IVF0013396 (gene) Melon (IVF77) v1

Overview


Name	IVF0013396
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Sel1-like protein
Location	chr04: 31977101 .. 31980322 (+)
RNA-Seq Expression	IVF0013396
Synteny	IVF0013396

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAAACGACAGCGTTGTAAGAGATCCGAAAACCAAAACCCCCGTCCCACTCCTTCTGTCGGAAGTATATCCTTCTTAGTTTTCAAAATCTCCCAAACGCTCGACCTTTTTTCTGGGTTTCTTATTCTTTGTTTTTTTTGTTTTTTTTTTCCTTCAAAACCCAGCAAGAGGACAACGATTTTCGTTGTAGGAAGAAGGAAGGTAAGAAAAACTGTTTCCCTTCTCAAATTATTATACTAATCCTTCAAATCCCACTTCATTTTTCTCAATTTCTTCTCCCTTTTCATGAGATTGATCTCTCTTCTTTTAAGTTTTAACCAAATATAGAGTTTGCGGCGCTTCAGAATCTCCCCATATCATAAGGTCAAGGTTTCGGTTCCAGTAATCGAAGCCGTTCAAGTTCAAATACATGGAGATTAGCGGAGGAACAGAGGGCTTGAATCGCGTTCCTTTATCAGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTAAGGACACTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGTCAATTTCTTCACCCATCAATTCATTAAGATCCCATTGCTTAATCAATTCCTCCAAAAACCATGCCTAATTTACTTCACTTCTCGAAAATCTTCCGCTTATATAGATGTTTTTGGGTATTGTTGGTCAACCGTGTGTATCGTATGTACCCGTAAAGTCTGTTATGTTTCGGCTAAAAATAGTTCTCAGTTTTCTCCGTGATTTTGGTTCTTTATAATTTTTCCGTGATTTTTTGTGTGAATTTGGGGATGTCTTAAGATTATCAATTGTTCGAGAGTTGGCTTGATGGAATTTTTATATTTTTTTTGCTATTGCTTTTAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCGTCGGTCTGGAAAGTTAGTGATAAACATCCAGGTTGATTGTTACAATATAAATCTCTTATTTGTTGATGTCTTTTCCTTATCTTATCCATCCTCTTTGAACATCTCTTGCTAATTTCATAAGCTAACGTTGATTCAATAGGCTATAATGCTAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAACTACACCAGTGTTGCTGATTTCTCGATGTCATGTCAAAACAACCACTGGTATCTCCTCCACAACATGTCGTTTTGGCAATTCAACTTGTTATTCTTTGTCTTTATGTGTGGCATCAATTATTCTTTCTTGCACATGTGAAAATGCACTAGTAAAAATGATTAAGTTGGCAATATATGACATTTTTGCTCACTGAACAAGTGCTTCGGGATTCAGCTTGAGTGATTAAAGTTTTACAACTATGCTGCTATGTGTTTCTATCATATACGGTTTTTCCTTCCAAACCCTTGGATGCGCCAATCATAATTTTTAGCTTTTCTTTCCTAGATTCAGTTATTGGTCCACCTCCTTGGATGATTTTGGGGGAGGGGATCTTAGATGATTACGCGAATATTAAGTTTGATCTTCTACCCTAGATCCTTATAGGTTATGTTGTTGTTCAAGATGCTAAACATCCTTTGGGCAATGATCGTGTTTTATGCAATTTGTGCTGAGGATCCTAAAGGATGGATAGGATGCACCAATCATAATTTTTAGCTTTTCTTCCCTATATCCAGTTATTGTTTCAACCTCCTTGGGTGATTTTGAGGGAGGGTATATTAGATGATTATGAATATTAAGTTCATTGAAGTTGATAACTGTTGGTCATAAACTCTGACGACAAAAGGATCTTCTACCCTAGAGACTTAGAGGTTACGTGTCACTTGTTTGTTGTTCAAGATGCTAAACATCCTTTGGGCATTGATCATGTTATACAATTTTATGCCGAAGATCCTAAAGGATGGATAGGGCACACCAACCTTAACTTTTAGCTTTTCTTTCCTATATCCAGTTATTGTTCTGATGTCCTTGGATGAGTTTGAGGGAGGGGATCTTAGATGATTATGAATATTAAGTTCATTGGAGTTGATTGTTGTAGGTCACAAACTCTGATGACAAAAGGATCTTCTACCTTAGAGCCTTAGAGGTTACGTGTCACTTGTTTGTTGTTCAAGATGCTAAACATCCTTTGGGCGTCGATCGTGTTATGCAATTTGTGCTGAAGATCCTAAAGAATGATTGTTTTATCCTCCAAATATGTTTTCGTGTCTTTTACCAATCCATCTGCTGTTTCTAAGACAACTTAGCCGCATGGTGAAAGCATAGCTATGATTTAAAATGTTGCAGTCCTTCAAATTCACTTATTACAGATGGTAATTTTCTCTTCATATGAATGTGCAATTAGTTGAAACTGTACTATGGTTGATTCGAAGGATTAAATTGTCCACATGATATAAGGATTTCAATATTACGTAATGGATATTTAAATCAGTTGAATTTAATAATTATGTCTACTCCTATTAGGTTATAAATTTTAGGTTTTTGTTTTTATATTTAGGCTGGTTAATGGATGATATTTGTTATTTTTTAATATTGTATGAGTACTTATAAAATATGTCGATCGTTAACGTTAATTGTTCCATGAAAATAGTCAGGATATGTGTGAGCTAGCCCAAACAATCACATATATTTAAAAATAAAATTGTTAATATTGACGTTGAACTCTTCTATTTACGAATGTAATGGTGG

mRNA sequence

ATTAAAACGACAGCGTTGTAAGAGATCCGAAAACCAAAACCCCCGTCCCACTCCTTCTGTCGGAAGTATATCCTTCTTAGTTTTCAAAATCTCCCAAACGCTCGACCTTTTTTCTGGGTTTCTTATTCTTTGTTTTTTTTGTTTTTTTTTTCCTTCAAAACCCAGCAAGAGGACAACGATTTTCGTTGTAGGAAGAAGGAAGTTTTAACCAAATATAGAGTTTGCGGCGCTTCAGAATCTCCCCATATCATAAGGTCAAGGTTTCGGTTCCAGTAATCGAAGCCGTTCAAGTTCAAATACATGGAGATTAGCGGAGGAACAGAGGGCTTGAATCGCGTTCCTTTATCAGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTAAGGACACTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCGTCGGTCTGGAAAGTTAGTGATAAACATCCAGGCTATAATGCTAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAACTACACCAGTGTTGCTGATTTCTCGATGTCATGTCAAAACAACCACTGGTCACAAACTCTGATGACAAAAGGATCTTCTACCTTAGAGCCTTAGAGGTTACGTGTCACTTGTTTGTTGTTCAAGATGCTAAACATCCTTTGGGCGTCGATCGTGTTATGCAATTTGTGCTGAAGATCCTAAAGAATGATTGTTTTATCCTCCAAATATGTTTTCGTGTCTTTTACCAATCCATCTGCTGTTTCTAAGACAACTTAGCCGCATGGTGAAAGCATAGCTATGATTTAAAATGTTGCAGTCCTTCAAATTCACTTATTACAGATGGTAATTTTCTCTTCATATGAATGTGCAATTAGTTGAAACTGTACTATGGTTGATTCGAAGGATTAAATTGTCCACATGATATAAGGATTTCAATATTACGTAATGGATATTTAAATCAGTTGAATTTAATAATTATGTCTACTCCTATTAGGTTATAAATTTTAGGTTTTTGTTTTTATATTTAGGCTGGTTAATGGATGATATTTGTTATTTTTTAATATTGTATGAGTACTTATAAAATATGTCGATCGTTAACGTTAATTGTTCCATGAAAATAGTCAGGATATGTGTGAGCTAGCCCAAACAATCACATATATTTAAAAATAAAATTGTTAATATTGACGTTGAACTCTTCTATTTACGAATGTAATGGTGG

Coding sequence (CDS)

ATGGTTAAGGACACTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCGTCGGTCTGGAAAGTTAGTGATAAACATCCAGGCTATAATGCTAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAA

Protein sequence

MVKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

Homology

[Close]

BLAST of IVF0013396 vs. ExPASy TrEMBL
Match: A0A1S3B5I4 (uncharacterized protein LOC103486254 OS=Cucumis melo OX=3656 GN=LOC103486254 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 76
           ASDSDSDELTRDS
Sbjct: 88  ASDSDSDELTRDS 100

[Close]

BLAST of IVF0013396 vs. ExPASy TrEMBL
Match: A0A5D3DNP0 (Sel1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00440 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 76
           ASDSDSDELTRDS
Sbjct: 88  ASDSDSDELTRDS 100

[Close]

BLAST of IVF0013396 vs. ExPASy TrEMBL
Match: A0A0A0LCP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730830 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 76
           ASDSDSDELTRDS
Sbjct: 88  ASDSDSDELTRDS 100

[Close]

BLAST of IVF0013396 vs. ExPASy TrEMBL
Match: A0A6J1J881 (uncharacterized protein LOC111482171 OS=Cucurbita maxima OX=3661 GN=LOC111482171 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.8e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 76
           ASDSDSDELTRDS
Sbjct: 88  ASDSDSDELTRDS 100

[Close]

BLAST of IVF0013396 vs. ExPASy TrEMBL
Match: A0A6J1F7C2 (uncharacterized protein LOC111441521 OS=Cucurbita moschata OX=3662 GN=LOC111441521 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.8e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 76
           ASDSDSDELTRDS
Sbjct: 88  ASDSDSDELTRDS 100

[Close]

BLAST of IVF0013396 vs. NCBI nr
Match: XP_008442362.1 (PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo] >XP_008442363.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo] >XP_008442364.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo] >XP_038903442.1 uncharacterized protein LOC120090028 [Benincasa hispida] >XP_038903443.1 uncharacterized protein LOC120090028 [Benincasa hispida] >XP_038903444.1 uncharacterized protein LOC120090028 [Benincasa hispida] >KAA0044203.1 Sel1-like protein [Cucumis melo var. makuwa] >TYK24929.1 Sel1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 148 bits (374), Expect = 1.41e-44
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 75
           ASDSDSDELTRDS
Sbjct: 88  ASDSDSDELTRDS 100

[Close]

BLAST of IVF0013396 vs. NCBI nr
Match: XP_011651845.1 (uncharacterized protein LOC101206121 [Cucumis sativus] >KGN58719.1 hypothetical protein Csa_001055 [Cucumis sativus])

HSP 1 Score: 148 bits (374), Expect = 1.41e-44
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 75
           ASDSDSDELTRDS
Sbjct: 88  ASDSDSDELTRDS 100

[Close]

BLAST of IVF0013396 vs. NCBI nr
Match: XP_022934323.1 (uncharacterized protein LOC111441521 [Cucurbita moschata] >XP_022934324.1 uncharacterized protein LOC111441521 [Cucurbita moschata] >XP_022983617.1 uncharacterized protein LOC111482171 [Cucurbita maxima] >XP_022983618.1 uncharacterized protein LOC111482171 [Cucurbita maxima] >XP_023526158.1 uncharacterized protein LOC111789719 [Cucurbita pepo subsp. pepo] >XP_023526159.1 uncharacterized protein LOC111789719 [Cucurbita pepo subsp. pepo] >KAG6580446.1 hypothetical protein SDJN03_20448, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017199.1 hypothetical protein SDJN02_19061, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148 bits (373), Expect = 2.00e-44
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 75
           ASDSDSDELTRDS
Sbjct: 88  ASDSDSDELTRDS 100

[Close]

BLAST of IVF0013396 vs. NCBI nr
Match: XP_022157335.1 (uncharacterized protein LOC111024062 [Momordica charantia])

HSP 1 Score: 147 bits (371), Expect = 4.03e-44
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
Sbjct: 28  KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 87

Query: 63  ASDSDSDELTRDS 75
           ASDSDSD+LTRDS
Sbjct: 88  ASDSDSDDLTRDS 100

[Close]

BLAST of IVF0013396 vs. NCBI nr
Match: XP_021661933.1 (uncharacterized protein LOC110651050 [Hevea brasiliensis] >XP_021661934.1 uncharacterized protein LOC110651050 [Hevea brasiliensis] >KAF2308015.1 hypothetical protein GH714_034363 [Hevea brasiliensis])

HSP 1 Score: 141 bits (355), Expect = 1.46e-41
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMT+ASR+RSSVWKVSDKHPGYN
Sbjct: 37  KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTRASRTRSSVWKVSDKHPGYN 96

Query: 63  ASDSDSDELTRDS 75
           ASDSDSDEL  DS
Sbjct: 97  ASDSDSDELKGDS 109

[Close]

BLAST of IVF0013396 vs. TAIR 10
Match: AT2G38450.1 (CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-27
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           KDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PGYN
Sbjct: 70  KDTLEEAKAGNITMQVLLGQMYYSGYGVPKDARKGRLWITKASRVRSSVWKVIDKRPGYN 129

Query: 63  ASDSDSD 70
           ASDSDS+
Sbjct: 130 ASDSDSE 136

[Close]

BLAST of IVF0013396 vs. TAIR 10
Match: AT5G05360.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 110.2 bits (274), Expect = 7.5e-25
Identity = 50/68 (73.53%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           +DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PGYN
Sbjct: 93  QDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKASRTRSSAWQVSDKPPGYN 152

Query: 63  ASDSDSDE 71
           ASDSDS++
Sbjct: 153 ASDSDSND 160

[Close]

BLAST of IVF0013396 vs. TAIR 10
Match: AT5G05360.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 8.6e-21
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 3   KDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN 62
           +DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG N
Sbjct: 93  QDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKASRTRSSAWQVSDKPPGNN 152

The following BLAST results are available for this feature:

BLAST of IVF0013396 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0013396 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B5I4	4.5e-33	100.00	uncharacterized protein LOC103486254 OS=Cucumis melo OX=3656 GN=LOC103486254 PE=...	[more]
A0A5D3DNP0	4.5e-33	100.00	Sel1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A0A0LCP0	4.5e-33	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730830 PE=4 SV=1	[more]
A0A6J1J881	5.8e-33	98.63	uncharacterized protein LOC111482171 OS=Cucurbita maxima OX=3661 GN=LOC111482171...	[more]
A0A6J1F7C2	5.8e-33	98.63	uncharacterized protein LOC111441521 OS=Cucurbita moschata OX=3662 GN=LOC1114415...	[more]

BLAST of IVF0013396 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442362.1	1.41e-44	100.00	PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo] >XP_008442363.1 P...	[more]
XP_011651845.1	1.41e-44	100.00	uncharacterized protein LOC101206121 [Cucumis sativus] >KGN58719.1 hypothetical ...	[more]
XP_022934323.1	2.00e-44	98.63	uncharacterized protein LOC111441521 [Cucurbita moschata] >XP_022934324.1 unchar...	[more]
XP_022157335.1	4.03e-44	98.63	uncharacterized protein LOC111024062 [Momordica charantia]	[more]
XP_021661933.1	1.46e-41	94.52	uncharacterized protein LOC110651050 [Hevea brasiliensis] >XP_021661934.1 unchar...	[more]

BLAST of IVF0013396 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38450.1	3.6e-27	82.09	CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis tha...	[more]
AT5G05360.1	7.5e-25	73.53	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]
AT5G05360.2	8.6e-21	71.67	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006597	Sel1-like repeat	SMART	SM00671	sel1	coord: 14..49 e-value: 6.3E-4 score: 29.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 5..62 e-value: 1.5E-7 score: 33.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..75
None	No IPR available	PANTHER	PTHR36792:SF6	TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 3..75
None	No IPR available	PANTHER	PTHR36792	EXPRESSED PROTEIN	coord: 3..75
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 7..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013396.5	IVF0013396.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding