IVF0013495 (gene) Melon (IVF77) v1

Overview


Name	IVF0013495
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Histone H2A
Location	chr11: 18657812 .. 18658628 (-)
RNA-Seq Expression	IVF0013495
Synteny	IVF0013495

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCCGTCTCTCACTCAATCACAACTCCGATAACTCCCCGTCGACTAAAAGCTTCATTCTCTTCAACGTAAAACACCTAATCAGTGTCCAATGGAAACTGGCGGCAAGGCAAAGAAAGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAGGCAGTTTCTCGCTCCGTCAAAGCCGGTCTACAGTTCCCCGTCGGCCGTATAGCTCGTTATCTGAAGAAAGGAAGATACGCTCAGCGTGTCGGTACCGGCGCTCCCGTCTACTTAGCCGCAGTAATGGAGTATTTAGCCGCTGAGGTAACCAGATCGTCTTTTTTTTTTTTTTTTTCCTCCATTTCTTCCTCATCCTTCTCTGTCGAATCGCCATTGTGTTGATCTTAGATATTTCGATTTACAGGTTCTCGAGTTGGCTGGAAATGCGGCTAGAGACAACAAGAAGAACAGGATCATTCCAAGACACGTTCTATTGGCGATTAGGAACGACGAGGAACTTGGAAAGTTGCTCGCCGGCGTAACTATTGCTAGCGGTGGTGTTCTTCCGAATATCAATCCGGTTTTGTTGCCGAAGAAGACAGATAAGGGTACGAAAGAACCGAAATCGCCATCAAAGGCCGGAAAATCTCCATCGAAGGCGGCTTAAAGGGTGGAATTATAGAGTTAGGGTTGGATGAATGTTGTAATTTATGATGGTATGTTGGATTTGTTCTTCAATGGTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTGTAAGTGTAGACGAAGAAGAATTAGGTATTTGGGAATGCAATACTGTATTCGATATTTACAAGCGAGG

mRNA sequence

AAACCCGTCTCTCACTCAATCACAACTCCGATAACTCCCCGTCGACTAAAAGCTTCATTCTCTTCAACGTAAAACACCTAATCAGTGTCCAATGGAAACTGGCGGCAAGGCAAAGAAAGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAGGCAGTTTCTCGCTCCGTCAAAGCCGGTCTACAGTTCCCCGTCGGCCGTATAGCTCGTTATCTGAAGAAAGGAAGATACGCTCAGCGTGTCGGTACCGGCGCTCCCGTCTACTTAGCCGCAGTAATGGAGTATTTAGCCGCTGAGGTTCTCGAGTTGGCTGGAAATGCGGCTAGAGACAACAAGAAGAACAGGATCATTCCAAGACACGTTCTATTGGCGATTAGGAACGACGAGGAACTTGGAAAGTTGCTCGCCGGCGTAACTATTGCTAGCGGTGGTGTTCTTCCGAATATCAATCCGGTTTTGTTGCCGAAGAAGACAGATAAGGGTACGAAAGAACCGAAATCGCCATCAAAGGCCGGAAAATCTCCATCGAAGGCGGCTTAAAGGGTGGAATTATAGAGTTAGGGTTGGATGAATGTTGTAATTTATGATGGTATGTTGGATTTGTTCTTCAATGGTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTGTAAGTGTAGACGAAGAAGAATTAGGTATTTGGGAATGCAATACTGTATTCGATATTTACAAGCGAGG

Coding sequence (CDS)

ATGGAAACTGGCGGCAAGGCAAAGAAAGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAGGCAGTTTCTCGCTCCGTCAAAGCCGGTCTACAGTTCCCCGTCGGCCGTATAGCTCGTTATCTGAAGAAAGGAAGATACGCTCAGCGTGTCGGTACCGGCGCTCCCGTCTACTTAGCCGCAGTAATGGAGTATTTAGCCGCTGAGGTTCTCGAGTTGGCTGGAAATGCGGCTAGAGACAACAAGAAGAACAGGATCATTCCAAGACACGTTCTATTGGCGATTAGGAACGACGAGGAACTTGGAAAGTTGCTCGCCGGCGTAACTATTGCTAGCGGTGGTGTTCTTCCGAATATCAATCCGGTTTTGTTGCCGAAGAAGACAGATAAGGGTACGAAAGAACCGAAATCGCCATCAAAGGCCGGAAAATCTCCATCGAAGGCGGCTTAA

Protein sequence

METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLAAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNINPVLLPKKTDKGTKEPKSPSKAGKSPSKAA

Homology

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BLAST of IVF0013495 vs. ExPASy Swiss-Prot
Match: P19177 (Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.7e-63
Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           MET GKAKKG GGR+GG +KK+V+RSVKAGLQFPVGRI RYLKKGRYAQRVGTGAPVYLA
Sbjct: 1   METAGKAKKGFGGRKGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AV+EYLAAEVLELAGNAARDNKK RIIPRH+LLA+RNDEELGKLLAGVT A GGVLPNIN
Sbjct: 61  AVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNIN 120

Query: 121 PVLLPKKT-DKGTKEPKSPSKAGKSPSKA 149
           PVLLPKKT +K  KEPKSPSKAGKSP KA
Sbjct: 121 PVLLPKKTAEKAAKEPKSPSKAGKSPKKA 149

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BLAST of IVF0013495 vs. ExPASy Swiss-Prot
Match: Q9M531 (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.7e-60
Identity = 129/153 (84.31%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   METGGKAKKGAGGRR-GGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYL 60
           M+TG K KKGAG R+ GG KKK VSRSVKAGLQFPVGRI R+LKKGRYAQRVG+GAPVYL
Sbjct: 1   MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYL 60

Query: 61  AAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNI 120
           AAV+EYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIA GGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKTDK----GTKEPKSPSKAGKSPSKA 149
           NPVLLPKK +K     TKEPKSP+KA KSP KA
Sbjct: 121 NPVLLPKKAEKAAAAATKEPKSPAKATKSPKKA 153

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BLAST of IVF0013495 vs. ExPASy Swiss-Prot
Match: Q2HU68 (Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.2e-60
Identity = 122/148 (82.43%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           M+   K KKGAGGR+GG +KK+V+RS +AGLQFPVGRI RYLKKGRYAQRVGTGAPVYLA
Sbjct: 1   MDASTKTKKGAGGRKGGPRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AV+EYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIA GGVLPNIN
Sbjct: 61  AVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKA 149
           P+LLPKK +K     KSPSKA KSP KA
Sbjct: 121 PILLPKKNEKAATTTKSPSKATKSPKKA 148

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BLAST of IVF0013495 vs. ExPASy Swiss-Prot
Match: Q2HU65 (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.3e-59
Identity = 126/153 (82.35%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   METGGKAKKGAGGRR-GGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYL 60
           M+   K KKGAGGR+ GG +KK+V+RS++AGLQFPVGRI RYLKKGRYAQRVGTGAPVYL
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNI 120
           AAV+EYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIA GGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKTDKG---TKEPKSPS-KAGKSPSKA 149
           NPVLLPKKT++    +KEPKSP  KAGKSP KA
Sbjct: 121 NPVLLPKKTERSNTVSKEPKSPKPKAGKSPKKA 153

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BLAST of IVF0013495 vs. ExPASy Swiss-Prot
Match: A2WQG7 (Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.5e-58
Identity = 129/151 (85.43%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 4   GGKAKKGAGGRR-GGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLAAV 63
           GGK KKGA GR+ GG +KKAVSRSVKAGLQFPVGRI RYLKKGRYAQR+GTGAPVYLAAV
Sbjct: 9   GGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAV 68

Query: 64  MEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNINPV 123
           +EYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIA GGVLPNINPV
Sbjct: 69  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 128

Query: 124 LLPKKTDK----GTKEPKSPSK-AGKSPSKA 149
           LLPKKT +      KE KSP K AGKSP KA
Sbjct: 129 LLPKKTAEKAAAAGKEAKSPKKAAGKSPKKA 159

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BLAST of IVF0013495 vs. ExPASy TrEMBL
Match: A0A1S3BK65 (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103490586 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.8e-71
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA
Sbjct: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 150
           PVLLPKKTDKGTKEPKSPSKAGKSPSKAA
Sbjct: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 149

[Close]

BLAST of IVF0013495 vs. ExPASy TrEMBL
Match: A0A6J1FUE6 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111448508 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.5e-68
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           ME  GKAKKGAGGRRGGEKKK+VSRSVKAGLQFPVGRIARYLKKGRY+QRVGTGAPVYLA
Sbjct: 1   MEASGKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 150
           PVLLPKKTDK  KEPKSPSKAGKSPSKAA
Sbjct: 121 PVLLPKKTDKALKEPKSPSKAGKSPSKAA 149

[Close]

BLAST of IVF0013495 vs. ExPASy TrEMBL
Match: A0A6J1J904 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111484538 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           ME  GKAKKGAGGRRGGEKKK+VSRSVKAGLQFPVGRIARYLKKGRY+QRVGTGAPVYLA
Sbjct: 1   MEASGKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 150
           PVLLPKKTDK  KEPKSPSKAGKSPSK A
Sbjct: 121 PVLLPKKTDKALKEPKSPSKAGKSPSKVA 149

[Close]

BLAST of IVF0013495 vs. ExPASy TrEMBL
Match: A0A6J1L1N2 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111499596 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           ME   KAKKGAGGRRGGEKKK+VSRSVKAGLQFPVGRIARYLKKGRY+QRVGTGAPVYLA
Sbjct: 1   MEASAKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 150
           P+LLPKKTDK  KEPKSPSK GKSPSK++
Sbjct: 121 PILLPKKTDKAVKEPKSPSKGGKSPSKSS 149

[Close]

BLAST of IVF0013495 vs. ExPASy TrEMBL
Match: A0A6J1G6M6 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111451351 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           ME   KAKKGAGGRRGGEKKK+VSRSVKAGLQFPVGRIARYLKKGRY+QRVGTGAPVYLA
Sbjct: 1   MEVSAKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 150
           P+LLPKKTDK  KEPKSPSK GKSPSK++
Sbjct: 121 PILLPKKTDKAVKEPKSPSKGGKSPSKSS 149

[Close]

BLAST of IVF0013495 vs. NCBI nr
Match: XP_008448380.1 (PREDICTED: histone H2A [Cucumis melo])

HSP 1 Score: 278 bits (711), Expect = 5.91e-94
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA
Sbjct: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 149
           PVLLPKKTDKGTKEPKSPSKAGKSPSKAA
Sbjct: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 149

[Close]

BLAST of IVF0013495 vs. NCBI nr
Match: XP_022943937.1 (histone H2A [Cucurbita moschata] >XP_023512023.1 histone H2A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267 bits (682), Expect = 1.56e-89
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           ME  GKAKKGAGGRRGGEKKK+VSRSVKAGLQFPVGRIARYLKKGRY+QRVGTGAPVYLA
Sbjct: 1   MEASGKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 149
           PVLLPKKTDK  KEPKSPSKAGKSPSKAA
Sbjct: 121 PVLLPKKTDKALKEPKSPSKAGKSPSKAA 149

[Close]

BLAST of IVF0013495 vs. NCBI nr
Match: XP_022986957.1 (histone H2A [Cucurbita maxima])

HSP 1 Score: 265 bits (678), Expect = 6.36e-89
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           ME  GKAKKGAGGRRGGEKKK+VSRSVKAGLQFPVGRIARYLKKGRY+QRVGTGAPVYLA
Sbjct: 1   MEASGKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 149
           PVLLPKKTDK  KEPKSPSKAGKSPSK A
Sbjct: 121 PVLLPKKTDKALKEPKSPSKAGKSPSKVA 149

[Close]

BLAST of IVF0013495 vs. NCBI nr
Match: XP_038900828.1 (histone H2A-like [Benincasa hispida])

