IVF0013539 (gene) Melon (IVF77) v1

Overview


Name	IVF0013539
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	30S ribosomal protein S31, chloroplastic
Location	chr08: 30072090 .. 30073177 (-)
RNA-Seq Expression	IVF0013539
Synteny	IVF0013539

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGTGAGCTCCCCATATTTTGCCAGCCATCCATCCAATTCCCCTTTTAAACAAACCCACTCGACAGCTAACTAATAGCTCTTATTGAACGACATGTCGTTTGCAAAGAGCGCCAATCTTATATCTTTTTCGGAGCTCCGAAAACCCGCCCGGGTTAACTATAAAATCAGGACCATATCCATCACATTCTCCACTCGAAACTTATCCTTCTGATTCTCTCACAAGCGCTTGCTCGCTCTGCTTCATCTTCATCCATCCATGGGATCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCATCTCTCAATCCTCATTACTTCTCTTTCTCCAAGTCTGAAACCCTAGGAACATCTCTTCGTGCTTCTTCTACGGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTGGTATGCGTTTGTTAGCTTCACTTGGAGTATTTACATCGTTTCTGTTCACTTTTCATTGCTTAATTTCTGTTCTGTGTTTACCTTTTTCAGTATATTGTGGCAGAGGCGATAAGAAAACGGAAAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGTATGTGCCTATATGTTTTCTTGAGTTTCTGTTTGTCTTCGATGAGTTCCTCTATCGATTTTATATTTTGAATTTTGTTGTTCGGGGGGGCAAAATGTTCAGGCGAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCACCTAGGAAGGATAAATTTGACGACGACGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGCTAGCTAGTCATGGAACAATCTAATTCTGTTTATTTGAATGTGTTTTCTTAATTCAGAAGGTACTTCCACTTCTTCTAATAGCATTATTTTGTATGAATTCTTCAGTTGCTTATCAGCTTCTTGAATGTGTTGTTCGTTTTGAGTCAAACTCCAAGTACGGCCTCTCTATCTTTGTCTTTAACCATTTCGGAGCAGGAGTCTAAGCATCAATGCTTTATAGATAGTCTTTGCGTCAATACAGGCGTTTGTTTCAAAAGGAATTTAAGTTCACTTCCG

mRNA sequence

CCAGTGAGCTCCCCATATTTTGCCAGCCATCCATCCAATTCCCCTTTTAAACAAACCCACTCGACAGCTAACTAATAGCTCTTATTGAACGACATGTCGTTTGCAAAGAGCGCCAATCTTATATCTTTTTCGGAGCTCCGAAAACCCGCCCGGGTTAACTATAAAATCAGGACCATATCCATCACATTCTCCACTCGAAACTTATCCTTCTGATTCTCTCACAAGCGCTTGCTCGCTCTGCTTCATCTTCATCCATCCATGGGATCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCATCTCTCAATCCTCATTACTTCTCTTTCTCCAAGTCTGAAACCCTAGGAACATCTCTTCGTGCTTCTTCTACGGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTGTATATTGTGGCAGAGGCGATAAGAAAACGGAAAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGCGAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCACCTAGGAAGGATAAATTTGACGACGACGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGCTAGCTAGTCATGGAACAATCTAATTCTGTTTATTTGAATGTGTTTTCTTAATTCAGAAGGTACTTCCACTTCTTCTAATAGCATTATTTTGTATGAATTCTTCAGTTGCTTATCAGCTTCTTGAATGTGTTGTTCGTTTTGAGTCAAACTCCAAGTACGGCCTCTCTATCTTTGTCTTTAACCATTTCGGAGCAGGAGTCTAAGCATCAATGCTTTATAGATAGTCTTTGCGTCAATACAGGCGTTTGTTTCAAAAGGAATTTAAGTTCACTTCCG

Coding sequence (CDS)

ATGGGATCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCATCTCTCAATCCTCATTACTTCTCTTTCTCCAAGTCTGAAACCCTAGGAACATCTCTTCGTGCTTCTTCTACGGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTGTATATTGTGGCAGAGGCGATAAGAAAACGGAAAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGCGAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCACCTAGGAAGGATAAATTTGACGACGACGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGCTAGCTAG

Protein sequence

MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFAS

Homology

[Close]

BLAST of IVF0013539 vs. ExPASy Swiss-Prot
Match: O80439 (30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS31 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.8e-28
Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SL  G    P  + +L     S S SET G SL +  T   ++ST SS SSIP VYCG
Sbjct: 1   MASLILG--APPRVTVALPSSRLSSSHSETAGVSL-SCFTHQFSLST-SSSSSIPLVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGD+KT +GKRFNHS+GNARPR+K+KGRG  RVP PP+PPRKDKF++DEKIKI+IDESLF
Sbjct: 61  RGDRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLF 118

Query: 121 AS 123
           ++
Sbjct: 121 SN 118

[Close]

BLAST of IVF0013539 vs. ExPASy Swiss-Prot
Match: P47910 (30S ribosomal protein S31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS31 PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 48/95 (50.53%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 15  SPSLNPH--YFSFSKSETL-GTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKR 74
           +PS+  H   FSFS S+++ G SL +  T SL+ S  +SP ++P +YCGRGD+KT +GKR
Sbjct: 8   TPSMACHSVSFSFSHSQSVAGVSLSSPPTLSLSSSVSTSP-ALPLIYCGRGDRKTAKGKR 67

Query: 75  FNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFD 107
           FNHS+GNARP++K KGRG P+ P  P      K D
Sbjct: 68  FNHSFGNARPKNKNKGRGPPKAPIFPKGDPSQKED 101

[Close]

BLAST of IVF0013539 vs. ExPASy Swiss-Prot
Match: P47909 (30S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0528100 PE=3 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 48  PSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARP-RDKTKGRGTPRVPTPPSPP 101
           P   +   AV CGRGDKKT+RGKRF  SYGNARP R+K   R   RV  P S P
Sbjct: 21  PVISAEAEAVTCGRGDKKTKRGKRFKGSYGNARPKREKKIERIKDRVEVPRSTP 74

[Close]

BLAST of IVF0013539 vs. ExPASy TrEMBL
Match: A0A5A7TU27 (30S ribosomal protein S31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00930 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

Query: 121 AS 123
           AS
Sbjct: 121 AS 122

[Close]

BLAST of IVF0013539 vs. ExPASy TrEMBL
Match: A0A1S3BL51 (30S ribosomal protein S31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491228 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

Query: 121 AS 123
           AS
Sbjct: 121 AS 122

[Close]

BLAST of IVF0013539 vs. ExPASy TrEMBL
Match: A0A0A0KXY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308630 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.6e-51
Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SLPFGLLQAPSQS    P +FSFSKSE LGTSLRASSTASLAISTPSSPSSIPA+YCG
Sbjct: 1   MASLPFGLLQAPSQS----PRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDD+EKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 118

Query: 121 AS 123
            S
Sbjct: 121 GS 118

[Close]

BLAST of IVF0013539 vs. ExPASy TrEMBL
Match: A0A6J1DDL3 (30S ribosomal protein S31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019400 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.5e-49
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRA STASLA S  SSPSS+PAVYCG
Sbjct: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRA-STASLATSATSSPSSVPAVYCG 111

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF
Sbjct: 112 RGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLF 171

Query: 121 A 122
           A
Sbjct: 172 A 171

[Close]

BLAST of IVF0013539 vs. ExPASy TrEMBL
Match: A0A6J1HRX4 (30S ribosomal protein S31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466195 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.3e-45
Identity = 100/121 (82.64%), Postives = 106/121 (87.60%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SLPFGLLQA  QSP+L+P  FSFSKSETLGTSLR S+      S  SSPSSIPAVYCG
Sbjct: 1   MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF
Sbjct: 61  RGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 117

Query: 121 A 122
           +
Sbjct: 121 S 117

[Close]

BLAST of IVF0013539 vs. NCBI nr
Match: XP_008449316.1 (PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo] >KAA0045031.1 30S ribosomal protein S31 [Cucumis melo var. makuwa] >TYJ96295.1 30S ribosomal protein S31 [Cucumis melo var. makuwa])

HSP 1 Score: 237 bits (605), Expect = 1.16e-78
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

Query: 121 AS 122
           AS
Sbjct: 121 AS 122

[Close]

BLAST of IVF0013539 vs. NCBI nr
Match: XP_004147884.1 (30S ribosomal protein S31, chloroplastic [Cucumis sativus] >KGN54373.1 hypothetical protein Csa_018058 [Cucumis sativus])

HSP 1 Score: 211 bits (536), Expect = 3.39e-68
Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SLPFGLLQAPSQSP     +FSFSKSE LGTSLRASSTASLAISTPSSPSSIPA+YCG
Sbjct: 1   MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDD+EKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 118

Query: 121 AS 122
            S
Sbjct: 121 GS 118

[Close]

BLAST of IVF0013539 vs. NCBI nr
Match: XP_038882305.1 (30S ribosomal protein S31, chloroplastic [Benincasa hispida])

HSP 1 Score: 210 bits (535), Expect = 5.49e-68
Identity = 109/122 (89.34%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRASSTASLA ST SSPSSIPAVYCG
Sbjct: 1   MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRASSTASLATSTTSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTE+GKRFN SYGNARPR+KTKGRGTPRVPTPPSPPRKDKF+DDEKIKIEIDESLF
Sbjct: 61  RGDKKTEKGKRFNRSYGNARPRNKTKGRGTPRVPTPPSPPRKDKFEDDEKIKIEIDESLF 120

Query: 121 AS 122
           A+
Sbjct: 121 AN 122

[Close]

BLAST of IVF0013539 vs. NCBI nr
Match: XP_022151467.1 (30S ribosomal protein S31, chloroplastic [Momordica charantia])

HSP 1 Score: 204 bits (520), Expect = 5.44e-65
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRAS TASLA S  SSPSS+PAVYCG
Sbjct: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRAS-TASLATSATSSPSSVPAVYCG 111

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF
Sbjct: 112 RGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLF 171

[Close]

BLAST of IVF0013539 vs. NCBI nr
Match: XP_023517799.1 (30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (485), Expect = 2.02e-60
Identity = 101/121 (83.47%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SLPFGLLQA  QSP+L+P  FSFSKSETLGTSLR S+     IS  SSPSSIPAVYCG
Sbjct: 1   MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GISATSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF
Sbjct: 61  RGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 117

[Close]

BLAST of IVF0013539 vs. TAIR 10
Match: AT2G38140.1 (plastid-specific ribosomal protein 4 )

HSP 1 Score: 124.8 bits (312), Expect = 4.8e-29
Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60
           M SL  G    P  + +L     S S SET G SL +  T   ++ST SS SSIP VYCG
Sbjct: 1   MASLILG--APPRVTVALPSSRLSSSHSETAGVSL-SCFTHQFSLST-SSSSSIPLVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120
           RGD+KT +GKRFNHS+GNARPR+K+KGRG  RVP PP+PPRKDKF++DEKIKI+IDESLF
Sbjct: 61  RGDRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLF 118

Query: 121 AS 123
           ++
Sbjct: 121 SN 118

The following BLAST results are available for this feature:

BLAST of IVF0013539 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80439	6.8e-28	60.66	30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS3...	[more]
P47910	1.1e-14	50.53	30S ribosomal protein S31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS31 P...	[more]
P47909	2.8e-05	57.41	30S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of IVF0013539 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TU27	2.6e-59	100.00	30S ribosomal protein S31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BL51	2.6e-59	100.00	30S ribosomal protein S31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491228...	[more]
A0A0A0KXY4	2.6e-51	90.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308630 PE=3 SV=1	[more]
A0A6J1DDL3	2.5e-49	87.60	30S ribosomal protein S31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1HRX4	8.3e-45	82.64	30S ribosomal protein S31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]

BLAST of IVF0013539 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449316.1	1.16e-78	100.00	PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo] >KAA0045031.1...	[more]
XP_004147884.1	3.39e-68	90.98	30S ribosomal protein S31, chloroplastic [Cucumis sativus] >KGN54373.1 hypotheti...	[more]
XP_038882305.1	5.49e-68	89.34	30S ribosomal protein S31, chloroplastic [Benincasa hispida]	[more]
XP_022151467.1	5.44e-65	87.60	30S ribosomal protein S31, chloroplastic [Momordica charantia]	[more]
XP_023517799.1	2.02e-60	83.47	30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0013539 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38140.1	4.8e-29	60.66	plastid-specific ribosomal protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR030826	30S ribosomal protein	PFAM	PF17067	RPS31	coord: 15..103 e-value: 1.1E-30 score: 105.7
IPR030826	30S ribosomal protein	TIGRFAM	TIGR04560	TIGR04560	coord: 60..84 e-value: 6.6E-11 score: 40.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..110
None	No IPR available	PANTHER	PTHR34550:SF2	30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC	coord: 19..120
IPR044695	30S ribosomal protein S31, plant	PANTHER	PTHR34550	30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC	coord: 19..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013539.1	IVF0013539.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032544	plastid translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding