IVF0013681 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGCGAGGACGTTGACGACATGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACTTAGCCGAATTGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGCGAGGACGTTGACGACATGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACTTAGCCGAATTGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGCGAGGACGTTGACGACATGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACTTAGCCGAATTGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA Homology
BLAST of IVF0013681 vs. ExPASy TrEMBL
Match: A0A5A7U6D8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00620 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.2e-24 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0013681 vs. ExPASy TrEMBL
Match: A0A5D3C8Z4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00530 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.2e-24 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0013681 vs. ExPASy TrEMBL
Match: A0A5A7VK86 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001570 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21 Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0013681 vs. ExPASy TrEMBL
Match: A0A5D3BDZ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00280 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21 Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0013681 vs. ExPASy TrEMBL
Match: A0A5A7SL78 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00920 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21 Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0013681 vs. NCBI nr
Match: TYK07648.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 118 bits (296), Expect = 6.70e-31 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0013681 vs. NCBI nr
Match: KAA0049907.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 118 bits (296), Expect = 7.75e-31 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0013681 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (273), Expect = 4.37e-30 Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0013681 vs. NCBI nr
Match: TYK05336.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (272), Expect = 2.64e-29 Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0013681 vs. NCBI nr
Match: KAA0062284.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (267), Expect = 1.52e-28 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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