HSP 1 Score: 265 bits (676), Expect = 1.28e-88
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           METGGKAKKGAGGRRGGEKKK+VSRSV+AGLQFPVGRIARYLK GRYA+RVGTGAPVYLA
Sbjct: 1   METGGKAKKGAGGRRGGEKKKSVSRSVRAGLQFPVGRIARYLKHGRYARRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNK+NRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKRNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 149
           PVLLPKKTDK TKEPKSPSK  KSPSKAA
Sbjct: 121 PVLLPKKTDKATKEPKSPSKGAKSPSKAA 149

[Close]

BLAST of IVF0013495 vs. NCBI nr
Match: XP_023006960.1 (histone H2A-like [Cucurbita maxima])

HSP 1 Score: 261 bits (666), Expect = 4.29e-87
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   METGGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLA 60
           ME   KAKKGAGGRRGGEKKK+VSRSVKAGLQFPVGRIARYLKKGRY+QRVGTGAPVYLA
Sbjct: 1   MEASAKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLA 60

Query: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 121 PVLLPKKTDKGTKEPKSPSKAGKSPSKAA 149
           P+LLPKKTDK  KEPKSPSK GKSPSK++
Sbjct: 121 PILLPKKTDKAVKEPKSPSKGGKSPSKSS 149

[Close]

BLAST of IVF0013495 vs. TAIR 10
Match: AT5G02560.1 (histone H2A 12 )

HSP 1 Score: 224.9 bits (572), Expect = 4.2e-59
Identity = 124/153 (81.05%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 1   METGGKAKKGAGGRR--GGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVY 60
           M++G K KKGA GRR  GG KKK VSRSVK+GLQFPVGRI RYLKKGRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPN 120
           LAAV+EYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELG LL GVTIA GGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120

Query: 121 INPVLLPKKTDKG---TKEPKSPSKAGKSPSKA 149
           INP+LLPKK++K    TK PKSPSKA KSP K+
Sbjct: 121 INPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153

[Close]

BLAST of IVF0013495 vs. TAIR 10
Match: AT5G02560.2 (histone H2A 12 )

HSP 1 Score: 211.5 bits (537), Expect = 4.8e-55
Identity = 124/177 (70.06%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 1   METGGKAKKGAGGRR--GGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVY 60
           M++G K KKGA GRR  GG KKK VSRSVK+GLQFPVGRI RYLKKGRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVMEYLAAE------------------------VLELAGNAARDNKKNRIIPRHVLLA 120
           LAAV+EYLAAE                        VLELAGNAARDNKKNRIIPRHVLLA
Sbjct: 61  LAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLA 120

Query: 121 IRNDEELGKLLAGVTIASGGVLPNINPVLLPKKTDKG---TKEPKSPSKAGKSPSKA 149
           +RNDEELG LL GVTIA GGVLPNINP+LLPKK++K    TK PKSPSKA KSP K+
Sbjct: 121 VRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 177

[Close]

BLAST of IVF0013495 vs. TAIR 10
Match: AT5G27670.1 (histone H2A 7 )

HSP 1 Score: 205.3 bits (521), Expect = 3.4e-53
Identity = 112/143 (78.32%), Postives = 126/143 (88.11%), Query Frame = 0


Query: 6   KAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLAAVMEY 65
           K  +GAGGR+GG++KK+VS+SVKAGLQFPVGRIARYLKKGRYA R G+GAPVYLAAV+EY
Sbjct: 9   KPTRGAGGRKGGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEY 68

Query: 66  LAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNINPVLLP 125
           LAAEVLELAGNAARDNKKNRI PRH+ LAIRNDEELG+LL GVTIASGGVLPNINPVLLP
Sbjct: 69  LAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 128

Query: 126 KKTDKGTKEPKSPSKAGKSPSKA 149
           KK+   + + +  S A KSP KA
Sbjct: 129 KKSTASSSQAEKAS-ATKSPKKA 150

[Close]

BLAST of IVF0013495 vs. TAIR 10
Match: AT5G59870.1 (histone H2A 6 )

HSP 1 Score: 198.4 bits (503), Expect = 4.2e-51
Identity = 111/150 (74.00%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 1   METGGKAKKGAGGRR--GGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVY 60
           ME+ GK KK  GGR+  G  K K+VS+S+KAGLQFPVGRI R+LKKGRYAQR+G GAPVY
Sbjct: 1   MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVY 60

