IVF0013431 (gene) Melon (IVF77) v1

Overview
NameIVF0013431
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein
Locationchr05: 10023841 .. 10024137 (+)
RNA-Seq ExpressionIVF0013431
SyntenyIVF0013431
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTATGAAGACTTTGTTGAGGACTATTATAAAATATTAACTTACGTTGCATGCTATGCGCCTCAGTTTCAACCTGTACCGCATGAAGATTATTGGATCACACCTACAAGTATGCCTGTCTTACTGTCAGATCCATCGTTGTTGAGAAAATCAGGTAGATCAAAGAGTTCACGTTATCACAACGAGATGGATTGGACAGAACAAAGTGCTCAACAACGATGCTCATTCTGTAGTCAACTTGGTCATAACCGATGGAGGTGTACTTTGTTAAGGAGACAGGCACCTGATAGTTAG

mRNA sequence

ATGAACTATGAAGACTTTGTTGAGGACTATTATAAAATATTAACTTACGTTGCATGCTATGCGCCTCAGTTTCAACCTGTACCGCATGAAGATTATTGGATCACACCTACAAGTATGCCTGTCTTACTGTCAGATCCATCGTTGTTGAGAAAATCAGGTAGATCAAAGAGTTCACGTTATCACAACGAGATGGATTGGACAGAACAAAGTGCTCAACAACGATGCTCATTCTGTAGTCAACTTGGTCATAACCGATGGAGGTGTACTTTGTTAAGGAGACAGGCACCTGATAGTTAG

Coding sequence (CDS)

ATGAACTATGAAGACTTTGTTGAGGACTATTATAAAATATTAACTTACGTTGCATGCTATGCGCCTCAGTTTCAACCTGTACCGCATGAAGATTATTGGATCACACCTACAAGTATGCCTGTCTTACTGTCAGATCCATCGTTGTTGAGAAAATCAGGTAGATCAAAGAGTTCACGTTATCACAACGAGATGGATTGGACAGAACAAAGTGCTCAACAACGATGCTCATTCTGTAGTCAACTTGGTCATAACCGATGGAGGTGTACTTTGTTAAGGAGACAGGCACCTGATAGTTAG

Protein sequence

MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRYHNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS
Homology
[Close]
BLAST of IVF0013431 vs. ExPASy TrEMBL
Match: A0A5D3BR89 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00280 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.6e-52
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
           MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY
Sbjct: 330 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 389

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 99
           HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS
Sbjct: 390 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 427

[Close]
BLAST of IVF0013431 vs. ExPASy TrEMBL
Match: A0A5A7TD93 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G00780 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.6e-52
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
           MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY
Sbjct: 418 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 477

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 99
           HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS
Sbjct: 478 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 515

[Close]
BLAST of IVF0013431 vs. ExPASy TrEMBL
Match: A0A1S3C4P2 (uncharacterized protein LOC103496991 OS=Cucumis melo OX=3656 GN=LOC103496991 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.6e-52
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
           MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY
Sbjct: 355 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 414

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 99
           HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS
Sbjct: 415 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 452

[Close]
BLAST of IVF0013431 vs. ExPASy TrEMBL
Match: A0A5D3BJ66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4012G00010 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47
Identity = 91/98 (92.86%), Postives = 92/98 (93.88%), Query Frame = 0 

Query: 1  MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
          MNYEDFVEDYYKI TY ACYAPQFQPVPHEDYWITPTSMPVLL DPSLLRKSGR K+SRY
Sbjct: 1  MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 60

Query: 61 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 99
          HNEMDWTEQSAQQRCSFCSQLGHNR  CTLLRRQAPDS
Sbjct: 61 HNEMDWTEQSAQQRCSFCSQLGHNRRSCTLLRRQAPDS 98

[Close]
BLAST of IVF0013431 vs. ExPASy TrEMBL
Match: A0A5D3D607 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00150 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.7e-46
Identity = 91/98 (92.86%), Postives = 92/98 (93.88%), Query Frame = 0 

Query: 1  MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
          MNYEDFVEDYYKI TYVACYAPQFQPVPHEDYWITPTSMPVLL DPSLLRKSGR K+SRY
Sbjct: 1  MNYEDFVEDYYKISTYVACYAPQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 60

Query: 61 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 99
          HNEMDWTEQSAQQRCSF SQLGHNR  CTLLRRQAPDS
Sbjct: 61 HNEMDWTEQSAQQRCSFSSQLGHNRRSCTLLRRQAPDS 98

[Close]
BLAST of IVF0013431 vs. NCBI nr
Match: TYK01705.1 (uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (537), Expect = 9.39e-65
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
           MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY
Sbjct: 330 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 389

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 98
           HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS
Sbjct: 390 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 427

[Close]
BLAST of IVF0013431 vs. NCBI nr
Match: XP_008457265.1 (PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo])

HSP 1 Score: 211 bits (537), Expect = 1.74e-64
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
           MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY
Sbjct: 355 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 414

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 98
           HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS
Sbjct: 415 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 452

[Close]
BLAST of IVF0013431 vs. NCBI nr
Match: KAA0039601.1 (uncharacterized protein E6C27_scaffold744G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (537), Expect = 7.36e-64
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
           MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY
Sbjct: 418 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 477

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 98
           HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS
Sbjct: 478 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 515

[Close]
BLAST of IVF0013431 vs. NCBI nr
Match: TYJ98405.1 (uncharacterized protein E5676_scaffold4012G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (494), Expect = 1.70e-62
Identity = 91/98 (92.86%), Postives = 92/98 (93.88%), Query Frame = 0 

Query: 1  MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
          MNYEDFVEDYYKI TY ACYAPQFQPVPHEDYWITPTSMPVLL DPSLLRKSGR K+SRY
Sbjct: 1  MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 60

Query: 61 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 98
          HNEMDWTEQSAQQRCSFCSQLGHNR  CTLLRRQAPDS
Sbjct: 61 HNEMDWTEQSAQQRCSFCSQLGHNRRSCTLLRRQAPDS 98

[Close]
BLAST of IVF0013431 vs. NCBI nr
Match: TYK18933.1 (uncharacterized protein E5676_scaffold418G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 192 bits (488), Expect = 1.40e-61
Identity = 91/98 (92.86%), Postives = 92/98 (93.88%), Query Frame = 0 

Query: 1  MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 60
          MNYEDFVEDYYKI TYVACYAPQFQPVPHEDYWITPTSMPVLL DPSLLRKSGR K+SRY
Sbjct: 1  MNYEDFVEDYYKISTYVACYAPQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 60

Query: 61 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 98
          HNEMDWTEQSAQQRCSF SQLGHNR  CTLLRRQAPDS
Sbjct: 61 HNEMDWTEQSAQQRCSFSSQLGHNRRSCTLLRRQAPDS 98

The following BLAST results are available for this feature:
BLAST of IVF0013431 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0013431 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BR895.6e-52100.00SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7TD935.6e-52100.00SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A1S3C4P25.6e-52100.00uncharacterized protein LOC103496991 OS=Cucumis melo OX=3656 GN=LOC103496991 PE=... [more]
A0A5D3BJ665.4e-4792.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D6072.7e-4692.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0013431 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01705.19.39e-65100.00uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa][more]
XP_008457265.11.74e-64100.00PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo][more]
KAA0039601.17.36e-64100.00uncharacterized protein E6C27_scaffold744G00780 [Cucumis melo var. makuwa][more]
TYJ98405.11.70e-6292.86uncharacterized protein E5676_scaffold4012G00010 [Cucumis melo var. makuwa][more]
TYK18933.11.40e-6192.86uncharacterized protein E5676_scaffold418G00150 [Cucumis melo var. makuwa][more]
BLAST of IVF0013431 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0013431.1IVF0013431.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010073 meristem maintenance
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding