IVF0013692 (gene) Melon (IVF77) v1

Overview


Name	IVF0013692
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Thioredoxin-like 4
Location	chr03: 26078780 .. 26080492 (+)
RNA-Seq Expression	IVF0013692
Synteny	IVF0013692

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAATTGCTATCCACTCAATGTTGGGCTTCCAAATCCGGGCCTTTTCAAATAGGAACTCATCGAGCAACCCATGTCAACGCAACAACCCACGTGAAAGAAAATCGATGGCAAAGGAAGAAAGAAGATAATGATGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGTTCTTCTTCCCGCTCGGAGGTAATCCGCTGGTCCTTCATTTGTTGCTTTACCCCTTAAACTTTTACACCTTTCATTCTCCTACAGTTACTTTTCATCCTCTTTCTGAATCGATAATCGAAATTTTCTCCTCCTTTAACATGATTAATGTCAAATAAGATTTATGAGTTTGAAACATTGTCTTGAATGCTACATCTGAATATGATATATTGCTCAGTTTTATTAGAGCTTTCTGACTGAAGTTCATTCACTAAAGAACTCCCAAATCGGAGTTTTGGGTATATATATATATATATATATATGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAACTTTGATCAGTTTTGGATTACACCCAAATGAGAAACTGGAGTCGAGAATCCCCATTTTGATTCCCCGCTGGCTTTCGTCGGAGAAAGAACCCGTTCGATTGTCGATTACAAGACCCGAAGTTCAAAGACACCAATTGTTGTACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGATGGGTGATGAGGATGATGATCTTTGCCCTGTAGACTGTGTGCGGGAATTCAAGACGGACGAAGAGTTCATTAAAATTCTAGACAAGGCGAAGGAAAACGGCGGTTTGGTAGTTGTGGACTTTTATCGAACATCTTGTGGGAGCTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTGAGTGTTTCGTATTTAGCCATGTTTTCCTGGGAAAGTGACTTCCTTTCGAATCACTGAATGGTTATTATGCTTTGAATTTGATTGTGTGTTTTAGGTCATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGGTAAGCTTGTTTTCTCTTCTTGATTGCCATGTTGGGTTTCTGTTGAATTGGACCCAAGTTTTGACAAACTGTTTTTAGACTAAAATTATTGTACTTTCCTTTTTTAATTTTTAATGATTTCAGCTATTTTTAAAATAATAATAATATTATTATTATTTAGGTAGAAAACCATTAAAGTTTAAGTGCTTAATTCGTAAGATGTGTGGGTGTATTTGTTCATTTTAGTTCACTGATGTTGAAATTTGACGATGGCATTGCAGAGTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTGTTAGAAGCATTTCCTACAAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCCTCTTCTCCACTTCAAATTTAATTTGATCATTATTCTTGTGGCCTTGCACCTTTTGTAAAATAATAATACCAAACAAAACCATGAATCTGATACAAACCCCATTCATCCCGTTTATGTGACAATGTTAGTTATCATATCTTGGGAGGAACCATATTCTTGATCATCATATTTTGTGTTATGTAAGATCAAATATTAGAAGATATTCAGACATGGGAACCTCTTCTAGTTTGTGCTTTTGTTTAATCTCTTGTTTGAAATAGGTAGCAGCAGCAGAAAG

mRNA sequence

GAAAAATTGCTATCCACTCAATGTTGGGCTTCCAAATCCGGGCCTTTTCAAATAGGAACTCATCGAGCAACCCATGTCAACGCAACAACCCACGTGAAAGAAAATCGATGGCAAAGGAAGAAAGAAGATAATGATGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGTTCTTCTTCCCGCTCGGAGAACTCCCAAATCGGAGTTTTGGGTATATATATATATATATATATATGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAACTTTGATCAGTTTTGGATTACACCCAAATGAGAAACTGGAGTCGAGAATCCCCATTTTGATTCCCCGCTGGCTTTCGTCGGAGAAAGAACCCGTTCGATTGTCGATTACAAGACCCGAAGTTCAAAGACACCAATTGTTGTACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGATGGGTGATGAGGATGATGATCTTTGCCCTGTAGACTGTGTGCGGGAATTCAAGACGGACGAAGAGTTCATTAAAATTCTAGACAAGGCGAAGGAAAACGGCGGTTTGGTAGTTGTGGACTTTTATCGAACATCTTGTGGGAGCTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTCATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGAGTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTGTTAGAAGCATTTCCTACAAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCCTCTTCTCCACTTCAAATTTAATTTGATCATTATTCTTGTGGCCTTGCACCTTTTGTAAAATAATAATACCAAACAAAACCATGAATCTGATACAAACCCCATTCATCCCGTTTATGTGACAATGTTAGTTATCATATCTTGGGAGGAACCATATTCTTGATCATCATATTTTGTGTTATGTAAGATCAAATATTAGAAGATATTCAGACATGGGAACCTCTTCTAGTTTGTGCTTTTGTTTAATCTCTTGTTTGAAATAGGTAGCAGCAGCAGAAAG

Coding sequence (CDS)

ATGATGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGTTCTTCTTCCCGCTCGGAGAACTCCCAAATCGGAGTTTTGGGTATATATATATATATATATATATGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAACTTTGATCAGTTTTGGATTACACCCAAATGAGAAACTGGAGTCGAGAATCCCCATTTTGATTCCCCGCTGGCTTTCGTCGGAGAAAGAACCCGTTCGATTGTCGATTACAAGACCCGAAGTTCAAAGACACCAATTGTTGTACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGATGGGTGATGAGGATGATGATCTTTGCCCTGTAGACTGTGTGCGGGAATTCAAGACGGACGAAGAGTTCATTAAAATTCTAGACAAGGCGAAGGAAAACGGCGGTTTGGTAGTTGTGGACTTTTATCGAACATCTTGTGGGAGCTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTCATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGAGTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTGTTAGAAGCATTTCCTACAAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCCTCTTCTCCACTTCAAATTTAA

Protein sequence

MMESCHFLVRSCSSVLLPARRTPKSEFWVYIYIYIYVAMQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLYKSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQI

Homology

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BLAST of IVF0013692 vs. ExPASy Swiss-Prot
Match: Q9C5C5 (Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g07700 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-56
Identity = 103/133 (77.44%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 108 NQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGF 167
           N  E+ DE+DDLCPV+CV EFKTD+E + +L+K+KE   LVVVDFYRT+CGSCKYIEQGF
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 168 AKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDK 227
           +KLCK SGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK+VPLFHFYK+GVLLE+F TRDK
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 189

Query: 228 ERILTAITKYSSS 241
           ERI  AI KY+SS
Sbjct: 190 ERIDAAILKYTSS 202

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BLAST of IVF0013692 vs. ExPASy Swiss-Prot
Match: Q6YTI3 (Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0567100 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.7e-51
Identity = 94/130 (72.31%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 114 DEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKG 173
           +E+++ CPV+CV EFKT+EE  ++L++AK  G LVVVDF+R SCGSCKYIEQGF KLCKG
Sbjct: 74  EEEEEFCPVECVTEFKTEEELARVLERAKATGALVVVDFFRPSCGSCKYIEQGFMKLCKG 133

Query: 174 SGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTA 233
           SGD  + V+FLKHNV+DEYDEQSEVA+RLRIK VPLFHFYK+GVLLEAF TRDKERI+ A
Sbjct: 134 SGDHGSSVVFLKHNVIDEYDEQSEVADRLRIKVVPLFHFYKNGVLLEAFATRDKERIIAA 193

Query: 234 ITKYS--SSP 242
           I KY+  SSP
Sbjct: 194 IQKYTAPSSP 203

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BLAST of IVF0013692 vs. ExPASy Swiss-Prot
Match: P10639 (Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3)

HSP 1 Score: 65.9 bits (159), Expect = 7.5e-10
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 125 VREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFL 184
           V+  ++ E F + L  A +   LVVVDF  T CG CK I+  F  LC    D+ + V+FL
Sbjct: 2   VKLIESKEAFQEALAAAGDK--LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFL 61

Query: 185 KHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAITKYS 239
           + +V    D+  +VA    +K +P F FYK G  +  F   +KE++  +IT+Y+
Sbjct: 62  EVDV----DDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEYA 105

[Close]

BLAST of IVF0013692 vs. ExPASy Swiss-Prot
Match: P11232 (Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.8e-09
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 125 VREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFL 184
           V+  ++ E F + L  A +   LVVVDF  T CG CK I+  F  LC    D+ + V+FL
Sbjct: 2   VKLIESKEAFQEALAAAGDK--LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFL 61

Query: 185 KHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAITKYS 239
           + +V    D+  +VA    +K +P F FYK G  +  F   +KE++   IT+++
Sbjct: 62  EVDV----DDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEATITEFA 105

[Close]

BLAST of IVF0013692 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.3e-09
Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 132 EEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDE 191
           +EF   + KAKE G +V++DF  + CG C++I   FA+  K    +    +FLK +V   
Sbjct: 15  DEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAK----KFPGAVFLKVDV--- 74

Query: 192 YDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAITKY 238
            DE  EVAE+  ++++P F F KDG   +      K+ +   I K+
Sbjct: 75  -DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of IVF0013692 vs. ExPASy TrEMBL
Match: A0A5A7UYD0 (Thioredoxin-like 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00350 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.0e-114
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 39  MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 98
           MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 60

Query: 99  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 158
           KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 159 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 218
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

Query: 219 LEAFPTRDKERILTAITKYSSSPLQI 245
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]

BLAST of IVF0013692 vs. ExPASy TrEMBL
Match: A0A1S3BBI1 (thioredoxin-like 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487891 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 9.8e-114
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 39  MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 98
           MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEV RHQLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVPRHQLLY 60

Query: 99  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 158
           KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 159 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 218
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

Query: 219 LEAFPTRDKERILTAITKYSSSPLQI 245
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]

BLAST of IVF0013692 vs. ExPASy TrEMBL
Match: A0A0A0LP39 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357300 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.6e-110
Identity = 198/206 (96.12%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 39  MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 98
           MQRQNQNVLQCKTLISFGL+PNEK+E RIPILIPRWLSSEKEPVRLSITRPEV R+QLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60

Query: 99  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 158
           KSKMRVNAGNQGE+ DEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 159 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 218
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180

Query: 219 LEAFPTRDKERILTAITKYSSSPLQI 245
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]

BLAST of IVF0013692 vs. ExPASy TrEMBL
Match: A0A6J1GH82 (thioredoxin-like 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454145 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.4e-96
Identity = 188/250 (75.20%), Postives = 209/250 (83.60%), Query Frame = 0


Query: 1   MMESCHFLVRSCSSVLLPARRTPKSEFWVYIYIYIYVAMQRQNQNVLQCKTLISFGLHPN 60
           M+ESCHFLVRSCSS LLPA+  P     +     +YVAMQRQNQNVL+CK L+S G    
Sbjct: 1   MVESCHFLVRSCSSALLPAQSFPIEVHSLNKTQILYVAMQRQNQNVLKCKALLSVG---- 60

Query: 61  EKLESR-IPILIPRWLSSEKEPVRLSITRPEVQ-----RHQLLYKSKMRVNAGNQGEMGD 120
            KLESR IPI IP WL SE   VRLSITRPE       RH+L++KSK RV AGNQG + D
Sbjct: 61  -KLESRIIPISIPFWL-SENPHVRLSITRPEAPPYLSIRHELMFKSKPRVAAGNQGGLSD 120

Query: 121 EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 180
           EDDDLCPV+CVREFKTDEEFI+IL++AKE+G LVVVDFYRTSCGSCKYIEQGFAKLC+GS
Sbjct: 121 EDDDLCPVECVREFKTDEEFIRILERAKESGALVVVDFYRTSCGSCKYIEQGFAKLCRGS 180

Query: 181 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAI 240
           GDQ+APVIFLKHNV+DEYDEQSEVAERLRIK+VPLFHFYKDGVLLEAFPTRDKERIL AI
Sbjct: 181 GDQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAI 240

Query: 241 TKYSSSPLQI 245
           TKYSS+ LQ+
Sbjct: 241 TKYSSTALQL 244

[Close]

BLAST of IVF0013692 vs. ExPASy TrEMBL
Match: A0A6J1KM94 (thioredoxin-like 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495910 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.8e-84
Identity = 165/212 (77.83%), Postives = 182/212 (85.85%), Query Frame = 0


Query: 39  MQRQNQNVLQCKTLISFGLHPNEKLESR-IPILIPRWLSSEKEPVRLSITRPEVQ----- 98
           MQRQNQNVL+CK L SFG H     ESR IPI IP WL SE   VRLSI RPE       
Sbjct: 1   MQRQNQNVLKCKALPSFGKH-----ESRIIPISIPFWL-SENPHVRLSIIRPEAPPYLSI 60

Query: 99  RHQLLYKSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDF 158
           RH+L++KSK RV AGNQG + DEDDDLCPV+CVREFKTDEEFI+IL++AK++G LVVVDF
Sbjct: 61  RHELMFKSKPRVAAGNQGGLSDEDDDLCPVECVREFKTDEEFIRILERAKKSGALVVVDF 120

Query: 159 YRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHF 218
           YRTSCGSCKYIEQGFAKLC+GSGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK+VPLFHF
Sbjct: 121 YRTSCGSCKYIEQGFAKLCRGSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHF 180

Query: 219 YKDGVLLEAFPTRDKERILTAITKYSSSPLQI 245
           YKDGVLLEAFPTRDKERIL AITKYSS+ LQ+
Sbjct: 181 YKDGVLLEAFPTRDKERILAAITKYSSTALQL 206

[Close]

BLAST of IVF0013692 vs. NCBI nr
Match: KAA0060902.1 (thioredoxin-like 4 [Cucumis melo var. makuwa])

HSP 1 Score: 418 bits (1075), Expect = 6.48e-147
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 39  MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 98
           MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 60

Query: 99  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 158
           KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 159 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 218
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

Query: 219 LEAFPTRDKERILTAITKYSSSPLQI 244
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]

BLAST of IVF0013692 vs. NCBI nr
Match: XP_008444622.1 (PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo])

HSP 1 Score: 416 bits (1069), Expect = 5.32e-146
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 39  MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 98
           MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEV RHQLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVPRHQLLY 60

Query: 99  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 158
           KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 159 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 218
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

Query: 219 LEAFPTRDKERILTAITKYSSSPLQI 244
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]

BLAST of IVF0013692 vs. NCBI nr
Match: XP_004150883.1 (thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_011649582.1 thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_031736609.1 thioredoxin-like 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 403 bits (1036), Expect = 5.70e-141
Identity = 198/206 (96.12%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 39  MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 98
           MQRQNQNVLQCKTLISFGL+PNEK+E RIPILIPRWLSSEKEPVRLSITRPEV R+QLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60

Query: 99  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 158
           KSKMRVNAGNQGE+ DEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 159 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 218
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180

Query: 219 LEAFPTRDKERILTAITKYSSSPLQI 244
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]

BLAST of IVF0013692 vs. NCBI nr
Match: XP_038886222.1 (thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886223.1 thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886224.1 thioredoxin-like 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 372 bits (955), Expect = 1.26e-128
Identity = 183/206 (88.83%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 39  MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 98
           MQRQN+NVLQCK LISFGL+PNE+LESRIPI IPRWLSSEK  VRLSITRPEV R QLL+
Sbjct: 1   MQRQNRNVLQCKALISFGLNPNEELESRIPISIPRWLSSEKGNVRLSITRPEVPRQQLLF 60

Query: 99  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 158
           KSK+RV AGNQGE+ D+DD+LCPVDCVREFKTDEEF+KILD+AKENG LVVVDFYRTSCG
Sbjct: 61  KSKIRVTAGNQGELFDDDDELCPVDCVREFKTDEEFLKILDRAKENGTLVVVDFYRTSCG 120

Query: 159 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 218
           SCKYIEQGFAKLCKGSGDQ+APVIFLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180

Query: 219 LEAFPTRDKERILTAITKYSSSPLQI 244
           LEAFPTRDKERILTAI+KYSSS LQI
Sbjct: 181 LEAFPTRDKERILTAISKYSSSALQI 206

[Close]

BLAST of IVF0013692 vs. NCBI nr
Match: KAE8652091.1 (hypothetical protein Csa_022233 [Cucumis sativus])

HSP 1 Score: 356 bits (913), Expect = 1.34e-122
Identity = 175/182 (96.15%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 63  LESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLYKSKMRVNAGNQGEMGDEDDDLCPV 122
           +E RIPILIPRWLSSEKEPVRLSITRPEV R+QLLYKSKMRVNAGNQGE+ DEDDDLCPV
Sbjct: 1   MEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLYKSKMRVNAGNQGELSDEDDDLCPV 60

Query: 123 DCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVI 182
           DCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVI
Sbjct: 61  DCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVI 120

Query: 183 FLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPL 242
           FLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPL
Sbjct: 121 FLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPL 180

Query: 243 QI 244
           QI
Sbjct: 181 QI 182

[Close]

BLAST of IVF0013692 vs. TAIR 10
Match: AT1G07700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 7.5e-58
Identity = 103/133 (77.44%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 108 NQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGF 167
           N  E+ DE+DDLCPV+CV EFKTD+E + +L+K+KE   LVVVDFYRT+CGSCKYIEQGF
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 168 AKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDK 227
           +KLCK SGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK+VPLFHFYK+GVLLE+F TRDK
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 189

Query: 228 ERILTAITKYSSS 241
           ERI  AI KY+SS
Sbjct: 190 ERIDAAILKYTSS 202

[Close]

BLAST of IVF0013692 vs. TAIR 10
Match: AT1G07700.3 (Thioredoxin superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 7.5e-58
Identity = 103/133 (77.44%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 108 NQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGF 167
           N  E+ DE+DDLCPV+CV EFKTD+E + +L+K+KE   LVVVDFYRT+CGSCKYIEQGF
Sbjct: 83  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 142