Query: 61  LAAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPN 120
           +AAV+EYLAAEVLELAGNAARDNKK+RIIPRH+LLAIRNDEELGKLL+GVTIA GGVLPN
Sbjct: 61  MAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPN 120

Query: 121 INPVLLPKKTDKGTKEPKSPSKAGKSPSKA 149
           IN VLLPKK+     E K+     KSP KA
Sbjct: 121 INSVLLPKKSATKPAEEKATKSPVKSPKKA 150

[Close]

BLAST of IVF0013495 vs. TAIR 10
Match: AT1G51060.1 (histone H2A 10 )

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44
Identity = 91/121 (75.21%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 17  GEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLAAVMEYLAAEVLELAGN 76
           G  KKA +RS KAGLQFPVGRIAR+LKKG+YA+RVG GAPVYLAAV+EYLAAEVLELAGN
Sbjct: 11  GSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGN 70

Query: 77  AARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNINPVLLPKKTDKGTKEPK 136
           AARDNKK RI+PRH+ LA+RNDEEL KLL  VTIA+GGV+PNI+ +LLPKKT  G  +P 
Sbjct: 71  AARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT--GASKPS 129

Query: 137 S 138
           +
Sbjct: 131 A 129

The following BLAST results are available for this feature:

BLAST of IVF0013495 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19177	2.7e-63	87.25	Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1	[more]
Q9M531	3.7e-60	84.31	Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
Q2HU68	8.2e-60	82.43	Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 P...	[more]
Q2HU65	5.3e-59	82.35	Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 P...	[more]
A2WQG7	4.5e-58	85.43	Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3...	[more]

BLAST of IVF0013495 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BK65	2.8e-71	100.00	Histone H2A OS=Cucumis melo OX=3656 GN=LOC103490586 PE=3 SV=1	[more]
A0A6J1FUE6	6.5e-68	95.97	Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111448508 PE=3 SV=1	[more]
A0A6J1J904	1.9e-67	95.30	Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111484538 PE=3 SV=1	[more]
A0A6J1L1N2	4.6e-66	92.62	Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111499596 PE=3 SV=1	[more]
A0A6J1G6M6	4.6e-66	92.62	Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111451351 PE=3 SV=1	[more]

BLAST of IVF0013495 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448380.1	5.91e-94	100.00	PREDICTED: histone H2A [Cucumis melo]	[more]
XP_022943937.1	1.56e-89	95.97	histone H2A [Cucurbita moschata] >XP_023512023.1 histone H2A [Cucurbita pepo sub...	[more]
XP_022986957.1	6.36e-89	95.30	histone H2A [Cucurbita maxima]	[more]
XP_038900828.1	1.28e-88	94.63	histone H2A-like [Benincasa hispida]	[more]
XP_023006960.1	4.29e-87	92.62	histone H2A-like [Cucurbita maxima]	[more]

BLAST of IVF0013495 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02560.1	4.2e-59	81.05	histone H2A 12	[more]
AT5G02560.2	4.8e-55	70.06	histone H2A 12	[more]
AT5G27670.1	3.4e-53	78.32	histone H2A 7	[more]
AT5G59870.1	4.2e-51	74.00	histone H2A 6	[more]
AT1G51060.1	1.0e-44	75.21	histone H2A 10	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 50..65 score: 81.37 coord: 65..78 score: 89.46 coord: 21..43 score: 71.22 coord: 79..93 score: 73.78 coord: 107..125 score: 76.19
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 10..130 e-value: 2.0E-79 score: 279.9
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 19..127 e-value: 3.77178E-67 score: 197.558
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 99..133 e-value: 8.3E-19 score: 67.1
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 16..96 e-value: 1.1E-13 score: 51.7
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 6..137 e-value: 2.1E-64 score: 217.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 24..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..149
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 8..143
None	No IPR available	PANTHER	PTHR23430:SF304	HISTONE H2A	coord: 8..143
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 29..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013495.1	IVF0013495.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0000792	heterochromatin
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity