IVF0013537 (gene) Melon (IVF77) v1

Overview


Name	IVF0013537
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ras-related protein Rab11C-like
Location	chr04: 23693303 .. 23695282 (-)
RNA-Seq Expression	IVF0013537
Synteny	IVF0013537

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGGTTCTTATAGGTATTTGCATCTCATAAATCTCTTCGGTTTCAACTGAAATATTAGTTTCCTATAAGGACACTCACTCCCTCTTATAATGTTAATGTGATGTGCACCTTTTCATTTTGTCTGCTCATGAGATCTAAACATCTATTTCTTTTTATTCATTTTTTATTCTTCATCTGCAGCATAGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTATCAGAACACATTTGCTTTAGAACTTTTGAAGTGCTTTTTATCATGTTCTGTATACTTTCTTTTGGTTACAACTTGTAGGGCAGAGTTAGTAAAAGGGCTTGAAATTAAAAAAGGAGAATATAAATTTGGTTAAAACTATTCTATCACTGTTCTTTATGTTGCTACTGCAGCTTCTACTCCTAAAATTCATCATGATATCTCTAACATCTCTAATTTCCTCCTCTATAGCTTTTAAGTTCGACAGTAAGTACTGATTTGTATTGTTCTGTAGTTGTTCACTCCCAAATTGATATTGACATTCACTTGTTAGGCTTGGTCGAAATAGATCCAAACAAAAGAATGCCGCATTTCACCTCAGAGAGAAGAGGGTTAAATACATGGCTTTTCATTTCTTTTTTTTTACAAAGTAAAATGTTCTTTTAAGGAACTTCATTGCTAATTTTCATGGTATTTTTTTCTGTGGCTAATGTTATGTTTACCTTAGAATGTTTCGTATTTACTTTGATAGTTCATGATCTTCTTGTTCTTCATGATTTTCATATTTAATAGGAGGCTATTATCCCACCCCCAAGTTTTAATTCTCTTCCTTGACACCTACTAATATGCAGATCTATGCTCCAAGGTATTCATTCTTTTCTATACTAGAAAATTGTCGTTGTGCACTTCTTAATATCTTGTTGACTTGAGCTTCAGTTCTAGATTGTTGGTTCTAATTTTTTGGTTTGTGGTCATTTGATTTGTAACTTTGTTTGAAAATTCCACTGTTTACTCAATGATTCAATTCTATGAAGGATGAATTTTGTTATAGTTGTTTGAAATGAAACAAATTTTTGGTCTTGTGGCATTACACAATTGTGTGAATTTATAGATTTATACGTTTTTTTTTCTAGGTGTACAAATGAAACAAATTTTTGGTCTTGTAGCATTACACGATTGTTCGGCTTATTTTAATGCATCTCTCAATATTTACCTGCTTTCTAAATAGATATGTACTCAAGAAAATGATCGCGGTTAGTTTTCTATTGTTCTCTGTTGCTAATGGAACCCCAATCTTTATAGCTAAAATGACCCATTCAAGATTTATACTTTTTTTTTCTGAGTGTAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTAGTTTATTTAGAACCTATATCAACTATTTAATTGTTTGAAATGCTACTTATTATTCCCAAGATATGATCAAATTGACTTGGTTCTGCCTTTAAAATTTGTCAACTACAAATGAATTGCTAGTTAACTCGGGGGGTAAATAAATAGCTATTAACTTAGGAAATGTTTAATGTCTGCCTCACATTCAACGATAATGCTTAATGCATGTTACAAAACATATCACATAGAAATTGGAGAAAATATAAAGAATCCGGGGATTCTTCAATTCGCTTTTCAATTTGGGGATTCTCTTGCTCCTTAAATGTTTCCGTTTCAGCTACCTACTACAAATGATTCCAATTCTTTCAATTTTGTTTACTCAATTGTTGAATTTGATGTTTTTGGATTAGGTTTGTTCAAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG

mRNA sequence

ATGATTGGTTCTTATAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG

Coding sequence (CDS)

ATGATTGGTTCTTATAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG

Protein sequence

MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

Homology

[Close]

BLAST of IVF0013537 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.6e-18
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          MAH+VDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-17
Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          MA++VDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 3.9e-17
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          MA+++DHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.6e-17
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          MA++VDHEYDYLFK+VLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-16
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          M H+VD EYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. ExPASy TrEMBL
Match: A0A1S3CFW6 (ras-related protein Rab11C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500284 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.9e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDS 60
          MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDS
Sbjct: 1  MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDS 60

Query: 61 DVGKSNILSRFTRNEFCLESKSTIDLLG 89
          DVGKSNILSRFTRNEFCLESKSTIDLLG
Sbjct: 61 DVGKSNILSRFTRNEFCLESKSTIDLLG 88

[Close]

BLAST of IVF0013537 vs. ExPASy TrEMBL
Match: A0A1S3CFF6 (ras-related protein Rab11C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500284 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.2e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 6  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 65
          RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS
Sbjct: 7  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 66

Query: 66 NILSRFTRNEFCLESKSTIDLLG 89
          NILSRFTRNEFCLESKSTIDLLG
Sbjct: 67 NILSRFTRNEFCLESKSTIDLLG 89

[Close]

BLAST of IVF0013537 vs. ExPASy TrEMBL
Match: A0A5A7UGE0 (Ras-related protein Rab11C-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00340 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.2e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 6   RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 65
           RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS
Sbjct: 97  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 156

Query: 66  NILSRFTRNEFCLESKSTIDLLG 89
           NILSRFTRNEFCLESKSTIDLLG
Sbjct: 157 NILSRFTRNEFCLESKSTIDLLG 179

[Close]

BLAST of IVF0013537 vs. ExPASy TrEMBL
Match: A0A1S3BJ02 (ras-related protein Rab11C-like OS=Cucumis melo OX=3656 GN=LOC103490420 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.0e-37
Identity = 77/83 (92.77%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 6  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 65
          RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKS
Sbjct: 7  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKS 66

Query: 66 NILSRFTRNEFCLESKSTIDLLG 89
          NILSRFTRNEF LESKSTIDLLG
Sbjct: 67 NILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of IVF0013537 vs. ExPASy TrEMBL
Match: A0A5A7V4N4 (Ras-related protein Rab11C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001310 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.2e-22
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 30  LFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 89
           LFKKSR ETAMAHKVDHEYDYLFKIVLI D DVGKSNILSRFTRNEFCLESKS IDLLG
Sbjct: 106 LFKKSREETAMAHKVDHEYDYLFKIVLIEDFDVGKSNILSRFTRNEFCLESKSIIDLLG 164

[Close]

BLAST of IVF0013537 vs. NCBI nr
Match: XP_008461756.1 (PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo])

HSP 1 Score: 185 bits (470), Expect = 3.77e-59
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDS 60
          MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDS
Sbjct: 1  MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDS 60

Query: 61 DVGKSNILSRFTRNEFCLESKSTIDLLG 88
          DVGKSNILSRFTRNEFCLESKSTIDLLG
Sbjct: 61 DVGKSNILSRFTRNEFCLESKSTIDLLG 88

[Close]

BLAST of IVF0013537 vs. NCBI nr
Match: XP_008461753.1 (PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo] >XP_008461755.1 PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo])

HSP 1 Score: 175 bits (443), Expect = 5.14e-55
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 6  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 65
          RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS
Sbjct: 7  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 66

Query: 66 NILSRFTRNEFCLESKSTIDLLG 88
          NILSRFTRNEFCLESKSTIDLLG
Sbjct: 67 NILSRFTRNEFCLESKSTIDLLG 89

[Close]

BLAST of IVF0013537 vs. NCBI nr
Match: KAA0052805.1 (ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa] >TYK04163.1 ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (443), Expect = 8.79e-54
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 6   RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 65
           RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS
Sbjct: 97  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 156

Query: 66  NILSRFTRNEFCLESKSTIDLLG 88
           NILSRFTRNEFCLESKSTIDLLG
Sbjct: 157 NILSRFTRNEFCLESKSTIDLLG 179

[Close]

BLAST of IVF0013537 vs. NCBI nr
Match: XP_008448132.1 (PREDICTED: ras-related protein Rab11C-like [Cucumis melo])

HSP 1 Score: 162 bits (409), Expect = 7.92e-50
Identity = 78/87 (89.66%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2  IGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSD 61
          I + RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS 
Sbjct: 3  IYARRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSG 62

Query: 62 VGKSNILSRFTRNEFCLESKSTIDLLG 88
          VGKSNILSRFTRNEF LESKSTIDLLG
Sbjct: 63 VGKSNILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of IVF0013537 vs. NCBI nr
Match: TYK01106.1 (ras-related protein Rab11C-like [Cucumis melo var. makuwa])

HSP 1 Score: 110 bits (276), Expect = 1.51e-29
Identity = 55/60 (91.67%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 29 GLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 88
          GLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Sbjct: 30 GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of IVF0013537 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          MA+++DHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 87.0 bits (214), Expect = 8.0e-18
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          M H+VD EYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 84.7 bits (208), Expect = 4.0e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          MAH+V+ +YDYLFKIVLIGDS VGK+NILSRFTRNEFCLESKSTI
Sbjct: 1  MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 82.0 bits (201), Expect = 2.6e-16
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          MA + D EYDYLFK+VLIGDS VGKSN+LSRFTRNEFCLESKSTI
Sbjct: 1  MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTI 45

[Close]

BLAST of IVF0013537 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 77.4 bits (189), Expect = 6.3e-15
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 41 AHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 85
          A++ D EYDYLFK+VLIGDS VGKSN+LSRFTRNEF LESKSTI
Sbjct: 3  AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTI 46

The following BLAST results are available for this feature:

BLAST of IVF0013537 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40193	4.6e-18	95.56	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q39434	3.0e-17	93.33	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q9LNW1	3.9e-17	91.11	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]
Q40523	6.6e-17	91.11	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]
Q96283	1.1e-16	91.11	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]

BLAST of IVF0013537 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFW6	3.9e-44	100.00	ras-related protein Rab11C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035002...	[more]
A0A1S3CFF6	5.2e-41	100.00	ras-related protein Rab11C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035002...	[more]
A0A5A7UGE0	5.2e-41	100.00	Ras-related protein Rab11C-like isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BJ02	6.0e-37	92.77	ras-related protein Rab11C-like OS=Cucumis melo OX=3656 GN=LOC103490420 PE=4 SV=...	[more]
A0A5A7V4N4	9.2e-22	93.22	Ras-related protein Rab11C-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of IVF0013537 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461756.1	3.77e-59	100.00	PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo]	[more]
XP_008461753.1	5.14e-55	100.00	PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo] >XP_0084617...	[more]
KAA0052805.1	8.79e-54	100.00	ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa] >TYK04163....	[more]
XP_008448132.1	7.92e-50	89.66	PREDICTED: ras-related protein Rab11C-like [Cucumis melo]	[more]
TYK01106.1	1.51e-29	91.67	ras-related protein Rab11C-like [Cucumis melo var. makuwa]	[more]

BLAST of IVF0013537 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07410.1	2.8e-18	91.11	RAB GTPase homolog A2B	[more]
AT3G46830.1	8.0e-18	91.11	RAB GTPase homolog A2C	[more]
AT5G59150.1	4.0e-17	86.67	RAB GTPase homolog A2D	[more]
AT1G09630.1	2.6e-16	84.44	RAB GTPase 11C	[more]
AT5G60860.1	6.3e-15	81.82	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 53..84 e-value: 9.8E-8 score: 31.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 42..86 e-value: 7.5E-11 score: 43.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 47..85
None	No IPR available	PANTHER	PTHR47979:SF63	RAS-RELATED PROTEIN RAB11C	coord: 40..84
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 40..84
None	No IPR available	PROSITE	PS51419	RAB	coord: 47..88 score: 9.138267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013537.1	IVF0013537.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006825	copper ion transport
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004672	protein kinase activity