IVF0013436 (gene) Melon (IVF77) v1

Overview
NameIVF0013436
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTryptophan synthase beta chain 1
Locationchr12: 22146504 .. 22149041 (+)
RNA-Seq ExpressionIVF0013436
SyntenyIVF0013436
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGCATTAACGTTGTTATGGTGAACAATGCTGCAGTGACCAACCATGTAGTTGCGGCCACAGGCATATGGAGATCAACCCATGTAGAGCTTGGGAAAGGAATTGGGTTAGACACTTTTGGAGGACAAAGAGGAATATGAGACAATAAAGATGCAAGTATTAGGAAATTCTGGGAATTCCGATGGGAAGCTGCGGCAGGATTCTGAAATCCTTCATACCTTAGCTAAAGTGGAGATGACGAATTTGACTTTCTTTACACCGACAAATTCCAGGTCCATGATATTACAATTTTGTTATTGTTTCTTTTGACATTAAAGTATACCAATAGGTTAAAATAACGTCTTCTTACTTTGAGGTTGCTTTCAATTTTAGTTTTTCATATACTTTCAATTGTACTATTTTTTTTTATACTTTTAATTAATTTTGAAGTTTGCTAATTAATTTTATTTATTTTAAATTTGTTGGGTTATATATACATTTTTACTATAAATTTTGAAAATATATTTATCAAGGGATGGTTTCATAAATAGCAATCAACTATAAAGCATTTGTAAGAATAAGATACAAAATAATTATGTAAATATGGCGACATTAATCAATTTTCGAAGTCCATAAGTATAGGTCATACTTTAGAGTTTGTTTCTAATAAAAGTCTATTACTAAAAAAAAATTTTATATTGGTAATTTTTTTAAAAAAGTTCTACGCATTAATTATAAGTCCTAAAAGTATTATCCATTGTAATTATCACTCTATTGTTTAATTGATTTTGATAAAAAAAAAATAATTATGACAGAATTATCAATTTATATGAAACTAAAATTGAACCGGAGATAATTATAGTTGGTAGCAATTTTAGAGATAACAATCAAATGTAAAACAACATTTATAGAAAATGCAAATATATATAGCAAGTCTATGAGACTATTAATAATAGATTTTTATATTTTTATAGTTCATCAATGATGGATTAATATTTAAAATATGATCTATCATCTATCTTTATTACTCACGTACAATCCAACAAATCAATTTATGTTATATTTGTAAAAAAAAATTTAAAAAAGTTGCTATATATGTTGATACGTTTAATCTAATTGGTATGATATTACCGTGGTTCGAACAAACTTAAGAAAATCAAAATGGTATTTTAATGATTTGGCATATTGCAGGAGGAGGTGGTGGAGGAGATGAGGGTTTTTGCTGGGCGAGAGATGGAGGTGTGTTATGCGGAGAGACTAACAAATCAGTACAGAAACGAAGAGGGAAGGGGTCCTGAAATTTACATAAAAAGAGATGGAGATGTGATCAACCCGTTTCGTGACCACAAGATCATTAGCAGTGTCATCATAAAGGTTATGGCCGCGAAGCGCATGGGAAAGAGCGTGATTGCGGCCACTGGGGGCGGCCAAGGCCAGCAGTACGGGATTATCACTGCAGCTGCTTGCCACAGACATGGTTTAGATTGCACCATTTTCATGGGATCTGAAGATCATATCAATAAGCGTCTTCAAATGTGCAGTTAATCACTTCGTTAGGTGCTCAGTACATATAATTAGACATTTTAGTGAACTACATAACAACAGGTACAATCTAAGATGCATCAAAAATATATTTTTTTTGGTACGAATACAAAATGTGGGTTAGATTATTAATATTTGGTTAAGTGAGAATCAGGTGAAATGGGTAGAGGGAAACTTGAACAAGCAGTATTGAGGCAAAAAAAAGAGTTGATAAGGAAGTCGAAAACAGCCTTCTTGTGGTAGTTAGGGATGAAGAGACCAACCAATTTCAAGAGACGAAGAAACAAGGCATGGACACATTGAACAGCACAGCAGATGTCCTAATTTTGGGCTGCATTGAGTGTACTGCCTCAAATGTTTTGAAACTCTTCCTTGACCATTTCATCCAAAAGATAAGGATGTGAGGTGATCCTAGTCCAGCCTTATAATGGAATAATGCACACTGACCCCAAATTATGCTACCTCATTCTATAGGTGAAGGGTAAGTAAAATACCATTTCTTGAACTACTTTACTTAAATTCACTCGAGCCCTGCTCAAATGTTGCCTCATACTCCCCCATCCACTGCACATAAAAAATAACTTGTCAGTTTAATTGAGTGAAGTATAGAAGGCTGCACAATAGATGAGTTAGACTACTCGAGGTACACCCAAGTTTTTTTCTTAGTTATATTGCAATCATATGTTAGCTATTACACATATATCAATACTACTGAACTAATAGGACTATTAATTTATTTATTTGAATGGTATATATTGAAATGAATGCCCACAGGCTAGAATCCCAAGAGAAAAAGGGTTAAAGTACTTGAACTTCTGAAGGAGATGGGGAAAGTTGAATTTTACACAGTGACTGATATGGAGGTGAGGGAAGCTCGCAATCTGTATTTTAAGTTGGAAGGCATTTTTCCATCGAAGGAGGCTTCTTATGCTTTTGCATATCTTCACAAGCTTTGCCCCACTCTGTCTGATGGCTGCAAGGTGGTCGTCCATTGCAGTGGCCAATCGTGGTGA