Query: 168 AKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDK 227
           +KLCK SGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK+VPLFHFYK+GVLLE+F TRDK
Sbjct: 143 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 202

Query: 228 ERILTAITKYSSS 241
           ERI  AI KY+SS
Sbjct: 203 ERIDAAILKYTSS 215

[Close]

BLAST of IVF0013692 vs. TAIR 10
Match: AT1G07700.2 (Thioredoxin superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 5.2e-43
Identity = 78/102 (76.47%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 108 NQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGF 167
           N  E+ DE+DDLCPV+CV EFKTD+E + +L+K+KE   LVVVDFYRT+CGSCKYIEQGF
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 168 AKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPL 210
           +KLCK SGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK +PL
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKVIPL 171

[Close]

BLAST of IVF0013692 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 62.0 bits (149), Expect = 7.6e-10
Identity = 36/110 (32.73%), Postives = 59/110 (53.64%), Query Frame = 0


Query: 130 TDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVM 189
           T E++ + L  A E+  L+V+DF  T C  C++I   FA L K    +   V+F K +V 
Sbjct: 12  TVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAK----KHLDVVFFKVDV- 71

Query: 190 DEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAITKYSS 240
              DE + VAE  +++++P F F K+G + E      KE I+  + K+ +
Sbjct: 72  ---DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

[Close]

BLAST of IVF0013692 vs. TAIR 10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1 )

HSP 1 Score: 60.1 bits (144), Expect = 2.9e-09
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 132 EEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDE 191
           E+F+  L  A +   LV+VDFY T CGSC+ +   F KLCK +  +   ++FLK N    
Sbjct: 102 EQFLNALKDAGDR--LVIVDFYGTWCGSCRAM---FPKLCK-TAKEHPNILFLKVN---- 161

Query: 192 YDEQSEVAERLRIKSVPLFHFYK 215
           +DE   + + L +K +P FHFY+
Sbjct: 162 FDENKSLCKSLNVKVLPYFHFYR 174

The following BLAST results are available for this feature:

BLAST of IVF0013692 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5C5	1.1e-56	77.44	Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g07700 P...	[more]
Q6YTI3	6.7e-51	72.31	Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]
P10639	7.5e-10	35.96	Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3	[more]
P11232	2.8e-09	35.09	Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2	[more]
Q0D840	6.3e-09	33.96	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]

BLAST of IVF0013692 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UYD0	2.0e-114	100.00	Thioredoxin-like 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G0...	[more]
A0A1S3BBI1	9.8e-114	99.51	thioredoxin-like 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487891 PE=4 S...	[more]
A0A0A0LP39	6.6e-110	96.12	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357300...	[more]
A0A6J1GH82	2.4e-96	75.20	thioredoxin-like 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454145 ...	[more]
A0A6J1KM94	2.8e-84	77.83	thioredoxin-like 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495910 PE...	[more]

BLAST of IVF0013692 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060902.1	6.48e-147	100.00	thioredoxin-like 4 [Cucumis melo var. makuwa]	[more]
XP_008444622.1	5.32e-146	99.51	PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo]	[more]
XP_004150883.1	5.70e-141	96.12	thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_011649582.1 thioredoxin-...	[more]
XP_038886222.1	1.26e-128	88.83	thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886223.1 thioredoxi...	[more]
KAE8652091.1	1.34e-122	96.15	hypothetical protein Csa_022233 [Cucumis sativus]	[more]

BLAST of IVF0013692 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07700.1	7.5e-58	77.44	Thioredoxin superfamily protein	[more]
AT1G07700.3	7.5e-58	77.44	Thioredoxin superfamily protein	[more]
AT1G07700.2	5.2e-43	76.47	Thioredoxin superfamily protein	[more]
AT5G42980.1	7.6e-10	32.73	thioredoxin 3	[more]
AT4G26160.1	2.9e-09	39.76	atypical CYS HIS rich thioredoxin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 129..234 e-value: 2.5E-11 score: 43.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 100..239 score: 9.728674
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 110..241 e-value: 4.7E-20 score: 73.6
None	No IPR available	CDD	cd02947	TRX_family	coord: 138..222 e-value: 2.70373E-19 score: 77.9836
IPR044176	Thioredoxin-like 4, chloroplastic	PANTHER	PTHR47912	THIOREDOXIN-LIKE 4, CHLOROPLASTIC	coord: 90..240
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 111..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013692.1	IVF0013692.1	mRNA