IVF0013595 (gene) Melon (IVF77) v1

Overview
NameIVF0013595
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 6577846 .. 6578347 (-)
RNA-Seq ExpressionIVF0013595
SyntenyIVF0013595
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAACTATTTAAACTCTCACCACTTCCTCTCTTCCTATAAACTATTAACTCTCCAAAATATGAAATTCAGAGTCTTCTCCGCCAACAATCCGGTGGTTCCGGAGAAAGCACAGACGGCTTTGGAGCCTGCGATTGTGTATAGAGGTGCCGGAAATATGAAATCTGTGATTCCCAAGAAGAGGAAGTTAGTGAAGAGGATGATGTACGATTGTATTAAAGAATGGATCAAATCCCTCTTTCGTCCCACGCCGGAACTTCGGTAATCGCGGAAAACCCAGTTCCCAACGCTTTTAATCATCGTCTTCATCATCATCATCATCTCAATGGTTTCATCATGTTATTGTTTTTGTTTTCTTGTGTAAAAGGCTCTGTTTTTGTTCCCTGTTTCATCTAATAACTCAGAAAACAGAGTCTTTTTCATTTCTTTTCTTTTTGAATGTGATGCAATTAAGTAGTGTTTTGTTCTTTATGTCATGGTCAGTGTTGTTTATCAATGGAATAG

mRNA sequence

CTAACTATTTAAACTCTCACCACTTCCTCTCTTCCTATAAACTATTAACTCTCCAAAATATGAAATTCAGAGTCTTCTCCGCCAACAATCCGGTGGTTCCGGAGAAAGCACAGACGGCTTTGGAGCCTGCGATTGTGTATAGAGGTGCCGGAAATATGAAATCTGTGATTCCCAAGAAGAGGAAGTTAGTGAAGAGGATGATGTACGATTGTATTAAAGAATGGATCAAATCCCTCTTTCGTCCCACGCCGGAACTTCGGTAATCGCGGAAAACCCAGTTCCCAACGCTTTTAATCATCGTCTTCATCATCATCATCATCTCAATGGTTTCATCATGTTATTGTTTTTGTTTTCTTGTGTAAAAGGCTCTGTTTTTGTTCCCTGTTTCATCTAATAACTCAGAAAACAGAGTCTTTTTCATTTCTTTTCTTTTTGAATGTGATGCAATTAAGTAGTGTTTTGTTCTTTATGTCATGGTCAGTGTTGTTTATCAATGGAATAG

Coding sequence (CDS)

ATGAAATTCAGAGTCTTCTCCGCCAACAATCCGGTGGTTCCGGAGAAAGCACAGACGGCTTTGGAGCCTGCGATTGTGTATAGAGGTGCCGGAAATATGAAATCTGTGATTCCCAAGAAGAGGAAGTTAGTGAAGAGGATGATGTACGATTGTATTAAAGAATGGATCAAATCCCTCTTTCGTCCCACGCCGGAACTTCGGTAA

Protein sequence

MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLFRPTPELR
Homology
BLAST of IVF0013595 vs. ExPASy TrEMBL
Match: A0A5D3D590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00190 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.0e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query: 1  MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60
          MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF
Sbjct: 1  MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60

Query: 61 RPTPELR 68
          RPTPELR
Sbjct: 61 RPTPELR 67

BLAST of IVF0013595 vs. ExPASy TrEMBL
Match: A0A0A0KFQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374720 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.9e-19
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 0

Query: 1  MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60
          MKFRVFS NN V+P K++TA    IVY GAGN+KSVIPKKR+LVKRMMYDCIKEWIKSLF
Sbjct: 1  MKFRVFSGNNQVIPAKSETA---TIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLF 60

Query: 61 RPTPEL 67
           PTP+L
Sbjct: 61 CPTPKL 63

BLAST of IVF0013595 vs. ExPASy TrEMBL
Match: A0A6J1CJW3 (uncharacterized protein LOC111011963 OS=Momordica charantia OX=3673 GN=LOC111011963 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.0e-05
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 9  NNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLFRPTP 65
          NNPV+  +       AI  R  G +KSVIPK+R LVK M+Y+ IK++I SLFRP P
Sbjct: 28 NNPVMISEMAVTANGAIGSRAGGKVKSVIPKRRILVKTMIYNFIKDFIISLFRPPP 83

BLAST of IVF0013595 vs. NCBI nr
Match: TYK18680.1 (hypothetical protein E5676_scaffold481G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 1.75e-41
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query: 1  MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60
          MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF
Sbjct: 1  MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60

Query: 61 RPTPELR 67
          RPTPELR
Sbjct: 61 RPTPELR 67

BLAST of IVF0013595 vs. NCBI nr
Match: KAE8647261.1 (hypothetical protein Csa_018288 [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 8.83e-28
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 0

Query: 1  MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60
          MKFRVFS NN V+P K++TA    IVY GAGN+KSVIPKKR+LVKRMMYDCIKEWIKSLF
Sbjct: 1  MKFRVFSGNNQVIPAKSETA---TIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLF 60

Query: 61 RPTPEL 66
           PTP+L
Sbjct: 61 CPTPKL 63

BLAST of IVF0013595 vs. NCBI nr
Match: KAG6602134.1 (hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.2 bits (165), Expect = 1.47e-12
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0

Query: 11  PVVPEKAQTALEP--AIVYR-GAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLFRPTPE 65
           P++P K  TA+    ++ YR G G +KSVIPKKRKLVK MMY CIK+++KSLFRP P+
Sbjct: 63  PLIPAKPDTAVTSTNSVEYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRPPPK 120

BLAST of IVF0013595 vs. NCBI nr
Match: KAG6602131.1 (hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.9 bits (154), Expect = 1.25e-10
Identity = 32/55 (58.18%), Postives = 36/55 (65.45%), Query Frame = 0

Query: 11  PVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLFRPTPE 65
           P  PE A T+        G G +KSVIPKKRKLVK MMY CIK +IKSLFR  P+
Sbjct: 97  PATPETAVTSTNSLGYRAGVGKVKSVIPKKRKLVKTMMYHCIKNFIKSLFRRPPK 151

BLAST of IVF0013595 vs. NCBI nr
Match: KAG6602132.1 (hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 57.8 bits (138), Expect = 2.08e-08
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 11  PVVPEKAQTA---LEPAIVYR-GAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLFRPTPE 65
           P++ E A T+   L  +  YR G G  KSVIPK+RKLVK MMY CIK ++KSLFR  PE
Sbjct: 73  PLIAETAVTSTGTLTDSHGYRVGIGKGKSVIPKRRKLVKTMMYHCIKNFLKSLFRRPPE 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D5907.0e-30100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KFQ11.9e-1977.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374720 PE=4 SV=1[more]
A0A6J1CJW36.0e-0551.79uncharacterized protein LOC111011963 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
Match NameE-valueIdentityDescription
TYK18680.11.75e-41100.00hypothetical protein E5676_scaffold481G00190 [Cucumis melo var. makuwa][more]
KAE8647261.18.83e-2877.27hypothetical protein Csa_018288 [Cucumis sativus][more]
KAG6602134.11.47e-1258.62hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6602131.11.25e-1058.18hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6602132.12.08e-0855.93hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0013595.1IVF0013595.1mRNA