mRNA sequence

ATGGCATGCATTAACGTTGTTATGGTGAACAATGCTGCAGTGACCAACCATGTAGTTGCGGCCACAGGCATATGGAGATCAACCCATGTAGAGCTTGGGAAAGGAATTGGTGGAGATGACGAATTTGACTTTCTTTACACCGACAAATTCCAGGAGGAGGTGGTGGAGGAGATGAGGGTTTTTGCTGGGCGAGAGATGGAGGTGTGTTATGCGGAGAGACTAACAAATCAGTACAGAAACGAAGAGGGAAGGGGTCCTGAAATTTACATAAAAAGAGATGGAGATGTGATCAACCCGTTTCGTGACCACAAGATCATTAGCAGTGTCATCATAAAGGTTATGGCCGCGAAGCGCATGGGAAAGAGCGTGATTGCGGCCACTGGGGGCGGCCAAGGCCAGCAGTACGGGATTATCACTGCAGCTGCTTGCCACAGACATGGTTTAGATTGCACCATTTTCATGGGATCTGAAGATCATATCAATAAGCGTCTTCAAATTATTGAGGCAAAAAAAAGAGTTGATAAGGAAGTCGAAAACAGCCTTCTTGTGGTAGTTAGGGATGAAGAGACCAACCAATTTCAAGAGACGAAGAAACAAGGCATGGACACATTGAACAGCACAGCAGATGTCCTAATTTTGGGCTGCATTGAGTGTACTGCCTCAAATGTTTTGAAACTCTTCCTTGACCATTTCATCCAAAAGATAAGGATAAAAAGGGTTAAAGTACTTGAACTTCTGAAGGAGATGGGGAAAGTTGAATTTTACACAGTGACTGATATGGAGGTGAGGGAAGCTCGCAATCTGTATTTTAAGTTGGAAGGCATTTTTCCATCGAAGGAGGCTTCTTATGCTTTTGCATATCTTCACAAGCTTTGCCCCACTCTGTCTGATGGCTGCAAGGTGGTCGTCCATTGCAGTGGCCAATCGTGGTGA

Coding sequence (CDS)

ATGGCATGCATTAACGTTGTTATGGTGAACAATGCTGCAGTGACCAACCATGTAGTTGCGGCCACAGGCATATGGAGATCAACCCATGTAGAGCTTGGGAAAGGAATTGGTGGAGATGACGAATTTGACTTTCTTTACACCGACAAATTCCAGGAGGAGGTGGTGGAGGAGATGAGGGTTTTTGCTGGGCGAGAGATGGAGGTGTGTTATGCGGAGAGACTAACAAATCAGTACAGAAACGAAGAGGGAAGGGGTCCTGAAATTTACATAAAAAGAGATGGAGATGTGATCAACCCGTTTCGTGACCACAAGATCATTAGCAGTGTCATCATAAAGGTTATGGCCGCGAAGCGCATGGGAAAGAGCGTGATTGCGGCCACTGGGGGCGGCCAAGGCCAGCAGTACGGGATTATCACTGCAGCTGCTTGCCACAGACATGGTTTAGATTGCACCATTTTCATGGGATCTGAAGATCATATCAATAAGCGTCTTCAAATTATTGAGGCAAAAAAAAGAGTTGATAAGGAAGTCGAAAACAGCCTTCTTGTGGTAGTTAGGGATGAAGAGACCAACCAATTTCAAGAGACGAAGAAACAAGGCATGGACACATTGAACAGCACAGCAGATGTCCTAATTTTGGGCTGCATTGAGTGTACTGCCTCAAATGTTTTGAAACTCTTCCTTGACCATTTCATCCAAAAGATAAGGATAAAAAGGGTTAAAGTACTTGAACTTCTGAAGGAGATGGGGAAAGTTGAATTTTACACAGTGACTGATATGGAGGTGAGGGAAGCTCGCAATCTGTATTTTAAGTTGGAAGGCATTTTTCCATCGAAGGAGGCTTCTTATGCTTTTGCATATCTTCACAAGCTTTGCCCCACTCTGTCTGATGGCTGCAAGGTGGTCGTCCATTGCAGTGGCCAATCGTGGTGA

Protein sequence

MACINVVMVNNAAVTNHVVAATGIWRSTHVELGKGIGGDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDHINKRLQIIEAKKRVDKEVENSLLVVVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQKIRIKRVKVLELLKEMGKVEFYTVTDMEVREARNLYFKLEGIFPSKEASYAFAYLHKLCPTLSDGCKVVVHCSGQSW
Homology
BLAST of IVF0013436 vs. ExPASy Swiss-Prot
Match: P14671 (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-28
Identity = 105/355 (29.58%), Postives = 164/355 (46.20%), Query Frame = 0

Query: 48  DKFQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINPFRDHKIIS 107
           D FQ E+   ++ + GRE  + +AERLT  YR E G GP IY+KR+   +N    HK I+
Sbjct: 111 DDFQRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKRED--LNHTGAHK-IN 170

Query: 108 SVIIKVMAAKRMGKS-VIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDHINK---- 167
           + + + + AKR+GK  +IA TG G   Q+G+ TA  C R GL+C I+MG++D   +    
Sbjct: 171 NAVAQALLAKRLGKKRIIAETGAG---QHGVATATVCARFGLECIIYMGAQDMERQALNV 230

Query: 168 -RLQIIEAKKR---------------------VDKEVENSLL----------VVVRDEET 227
            R++++ A+ R                      + E  + +L          ++VRD   
Sbjct: 231 FRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHA 290

Query: 228 NQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQKIRIKRV---------- 287
              +ET+KQ ++      DVL+  C+    SN + LF   F+    ++ +          
Sbjct: 291 VIGKETRKQALEKWGGKPDVLV-ACVG-GGSNAMGLF-HEFVNDTEVRMIGVEAAGFGLD 350

Query: 288 -----------------------------KVLE------------------LLKEMGKVE 309
                                        +++E                    K+MG+ E
Sbjct: 351 SGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAE 410

BLAST of IVF0013436 vs. ExPASy Swiss-Prot
Match: P43284 (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 GN=TSB2 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.5e-28
Identity = 106/355 (29.86%), Postives = 168/355 (47.32%), Query Frame = 0

Query: 48  DKFQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINPFRDHKIIS 107
           D+FQ+E+   ++ + GRE  + +AERLT  Y+  +G GP IY+KR+   +N    HK I+
Sbjct: 84  DEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKRED--LNHTGAHK-IN 143

Query: 108 SVIIKVMAAKRMGKS-VIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDHINK---- 167
           + + + + AKR+GK  +IA TG G   Q+G+ TA  C R GL C I+MG++D   +    
Sbjct: 144 NAVAQALLAKRLGKQRIIAETGAG---QHGVATATVCRRFGLQCIIYMGAQDMERQALNV 203

Query: 168 -RLQIIEAKKRV----DKEVENSLLVVVRDEETN----------------------QF-- 227
            R++++ A+ R        ++++    +RD  TN                      +F  
Sbjct: 204 FRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHK 263

Query: 228 ---QETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQKIRIKRV---------- 287
              +ET++Q MD      DVL+  C+    SN + LF   F++   ++ V          
Sbjct: 264 VIGKETRRQAMDKWGGKPDVLV-ACVG-GGSNAMGLF-HEFVEDQDVRLVGLEAAGHGVD 323

Query: 288 -----------------------------KVLE------------------LLKEMGKVE 309
                                        +V+E                   LK++G+ E
Sbjct: 324 TDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAE 383

BLAST of IVF0013436 vs. ExPASy Swiss-Prot
Match: P25269 (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB2 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.9e-28
Identity = 108/362 (29.83%), Postives = 168/362 (46.41%), Query Frame = 0

Query: 42  FDFLYTDK-FQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINPF 101
           F  L TD+ FQ E+ E ++ + GRE  + +AERLT  YR E G GP IY+KR+   +N  
Sbjct: 109 FYSLATDEDFQRELAEILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKRED--LNHT 168

Query: 102 RDHKIISSVIIKVMAAKRMGKS-VIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDH 161
             HK I++ + + + AKR+GK  +IA TG G   Q+G+ TA  C R GL C I+MG++D 
Sbjct: 169 GAHK-INNAVAQALLAKRLGKKRIIAETGAG---QHGVATATVCARFGLQCIIYMGAQDM 228

Query: 162 INK-----RLQIIEAKKR---------------------VDKEVENSLL----------V 221
             +     R++++ A+ R                      + E  + +L          +
Sbjct: 229 ERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPM 288

Query: 222 VVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQKIRIKRV--- 281
           +VRD      +ET+KQ M+      DVL+  C+    SN + LF   F+    ++ +   
Sbjct: 289 MVRDFHAVIGKETRKQAMEKWGGKPDVLV-ACVG-GGSNAMGLF-HEFVDDTEVRMIGVE 348

Query: 282 ------------------------------------KVLE------------------LL 309
                                               +++E                   L
Sbjct: 349 AAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFL 408

BLAST of IVF0013436 vs. ExPASy Swiss-Prot
Match: P43283 (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.2e-26
Identity = 106/355 (29.86%), Postives = 167/355 (47.04%), Query Frame = 0

Query: 48  DKFQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINPFRDHKIIS 107
           D+FQ+E+   ++ + GRE  + +AERLT  Y+  +G GP IY+KR+   +N    HK I+
Sbjct: 30  DEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKRED--LNHRGAHK-IN 89

Query: 108 SVIIKVMAAKRMGKS-VIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDHINK---- 167
           + + + + AKR+GK  +IA TG G   Q+G+ TA  C R GL C I+MG++D   +    
Sbjct: 90  NAVAQALLAKRLGKQRIIAETGAG---QHGVATATVCARFGLQCIIYMGAQDMERQALNV 149

Query: 168 -RLQIIEAKKRV----DKEVENSLLVVVRDEETN----------------------QF-- 227
            R++++ A+ R        ++++    +RD  TN                      +F  
Sbjct: 150 FRMKLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHK 209

Query: 228 ---QETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFI--QKIRIKRV-------- 287
              +ET++Q M       DVL+  C+    SN + LF   F+  Q +R+  V        
Sbjct: 210 VIGKETRRQAMHKWGGKPDVLV-ACVG-GGSNAMGLF-HEFVEDQDVRLIGVEAAGHGVD 269

Query: 288 -----------------------------KVLE------------------LLKEMGKVE 309
                                        +V+E                   LK++G+ E
Sbjct: 270 TDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAE 329

BLAST of IVF0013436 vs. ExPASy Swiss-Prot
Match: O50046 (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=16922 GN=TSB PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.5e-26
Identity = 105/352 (29.83%), Postives = 163/352 (46.31%), Query Frame = 0

Query: 50  FQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINPFRDHKIISSV 109
           FQ+E+   ++ + GRE  + +AERLT  Y+   G GPEIY+KR+   +N    HK I++ 
Sbjct: 109 FQKELDGILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKRED--LNHTGAHK-INNA 168

Query: 110 IIKVMAAKRMGKS-VIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDHINK-----R 169
           + + + AKR+GK  +IA TG G   Q+G+ TA  C R GL C I+MG++D   +     R
Sbjct: 169 VAQALLAKRLGKKRIIAETGAG---QHGVATATVCARFGLQCVIYMGAQDMERQALNVFR 228

Query: 170 LQIIEAKKRV----DKEVENSLLVVVRDEETN----------------------QF---- 229
           ++++ A+ R        ++++    +RD  TN                      +F    
Sbjct: 229 MRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVI 288

Query: 230 -QETKKQGMDTLNSTADVLILGCIECTASNVLKLFL----DHFIQKIRIK---------- 289
            +ET+KQ ++      DVL+  C+    SN + LF     D  ++ I ++          
Sbjct: 289 GKETRKQALEKWGGKPDVLV-ACVG-GGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGK 348

Query: 290 --------RVKVL----------------------------------ELLKEMGKVEFYT 309
                    V VL                                    LK++G+ E+Y 
Sbjct: 349 HAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYC 408

BLAST of IVF0013436 vs. ExPASy TrEMBL
Match: A0A5D3BJR8 (Tryptophan synthase beta chain 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005950 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.0e-144
Identity = 287/408 (70.34%), Postives = 296/408 (72.55%), Query Frame = 0

Query: 1   MACINVVMVNNAAVTNHVVAATGIWRSTHVELGKGIG----------------------- 60
           MACINVVMVNNAAVTNHVVAATGIWRS HVELGKGIG                       
Sbjct: 1   MACINVVMVNNAAVTNHVVAATGIWRSNHVELGKGIGLDTFWRTKRNMRTIKMQVLGNSG 60

Query: 61  -------------------GDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120
                               DDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY
Sbjct: 61  NSDGKLRQDSEILHTLAKVEDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120

Query: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180
           RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII
Sbjct: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180

Query: 181 TAAACHRHGLDCTIFMGSEDHINK----------------------RLQIIEAKKRVDKE 240
           TAAACHRHGLDCTIFMGSEDHINK                      +  ++EAKK + ++
Sbjct: 181 TAAACHRHGLDCTIFMGSEDHINKQSSNVQLITSLGAQVKWVEGNLKQAVLEAKKELIRK 240

Query: 241 VENSLLVVVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQK-- 300
            + SLLVVVRDEETNQFQETKKQG+DTLNSTADVLILGCIECTASNVLKLFLDHFIQK  
Sbjct: 241 SKTSLLVVVRDEETNQFQETKKQGIDTLNSTADVLILGCIECTASNVLKLFLDHFIQKDK 300

Query: 301 --------------------------------IRIKRVKVLELLKEMGKVEFYTVTDMEV 311
                                            R K +K L  LKEMGKVEFYTVTDMEV
Sbjct: 301 DVRLILVQPYNGIMHTAPQIMLPHSIGEGLESQREKGLKYLNFLKEMGKVEFYTVTDMEV 360

BLAST of IVF0013436 vs. ExPASy TrEMBL
Match: A0A1S3B3V8 (tryptophan synthase beta chain 1, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485486 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.0e-144
Identity = 287/408 (70.34%), Postives = 296/408 (72.55%), Query Frame = 0

Query: 1   MACINVVMVNNAAVTNHVVAATGIWRSTHVELGKGIG----------------------- 60
           MACINVVMVNNAAVTNHVVAATGIWRS HVELGKGIG                       
Sbjct: 1   MACINVVMVNNAAVTNHVVAATGIWRSNHVELGKGIGLDTFWRTKRNMRTIKMQVLGNSG 60

Query: 61  -------------------GDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120
                               DDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY
Sbjct: 61  NSDGKLRQDSEILHTLAKVEDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120

Query: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180
           RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII
Sbjct: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180

Query: 181 TAAACHRHGLDCTIFMGSEDHINK----------------------RLQIIEAKKRVDKE 240
           TAAACHRHGLDCTIFMGSEDHINK                      +  ++EAKK + ++
Sbjct: 181 TAAACHRHGLDCTIFMGSEDHINKQSSNVQLITSLGAQVKWVEGNLKQAVLEAKKELIRK 240

Query: 241 VENSLLVVVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQK-- 300
            + SLLVVVRDEETNQFQETKKQG+DTLNSTADVLILGCIECTASNVLKLFLDHFIQK  
Sbjct: 241 SKTSLLVVVRDEETNQFQETKKQGIDTLNSTADVLILGCIECTASNVLKLFLDHFIQKDK 300

Query: 301 --------------------------------IRIKRVKVLELLKEMGKVEFYTVTDMEV 311
                                            R K +K L  LKEMGKVEFYTVTDMEV
Sbjct: 301 DVRLILVQPYNGIMHTAPQIMLPHSIGEGLESQREKGLKYLNFLKEMGKVEFYTVTDMEV 360

BLAST of IVF0013436 vs. ExPASy TrEMBL
Match: A0A0A0LS28 (PALP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064160 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.2e-118
Identity = 257/408 (62.99%), Postives = 271/408 (66.42%), Query Frame = 0

Query: 1   MACINVVMVNNAAVTNHVVAATGIWRSTHVELGKGIG----------------------- 60
           MACI+VVMVNNAAVTN VV ATGIWRS HV+LGKGIG                       
Sbjct: 1   MACISVVMVNNAAVTNQVVGATGIWRSNHVKLGKGIGLDTFSTTKRNMGKTKMQVLGNSG 60

Query: 61  -------------------GDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120
                               DDEFD  YTD FQEEVVEE RVF G EMEVC+AERLT QY
Sbjct: 61  NFDGKLRLDSRILHMVAKQMDDEFDIFYTDGFQEEVVEETRVFVGGEMEVCFAERLTKQY 120

Query: 121 RNEEGRGPEIYIKRDGDV-INPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGI 180
           RNEEGRGPEIYIKRD DV INPFRDHKIISSVIIKVMAAKR GKSVIAATGG QGQ YG 
Sbjct: 121 RNEEGRGPEIYIKRDRDVLINPFRDHKIISSVIIKVMAAKRKGKSVIAATGGSQGQLYGF 180

Query: 181 ITAAACHRHGLDCTIFMGSEDHINKR---LQII-------------------EAKKRVDK 240
           ITAAACHRHGLDCTIFMGSED INK+   LQ+I                   EAKK + +
Sbjct: 181 ITAAACHRHGLDCTIFMGSED-INKQSLNLQLITSLGAQVKWVEGNLKQAVLEAKKELIR 240

Query: 241 EVENSLLVVVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDH-FIQK 300
           + E SLLVV RDEE NQFQETK+QGMD L  TAD+LILGCIE +ASNVL+LFLDH FIQK
Sbjct: 241 KSETSLLVVARDEEPNQFQETKRQGMDKLGGTADILILGCIESSASNVLRLFLDHYFIQK 300

Query: 301 ----------------------------------IRIKRVKVLELLKEMGKVEFYTVTDM 309
                                              R K +K L  LKE+GKVEFYTVTDM
Sbjct: 301 DKDVRLILVQPDNGIMHSASQIMIPHPIGEGLESQREKGLKYLSFLKEIGKVEFYTVTDM 360

BLAST of IVF0013436 vs. ExPASy TrEMBL
Match: A0A1S4DU16 (tryptophan synthase beta chain 1, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485486 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.7e-107
Identity = 219/308 (71.10%), Postives = 232/308 (75.32%), Query Frame = 0

Query: 1   MACINVVMVNNAAVTNHVVAATGIWRSTHVELGKGIG----------------------- 60
           MACINVVMVNNAAVTNHVVAATGIWRS HVELGKGIG                       
Sbjct: 1   MACINVVMVNNAAVTNHVVAATGIWRSNHVELGKGIGLDTFWRTKRNMRTIKMQVLGNSG 60

Query: 61  -------------------GDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120
                               DDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY
Sbjct: 61  NSDGKLRQDSEILHTLAKVEDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120

Query: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180
           RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII
Sbjct: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180

Query: 181 TAAACHRHGLDCTIFMGSEDHINK----------------------RLQIIEAKKRVDKE 240
           TAAACHRHGLDCTIFMGSEDHINK                      +  ++EAKK + ++
Sbjct: 181 TAAACHRHGLDCTIFMGSEDHINKQSSNVQLITSLGAQVKWVEGNLKQAVLEAKKELIRK 240

Query: 241 VENSLLVVVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQKIR 245
            + SLLVVVRDEETNQFQETKKQG+DTLNSTADVLILGCIECTASNVLKLFLDHFIQK +
Sbjct: 241 SKTSLLVVVRDEETNQFQETKKQGIDTLNSTADVLILGCIECTASNVLKLFLDHFIQKDK 300

BLAST of IVF0013436 vs. ExPASy TrEMBL
Match: A0A1S3B3A1 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103485497 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-42
Identity = 143/360 (39.72%), Postives = 187/360 (51.94%), Query Frame = 0

Query: 41  EFDFLYTD-KFQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINP 100
           EF+ +  D KFQEE+   +R F GRE  + YAERLT  Y+NEEG+GPEIYIKR+   +N 
Sbjct: 89  EFNLVLNDSKFQEELEVALRDFVGRETPLYYAERLTKHYKNEEGKGPEIYIKRED--LNH 148

Query: 101 FRDHKIISSVIIKVMAAKRMG-KSVIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSED 160
              HK +++ I +VM AKRMG KSV+AATG G   Q+G+ TAAAC +H LDCTIFMGSED
Sbjct: 149 CGAHK-MNNAIAQVMIAKRMGRKSVVAATGAG---QHGVATAAACAKHDLDCTIFMGSED 208

Query: 161 HINKR------LQIIEAK-KRVDKEVENSLLVVVRDEETN-------------------- 220
            INK+      ++++ AK K V+   +++    +R+   N                    
Sbjct: 209 -INKQSSNVLLIKLLGAKVKSVEGNFKDASSEAIREWVGNLETSYYLTGTVVGPYPCPAM 268

Query: 221 --QFQ-----ETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQK-IRIKRVKV- 280
             +FQ     ET++Q  +   +  DVL L CI  + SN L LF +   +K +R+  V+  
Sbjct: 269 VREFQSVIGKETRRQAKEKWGAKPDVL-LACIG-SGSNALGLFHEFINEKDVRLIGVEAA 328

Query: 281 ------------------------------------------------------LELLKE 309
                                                                 L  LKE
Sbjct: 329 GFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVGLEYPGVGPELSFLKE 388

BLAST of IVF0013436 vs. NCBI nr
Match: XP_008441348.1 (PREDICTED: tryptophan synthase beta chain 1, chloroplastic-like isoform X1 [Cucumis melo] >KAA0056874.1 tryptophan synthase beta chain 1 [Cucumis melo var. makuwa] >TYJ99377.1 tryptophan synthase beta chain 1 [Cucumis melo var. makuwa])

HSP 1 Score: 518 bits (1335), Expect = 3.26e-182
Identity = 287/408 (70.34%), Postives = 298/408 (73.04%), Query Frame = 0

Query: 1   MACINVVMVNNAAVTNHVVAATGIWRSTHVELGKGIG----------------------- 60
           MACINVVMVNNAAVTNHVVAATGIWRS HVELGKGIG                       
Sbjct: 1   MACINVVMVNNAAVTNHVVAATGIWRSNHVELGKGIGLDTFWRTKRNMRTIKMQVLGNSG 60

Query: 61  -------------------GDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120
                               DDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY
Sbjct: 61  NSDGKLRQDSEILHTLAKVEDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120

Query: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180
           RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII
Sbjct: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180

Query: 181 TAAACHRHGLDCTIFMGSEDHINKRLQ----------------------IIEAKKRVDKE 240
           TAAACHRHGLDCTIFMGSEDHINK+                        ++EAKK + ++
Sbjct: 181 TAAACHRHGLDCTIFMGSEDHINKQSSNVQLITSLGAQVKWVEGNLKQAVLEAKKELIRK 240

Query: 241 VENSLLVVVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQK-- 300
            + SLLVVVRDEETNQFQETKKQG+DTLNSTADVLILGCIECTASNVLKLFLDHFIQK  
Sbjct: 241 SKTSLLVVVRDEETNQFQETKKQGIDTLNSTADVLILGCIECTASNVLKLFLDHFIQKDK 300

Query: 301 -IRI-------------------------------KRVKVLELLKEMGKVEFYTVTDMEV 310
            +R+                               K +K L  LKEMGKVEFYTVTDMEV
Sbjct: 301 DVRLILVQPYNGIMHTAPQIMLPHSIGEGLESQREKGLKYLNFLKEMGKVEFYTVTDMEV 360

BLAST of IVF0013436 vs. NCBI nr
Match: XP_016899195.1 (PREDICTED: tryptophan synthase beta chain 1, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 399 bits (1025), Expect = 2.79e-136
Identity = 218/298 (73.15%), Postives = 226/298 (75.84%), Query Frame = 0

Query: 1   MACINVVMVNNAAVTNHVVAATGIWRSTHVELGKGIG----------------------- 60
           MACINVVMVNNAAVTNHVVAATGIWRS HVELGKGIG                       
Sbjct: 1   MACINVVMVNNAAVTNHVVAATGIWRSNHVELGKGIGLDTFWRTKRNMRTIKMQVLGNSG 60

Query: 61  -------------------GDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120
                               DDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY
Sbjct: 61  NSDGKLRQDSEILHTLAKVEDDEFDFLYTDKFQEEVVEEMRVFAGREMEVCYAERLTNQY 120

Query: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180
           RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII
Sbjct: 121 RNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMGKSVIAATGGGQGQQYGII 180

Query: 181 TAAACHRHGLDCTIFMGSEDHINKRLQ----------------------IIEAKKRVDKE 234
           TAAACHRHGLDCTIFMGSEDHINK+                        ++EAKK + ++
Sbjct: 181 TAAACHRHGLDCTIFMGSEDHINKQSSNVQLITSLGAQVKWVEGNLKQAVLEAKKELIRK 240

BLAST of IVF0013436 vs. NCBI nr
Match: XP_011652793.1 (tryptophan synthase beta chain 2, chloroplastic [Cucumis sativus] >KAE8652670.1 hypothetical protein Csa_013304 [Cucumis sativus])

HSP 1 Score: 353 bits (905), Expect = 1.73e-118
Identity = 204/301 (67.77%), Postives = 218/301 (72.43%), Query Frame = 0

Query: 66  MEVCYAERLTNQYRNEEGRGPEIYIKRDGDV-INPFRDHKIISSVIIKVMAAKRMGKSVI 125
           MEVC+AERLT QYRNEEGRGPEIYIKRD DV INPFRDHKIISSVIIKVMAAKR GKSVI
Sbjct: 1   MEVCFAERLTKQYRNEEGRGPEIYIKRDRDVLINPFRDHKIISSVIIKVMAAKRKGKSVI 60

Query: 126 AATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDHINKR---LQII-------------- 185
           AATGG QGQ YG ITAAACHRHGLDCTIFMGSED INK+   LQ+I              
Sbjct: 61  AATGGSQGQLYGFITAAACHRHGLDCTIFMGSED-INKQSLNLQLITSLGAQVKWVEGNL 120

Query: 186 -----EAKKRVDKEVENSLLVVVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASN 245
                EAKK + ++ E SLLVV RDEE NQFQETK+QGMD L  TAD+LILGCIE +ASN
Sbjct: 121 KQAVLEAKKELIRKSETSLLVVARDEEPNQFQETKRQGMDKLGGTADILILGCIESSASN 180

Query: 246 VLKLFLDH-FIQK---IRI-------------------------------KRVKVLELLK 305
           VL+LFLDH FIQK   +R+                               K +K L  LK
Sbjct: 181 VLRLFLDHYFIQKDKDVRLILVQPDNGIMHSASQIMIPHPIGEGLESQREKGLKYLSFLK 240

Query: 306 EMGKVEFYTVTDMEVREARNLYFKLEGIFPSKEASYAFAYLHKLCPTLSDGCKVVVHCSG 308
           E+GKVEFYTVTDMEV EARNLYFKLE  FPSKEASYAFAYLHKLCPTLSDGCKVVVHC G
Sbjct: 241 EIGKVEFYTVTDMEVMEARNLYFKLESNFPSKEASYAFAYLHKLCPTLSDGCKVVVHCGG 300

BLAST of IVF0013436 vs. NCBI nr
Match: XP_008441364.1 (PREDICTED: tryptophan synthase beta chain 1-like [Cucumis melo])

HSP 1 Score: 182 bits (461), Expect = 8.10e-50
Identity = 143/360 (39.72%), Postives = 187/360 (51.94%), Query Frame = 0

Query: 41  EFDFLYTD-KFQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINP 100
           EF+ +  D KFQEE+   +R F GRE  + YAERLT  Y+NEEG+GPEIYIKR+   +N 
Sbjct: 89  EFNLVLNDSKFQEELEVALRDFVGRETPLYYAERLTKHYKNEEGKGPEIYIKRED--LNH 148

Query: 101 FRDHKIISSVIIKVMAAKRMG-KSVIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSED 160
              HK+ ++ I +VM AKRMG KSV+AATG GQ   +G+ TAAAC +H LDCTIFMGSED
Sbjct: 149 CGAHKM-NNAIAQVMIAKRMGRKSVVAATGAGQ---HGVATAAACAKHDLDCTIFMGSED 208

Query: 161 HINKR------LQIIEAK-KRVDKEVENSLLVVVRDEETN-------------------- 220
            INK+      ++++ AK K V+   +++    +R+   N                    
Sbjct: 209 -INKQSSNVLLIKLLGAKVKSVEGNFKDASSEAIREWVGNLETSYYLTGTVVGPYPCPAM 268

Query: 221 --QFQ-----ETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQK-IRIKRVKV- 280
             +FQ     ET++Q  +   +  DVL L CI  + SN L LF +   +K +R+  V+  
Sbjct: 269 VREFQSVIGKETRRQAKEKWGAKPDVL-LACIG-SGSNALGLFHEFINEKDVRLIGVEAA 328

Query: 281 ------------------------------------------------------LELLKE 308
                                                                 L  LKE
Sbjct: 329 GFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVGLEYPGVGPELSFLKE 388

BLAST of IVF0013436 vs. NCBI nr
Match: XP_038893791.1 (tryptophan synthase beta chain 1-like [Benincasa hispida])

HSP 1 Score: 181 bits (458), Expect = 2.33e-49
Identity = 162/450 (36.00%), Postives = 207/450 (46.00%), Query Frame = 0

Query: 8   MVNNAAVTNHVVAATGIWRSTHVELGK-GIGG-------------------DD------- 67
           +V NAA+TN V AA GI RS HV+LGK GIG                    DD       
Sbjct: 5   LVKNAALTNQVEAARGIARS-HVKLGKLGIGSAILATTKKNMPTIKMQLLTDDPKNKSQK 64

Query: 68  ------------------------------EFDFLYTD-KFQEEVVEEMRVFAGREMEVC 127
                                         EF+ +  D KFQEE+   +R F GRE  + 
Sbjct: 65  LSIGELGKFGKFGGKFVPESLITCLGKLEAEFNLVLNDSKFQEELEVALRDFVGRETPLY 124

Query: 128 YAERLTNQYRNEEGRGPEIYIKRDGDVINPFRDHKIISSVIIKVMAAKRMG-KSVIAATG 187
           YAERLT  Y+NEEG+GPEIYIKR+   +N    HK+ ++ I +VM AKRMG KSV+AATG
Sbjct: 125 YAERLTKHYKNEEGKGPEIYIKRED--LNHCGAHKM-NNAIAQVMIAKRMGRKSVVAATG 184

Query: 188 GGQGQQYGIITAAACHRHGLDCTIFMGSEDHINKRLQIIEAK------KRVDKEVENSLL 247
            GQ   +G+ TAAAC ++ LDCTIFMGSED   +   ++  K      K V+   +N+  
Sbjct: 185 AGQ---HGVATAAACAKNDLDCTIFMGSEDIKKQSSNVLLIKLLGAQVKSVEGNFKNATS 244

Query: 248 VVVRD----------------------EETNQFQ-----ETKKQGMDTLNSTADVLILGC 307
             +R                       +   +FQ     ET++Q MD      DVL L C
Sbjct: 245 EAIRQWVGNLEMSYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVL-LAC 304

BLAST of IVF0013436 vs. TAIR 10
Match: AT5G28237.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 129.4 bits (324), Expect = 5.0e-30
Identity = 113/366 (30.87%), Postives = 172/366 (46.99%), Query Frame = 0

Query: 39  DDEFDFLYTD-KFQEEVVEEMRVFAGREMEVCYAERLTNQYRN----EEGRGPEIYIKRD 98
           +DEF+F+  D +FQEE+   +R + GRE  + +AERLT  Y+N     EG GPEIY+KR+
Sbjct: 92  EDEFNFVRCDHEFQEELTTALRDYVGRETPLYFAERLTEHYKNIVPTIEG-GPEIYLKRE 151

Query: 99  GDVINPFRDHKIISSVIIKVMAAKRMGKS-VIAATGGGQGQQYGIITAAACHRHGLDCTI 158
              ++    HK I++ + + M ++R+G S V+AATG G   Q+G+ TAAAC +  L+CT+
Sbjct: 152 D--LSHCGSHK-INNALAQAMISRRLGCSRVVAATGAG---QHGVATAAACAKLSLECTV 211

Query: 159 FMGSEDHINKRLQIIEAK------------------KRVDKEVENSLL------------ 218
           FMG+ D   +   ++  K                  + +   VEN               
Sbjct: 212 FMGAADIEKQSFNVLSMKLLGAQVISVEGTFKDASSEAIRNWVENLYTTYYLSGTVVGPH 271

Query: 219 ---VVVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFI--QKIRI 278
              ++VR+ ++   +ET++Q         DVL+  C+  + SN L LF   F+  + +R+
Sbjct: 272 PCPIIVREFQSVIGKETRRQAKQLWGGKPDVLV-ACVG-SGSNALGLF-HEFVGDEDVRL 331

Query: 279 KRVKV------------------------------------------------------- 309
             V+                                                        
Sbjct: 332 VGVEAAGLGLDSGKHSATLAFGDVGVYHGSMSYLLQDDQGQILKPHSVGVGLEYPGVGPE 391

BLAST of IVF0013436 vs. TAIR 10
Match: AT5G54810.1 (tryptophan synthase beta-subunit 1 )

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-29
Identity = 105/355 (29.58%), Postives = 164/355 (46.20%), Query Frame = 0

Query: 48  DKFQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINPFRDHKIIS 107
           D FQ E+   ++ + GRE  + +AERLT  YR E G GP IY+KR+   +N    HK I+
Sbjct: 111 DDFQRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKRED--LNHTGAHK-IN 170

Query: 108 SVIIKVMAAKRMGKS-VIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDHINK---- 167
           + + + + AKR+GK  +IA TG G   Q+G+ TA  C R GL+C I+MG++D   +    
Sbjct: 171 NAVAQALLAKRLGKKRIIAETGAG---QHGVATATVCARFGLECIIYMGAQDMERQALNV 230

Query: 168 -RLQIIEAKKR---------------------VDKEVENSLL----------VVVRDEET 227
            R++++ A+ R                      + E  + +L          ++VRD   
Sbjct: 231 FRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHA 290

Query: 228 NQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQKIRIKRV---------- 287
              +ET+KQ ++      DVL+  C+    SN + LF   F+    ++ +          
Sbjct: 291 VIGKETRKQALEKWGGKPDVLV-ACVG-GGSNAMGLF-HEFVNDTEVRMIGVEAAGFGLD 350

Query: 288 -----------------------------KVLE------------------LLKEMGKVE 309
                                        +++E                    K+MG+ E
Sbjct: 351 SGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAE 410

BLAST of IVF0013436 vs. TAIR 10
Match: AT4G27070.1 (tryptophan synthase beta-subunit 2 )

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-29
Identity = 108/362 (29.83%), Postives = 168/362 (46.41%), Query Frame = 0

Query: 42  FDFLYTDK-FQEEVVEEMRVFAGREMEVCYAERLTNQYRNEEGRGPEIYIKRDGDVINPF 101
           F  L TD+ FQ E+ E ++ + GRE  + +AERLT  YR E G GP IY+KR+   +N  
Sbjct: 109 FYSLATDEDFQRELAEILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKRED--LNHT 168

Query: 102 RDHKIISSVIIKVMAAKRMGKS-VIAATGGGQGQQYGIITAAACHRHGLDCTIFMGSEDH 161
             HK I++ + + + AKR+GK  +IA TG G   Q+G+ TA  C R GL C I+MG++D 
Sbjct: 169 GAHK-INNAVAQALLAKRLGKKRIIAETGAG---QHGVATATVCARFGLQCIIYMGAQDM 228

Query: 162 INK-----RLQIIEAKKR---------------------VDKEVENSLL----------V 221
             +     R++++ A+ R                      + E  + +L          +
Sbjct: 229 ERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPM 288

Query: 222 VVRDEETNQFQETKKQGMDTLNSTADVLILGCIECTASNVLKLFLDHFIQKIRIKRV--- 281
           +VRD      +ET+KQ M+      DVL+  C+    SN + LF   F+    ++ +   
Sbjct: 289 MVRDFHAVIGKETRKQAMEKWGGKPDVLV-ACVG-GGSNAMGLF-HEFVDDTEVRMIGVE 348

Query: 282 ------------------------------------KVLE------------------LL 309
                                               +++E                   L
Sbjct: 349 AAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFL 408

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P146711.6e-2829.58Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
P432844.5e-2829.86Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 G... [more]
P252695.9e-2829.83Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
P432833.2e-2629.86Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=... [more]
O500465.5e-2629.83Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=1692... [more]
Match NameE-valueIdentityDescription
A0A5D3BJR84.0e-14470.34Tryptophan synthase beta chain 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3B3V84.0e-14470.34tryptophan synthase beta chain 1, chloroplastic-like isoform X1 OS=Cucumis melo ... [more]
A0A0A0LS282.2e-11862.99PALP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064160 PE=4 S... [more]
A0A1S4DU161.7e-10771.10tryptophan synthase beta chain 1, chloroplastic-like isoform X2 OS=Cucumis melo ... [more]
A0A1S3B3A11.5e-4239.72Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103485497 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_008441348.13.26e-18270.34PREDICTED: tryptophan synthase beta chain 1, chloroplastic-like isoform X1 [Cucu... [more]
XP_016899195.12.79e-13673.15PREDICTED: tryptophan synthase beta chain 1, chloroplastic-like isoform X2 [Cucu... [more]
XP_011652793.11.73e-11867.77tryptophan synthase beta chain 2, chloroplastic [Cucumis sativus] >KAE8652670.1 ... [more]
XP_008441364.18.10e-5039.72PREDICTED: tryptophan synthase beta chain 1-like [Cucumis melo][more]
XP_038893791.12.33e-4936.00tryptophan synthase beta chain 1-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT5G28237.15.0e-3030.87Pyridoxal-5'-phosphate-dependent enzyme family protein [more]
AT5G54810.11.1e-2929.58tryptophan synthase beta-subunit 1 [more]
AT4G27070.14.2e-2929.83tryptophan synthase beta-subunit 2 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeGENE3D3.40.50.1100coord: 233..309
e-value: 2.9E-13
score: 51.7
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeGENE3D3.40.50.1100coord: 47..211
e-value: 2.3E-19
score: 72.0
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 42..307
NoneNo IPR availablePANTHERPTHR48077TRYPTOPHAN SYNTHASE-RELATEDcoord: 39..165
NoneNo IPR availablePANTHERPTHR48077:SF4TRYPTOPHAN SYNTHASEcoord: 183..234
NoneNo IPR availablePANTHERPTHR48077TRYPTOPHAN SYNTHASE-RELATEDcoord: 183..234
coord: 244..308
NoneNo IPR availablePANTHERPTHR48077:SF4TRYPTOPHAN SYNTHASEcoord: 244..308
coord: 39..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0013436.1IVF0013436.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006520 cellular amino acid metabolic process