IVF0013455 (gene) Melon (IVF77) v1

Overview


Name	IVF0013455
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag-pro-like protein
Location	chr10: 19367113 .. 19367460 (+)
RNA-Seq Expression	IVF0013455
Synteny	IVF0013455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCAAACCAACGATCAGATTCAAGCAGTCCGTCAAGACGTTGAAGGTTTGAAAGATCAATTGGCAAAAATCCTAGAATCGCTCACCACAGGAAGAGGAAAGAGTGTTACGGGGACTTCATCACAAGTGGAAGTGGATCTGAATGAGGTACTAGAGGACATGCCTGCATACCCTCCGGGTTTCACTCCTCAAAGGTCGTCTGGTCCATGTATGATGGATAGGACATATCCTACATCCTTTCCCGCACCAAATCCTAGCACAACCACTAAACTGGCAGTCCATGTGAGCGATTCCATATCTACTCCAGTTACGGAAAGTGATAAGAAAATTTTAGAAGAGTAG

mRNA sequence

ATGGATGAGCAAACCAACGATCAGATTCAAGCAGTCCGTCAAGACGTTGAAGGTTTGAAAGATCAATTGGCAAAAATCCTAGAATCGCTCACCACAGGAAGAGGAAAGAGTGTTACGGGGACTTCATCACAAGTGGAAGTGGATCTGAATGAGGTACTAGAGGACATGCCTGCATACCCTCCGGGTTTCACTCCTCAAAGGTCGTCTGGTCCATGTATGATGGATAGGACATATCCTACATCCTTTCCCGCACCAAATCCTAGCACAACCACTAAACTGGCAGTCCATGTGAGCGATTCCATATCTACTCCAGTTACGGAAAGTGATAAGAAAATTTTAGAAGAGTAG

Coding sequence (CDS)

ATGGATGAGCAAACCAACGATCAGATTCAAGCAGTCCGTCAAGACGTTGAAGGTTTGAAAGATCAATTGGCAAAAATCCTAGAATCGCTCACCACAGGAAGAGGAAAGAGTGTTACGGGGACTTCATCACAAGTGGAAGTGGATCTGAATGAGGTACTAGAGGACATGCCTGCATACCCTCCGGGTTTCACTCCTCAAAGGTCGTCTGGTCCATGTATGATGGATAGGACATATCCTACATCCTTTCCCGCACCAAATCCTAGCACAACCACTAAACTGGCAGTCCATGTGAGCGATTCCATATCTACTCCAGTTACGGAAAGTGATAAGAAAATTTTAGAAGAGTAG

Protein sequence

MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYPPGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE

Homology

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BLAST of IVF0013455 vs. ExPASy TrEMBL
Match: A0A5A7UPX8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003010 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.9e-55
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP
Sbjct: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 116
           PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE
Sbjct: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 115

[Close]

BLAST of IVF0013455 vs. ExPASy TrEMBL
Match: A0A5A7V1Y8 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00010 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.3e-43
Identity = 95/115 (82.61%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQ+QAVRQDVEGLKDQLAKILE LTTGRGKSV GTSSQVEVDLN+VLED+ AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 116
           P FTPQR S P M+DRTYPTSFPAPNP+TTT+ A HVSD ISTP+T+S KKI EE
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEE 115

[Close]

BLAST of IVF0013455 vs. ExPASy TrEMBL
Match: A0A1S3BTL0 (uncharacterized protein LOC103493407 OS=Cucumis melo OX=3656 GN=LOC103493407 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.3e-43
Identity = 95/115 (82.61%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQ+QAVRQDVEGLKDQLAKILE LTTGRGKSV GTSSQVEVDLN+VLED+ AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 116
           P FTPQR S P M+DRTYPTSFPAPNP+TTT+ A HVSD ISTP+T+S KKI EE
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEE 115

[Close]

BLAST of IVF0013455 vs. ExPASy TrEMBL
Match: A0A5A7TXF2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001530 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.5e-43
Identity = 94/115 (81.74%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQ+QAVRQDVEGLKDQLAKILE LTTGRGKSV GTSSQVEVDLN+VLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 116
           PGFTPQRSS P M D TYPTSFPAPNP+TTT+ A H ++ ISTP+ E  KKI EE
Sbjct: 61  PGFTPQRSSSPRMGDITYPTSFPAPNPNTTTQQAAHANNPISTPIMEGSKKISEE 115

[Close]

BLAST of IVF0013455 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.2e-42
Identity = 93/115 (80.87%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQ+QAVRQDVEGLKDQLAKILE LTTGRGKSV GTSSQVEVDLN+VLEDMP YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 116
           PGFTPQRSS P M DRTYPTSFPAPNP+TTT+ A H ++ IST + E  KKI EE
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEE 115

[Close]

BLAST of IVF0013455 vs. NCBI nr
Match: KAA0056366.1 (uncharacterized protein E6C27_scaffold186G001020 [Cucumis melo var. makuwa] >TYK29149.1 uncharacterized protein E5676_scaffold120G003010 [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (560), Expect = 5.04e-72
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP
Sbjct: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 115
           PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE
Sbjct: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 115

[Close]

BLAST of IVF0013455 vs. NCBI nr
Match: KAA0046607.1 (Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 179 bits (454), Expect = 2.81e-54
Identity = 94/115 (81.74%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQ+QAVRQDVEGLKDQLAKILE LTTGRGKSV GTSSQVEVDLN+VLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 115
           PGFTPQRSS P M D TYPTSFPAPNP+TTT+ A H ++ ISTP+ E  KKI EE
Sbjct: 61  PGFTPQRSSSPRMGDITYPTSFPAPNPNTTTQQAAHANNPISTPIMEGSKKISEE 115

[Close]

BLAST of IVF0013455 vs. NCBI nr
Match: XP_008452348.1 (PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag-pro-like protein [Cucumis melo var. makuwa] >TYK00746.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 180 bits (457), Expect = 2.53e-53
Identity = 95/115 (82.61%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQ+QAVRQDVEGLKDQLAKILE LTTGRGKSV GTSSQVEVDLN+VLED+ AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 115
           P FTPQR S P M+DRTYPTSFPAPNP+TTT+ A HVSD ISTP+T+S KKI EE
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEE 115

[Close]

BLAST of IVF0013455 vs. NCBI nr
Match: TYK15864.1 (Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 164 bits (415), Expect = 1.56e-48
Identity = 87/108 (80.56%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQ+QAV QDVEGLKDQLAKILE LTTGRGKSV G SSQVEVDLN+VLEDMP YP
Sbjct: 1   MDEQTNDQVQAVCQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPVYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTES 108
           PGF PQRSS P M+DRTYPTSFPA NP+ TT+ A H SD IST +TES
Sbjct: 61  PGFIPQRSSSPRMVDRTYPTSFPAQNPNPTTQQADHASDPISTSITES 108

[Close]

BLAST of IVF0013455 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 176 bits (447), Expect = 1.62e-48
Identity = 93/115 (80.87%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MDEQTNDQIQAVRQDVEGLKDQLAKILESLTTGRGKSVTGTSSQVEVDLNEVLEDMPAYP 60
           MDEQTNDQ+QAVRQDVEGLKDQLAKILE LTTGRGKSV GTSSQVEVDLN+VLEDMP YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPQRSSGPCMMDRTYPTSFPAPNPSTTTKLAVHVSDSISTPVTESDKKILEE 115
           PGFTPQRSS P M DRTYPTSFPAPNP+TTT+ A H ++ IST + E  KKI EE
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEE 115

The following BLAST results are available for this feature:

BLAST of IVF0013455 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0013455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UPX8	4.9e-55	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V1Y8	4.3e-43	82.61	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420...	[more]
A0A1S3BTL0	4.3e-43	82.61	uncharacterized protein LOC103493407 OS=Cucumis melo OX=3656 GN=LOC103493407 PE=...	[more]
A0A5A7TXF2	9.5e-43	81.74	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114...	[more]
A0A5A7VAU5	6.2e-42	80.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0013455 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056366.1	5.04e-72	100.00	uncharacterized protein E6C27_scaffold186G001020 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0046607.1	2.81e-54	81.74	Gag-pro-like protein [Cucumis melo var. makuwa]	[more]
XP_008452348.1	2.53e-53	82.61	PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag...	[more]
TYK15864.1	1.56e-48	80.56	Gag-pro-like protein [Cucumis melo var. makuwa]	[more]
KAA0065293.1	1.62e-48	80.87	uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0013455 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013455.1	IVF0013455.1	mRNA