNSEEKRSS+H+RLRVP+SYD
Sbjct: 181 EIGKASSQDVLHLFSE-GASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVSYD 240

Query: 241 DDLLQENPKEEDTT 255
           DD+L+ENPKEEDT+
Sbjct: 241 DDILRENPKEEDTS 253

[Close]

BLAST of IVF0013752 vs. ExPASy TrEMBL
Match: A0A6J1KUZ4 (Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC111498940 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.1e-106
Identity = 211/254 (83.07%), Postives = 229/254 (90.16%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYE D+ ENDDVEM DVEEGE ++ NI+ EKSS TDVQAPS D RSKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGELVEGNISTEKSSLTDVQAPSIDHRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           RR+KKKKNKRK+ E GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSE IKEV
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSEFIKEV 120

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           E  K SSQ+V HLFS+ G+S++ PD +QS T   N+SKESNSEEKRSS+ +RLRVP+SYD
Sbjct: 181 EIGKASSQEVLHLFSQ-GASQDQPDSIQSLTPLQNQSKESNSEEKRSSVLERLRVPVSYD 240

Query: 241 DDLLQENPKEEDTT 255
           DD+L+ENPKEEDTT
Sbjct: 241 DDILRENPKEEDTT 253

[Close]

BLAST of IVF0013752 vs. NCBI nr
Match: KAA0040009.1 (uncharacterized protein E6C27_scaffold122G002920 [Cucumis melo var. makuwa] >TYK24493.1 uncharacterized protein E5676_scaffold266G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 485 bits (1249), Expect = 1.93e-172
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 241 DDLLQENPKEEDTTRL 256
           DDLLQENPKEEDTTRL
Sbjct: 241 DDLLQENPKEEDTTRL 256

[Close]

BLAST of IVF0013752 vs. NCBI nr
Match: XP_008460135.1 (PREDICTED: uncharacterized protein LOC103499036 [Cucumis melo])

HSP 1 Score: 477 bits (1228), Expect = 3.07e-169
Identity = 253/256 (98.83%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREA 
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAR 180

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 241 DDLLQENPKEEDTTRL 256
           DDLLQENPKEEDTT L
Sbjct: 241 DDLLQENPKEEDTTLL 256

[Close]

BLAST of IVF0013752 vs. NCBI nr
Match: XP_004144996.1 (uncharacterized protein LOC101205280 isoform X1 [Cucumis sativus])

HSP 1 Score: 450 bits (1157), Expect = 2.26e-158
Identity = 240/254 (94.49%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREAT
Sbjct: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           ETEKESSQKVPHLFSEG SSRNLPDHVQSF+SELN+SKESNSEEK SSIHDRLRVP+SYD
Sbjct: 184 ETEKESSQKVPHLFSEG-SSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYD 243

Query: 241 DDLLQENPKEEDTT 254
           DDLLQENPKEEDTT
Sbjct: 244 DDLLQENPKEEDTT 256

[Close]

BLAST of IVF0013752 vs. NCBI nr
Match: XP_031744074.1 (uncharacterized protein LOC101205280 isoform X2 [Cucumis sativus] >KAE8646696.1 hypothetical protein Csa_005172 [Cucumis sativus])

HSP 1 Score: 431 bits (1108), Expect = 5.14e-151
Identity = 234/254 (92.13%), Postives = 239/254 (94.09%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
            RTKKKKNKRKSSEPGSNGTDINR        LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 64  HRTKKKKNKRKSSEPGSNGTDINRL-------LKEKKSYMVYTAVGCLGVSALSELIKEV 123

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREAT
Sbjct: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           ETEKESSQKVPHLFSEG SSRNLPDHVQSF+SELN+SKESNSEEK SSIHDRLRVP+SYD
Sbjct: 184 ETEKESSQKVPHLFSEG-SSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYD 243

Query: 241 DDLLQENPKEEDTT 254
           DDLLQENPKEEDTT
Sbjct: 244 DDLLQENPKEEDTT 249

[Close]

BLAST of IVF0013752 vs. NCBI nr
Match: XP_023547831.1 (uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406 bits (1044), Expect = 2.99e-141
Identity = 216/254 (85.04%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYE D+ ENDDVEM DVEEGEF++ NI+ EKSS TDVQAPS D RSKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNISTEKSSLTDVQAPSIDHRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           RR+KKKKNKRK+ E GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240
           E  K SSQ+V HLFSEG S ++ PD +QS T E N+SKESNSEEKRSS+H+RLRVP+SYD
Sbjct: 181 EIGKASSQEVLHLFSEGAS-QDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVSYD 240

Query: 241 DDLLQENPKEEDTT 254
           DD+L+ENPKEEDTT
Sbjct: 241 DDILRENPKEEDTT 253

[Close]

BLAST of IVF0013752 vs. TAIR 10
Match: AT3G20430.1 (CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 191.4 bits (485), Expect = 8.8e-49
Identity = 121/265 (45.66%), Postives = 171/265 (64.53%), Query Frame = 0


Query: 1   MDGHENILEAIYEADEFEN-DDVEMADVEEGEF-IDANI------NIEKSSFTDVQAPST 60
           M+G E++L+AI E D FEN +DVEM DVEEGE  +D ++      N +     D +A   
Sbjct: 1   MEGEESLLDAINEEDGFENLEDVEMVDVEEGEIVVDHDLDSGERQNDDGDGVKDKEAILG 60

Query: 61  DQRSKNRKRRTKKKKNKRKSSEP-GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVS 120
           ++    +  + K+KK K+K   P       ++ FV D CRRLKEKKSYM+YTAVGCLG++
Sbjct: 61  EKNGLQQTNKNKRKKKKKKRKGPVMDKPMSVDWFVRDTCRRLKEKKSYMIYTAVGCLGIA 120

Query: 121 ALSELIKEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFK 180
           ALS+L+ EV A++ CGGQ+TADG R RT GG+LW+IIK R+P AY+EIMK+ KEFEKQF+
Sbjct: 121 ALSDLVNEVVAIETCGGQVTADGTRKRTSGGVLWNIIKARQPEAYREIMKKTKEFEKQFR 180

Query: 181 QPNIRREATETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSEL-----NRSKESNSEEKR 240
           QPN R ++     + S       SEG +S N+    ++  SE+         ES  E++R
Sbjct: 181 QPNTRPKSGPKRDQGSS------SEGLASGNVSAD-EALVSEMCVMPVAEQTESKPEKER 240

Query: 241 SSIHDRLRVPISYDDDLLQENPKEE 252
            S+H+R+RVP+SY DDL ++ P ++
Sbjct: 241 KSVHERIRVPVSY-DDLFRDAPLDD 257

The following BLAST results are available for this feature:

BLAST of IVF0013752 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0013752 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLH5	6.9e-134	100.00	Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CD38	1.9e-131	98.83	Phosphorylated adapter RNA export protein OS=Cucumis melo OX=3656 GN=LOC10349903...	[more]
A0A0A0KBJ7	3.2e-123	94.49	Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G07...	[more]
A0A6J1H592	4.5e-109	84.25	Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KUZ4	2.1e-106	83.07	Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of IVF0013752 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040009.1	1.93e-172	100.00	uncharacterized protein E6C27_scaffold122G002920 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008460135.1	3.07e-169	98.83	PREDICTED: uncharacterized protein LOC103499036 [Cucumis melo]	[more]
XP_004144996.1	2.26e-158	94.49	uncharacterized protein LOC101205280 isoform X1 [Cucumis sativus]	[more]
XP_031744074.1	5.14e-151	92.13	uncharacterized protein LOC101205280 isoform X2 [Cucumis sativus] >KAE8646696.1 ...	[more]
XP_023547831.1	2.99e-141	85.04	uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0013752 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20430.1	8.8e-49	45.66	CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-bindi...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019385	Phosphorylated adapter RNA export protein, RNA-binding domain	PFAM	PF10258	RNA_GG_bind	coord: 87..165 e-value: 2.3E-23 score: 82.0
IPR038092	Phosphorylated adapter RNA export protein, RNA-binding domain superfamily	GENE3D	1.10.10.1440		coord: 77..174 e-value: 3.1E-31 score: 109.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..71
IPR039047	Phosphorylated adapter RNA export protein	PANTHER	PTHR13135	CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013752.2	IVF0013752.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006408	snRNA export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding