IVF0013349 (gene) Melon (IVF77) v1

Overview


Name	IVF0013349
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RanBP2-type zinc finger protein
Location	chr10: 4009358 .. 4013306 (+)
RNA-Seq Expression	IVF0013349
Synteny	IVF0013349

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTGCGCTCTCATTCACGCTTCGAAACGGCGTTCGTACTCCCCATTTACACGACGAGCATCGCCGTTCCCGACTGAAGAAAAGATTGACGCAGCAGCTATTCCGAGTTCACAACAAGATCTCTCCGCCATCGTCTTTCTCATACGCCGCAACATGTCTCAGGTCTGTTCACTCCCCCTTAATTGTATATTGATTTTGTTTTCTCTAAGATTTCGAGATCTTTCTTCCTTAAACCCTAGGAAATCCTTGTTAATTATTTCTTATCGTTGAATGGAGCATAATTTGCGCATCTTTGTCTGTGTTTGCTCTATCCTTCTCTCCGTGCGATTTATTTGTTTCGCATTCAGGTAGGAATTGCGAGATACTTCCGGGGAATTTTGAGTTTGAGAATCTCACATGAATTCTCCTGGTTTTGAATTAATGGATCCATTAGCTGCGGAAATGAATTTTTTAATCTTCTCTCCTTTTTTATTTTCTGTGTCTTCTACAGGTTGATAGCAGGAATTCCTCTGCAGCCAAACGTGCTAGAACTGATGGTATGTATAGGGAACGGTTTTCCTTTGTAATTCATTCATTATTTCGCATGTACATTGGATTTGTAAATTTAATCATTACTTATTATTAGGTTTTTTGAGTGAATGCACTATAACGAAATTGAATCTGTTGACATTTGAGTCTTGTGAGATTTCATTTATTCGACATTGTTTGCCGTTAGTTTGACACTTCTTCTTCTTCTTCTCATTTTTTTAAAAAATTTTACTTTAGTCTACAGCATGTCATAAAGAGTGGTCTCATCTGTGTAGGGCTGTTTACTTGTTTATTTGTTTGTAGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGGTAAGAACATGAATGATGTCCCTAGTGAGACTTTAGTTATTGCGTTTATTCATTTACTTTAATTTTTAGCAATTAGCAGCATATTCTGGAGTTCTTTGTGTTTTTGCAATTTTAGGTGGTGATTATGTTTGCATTCAAGATATTTTTGTAATTATGGTATTGGATGTGCATTTTCTTTCAAGTCGTTACTGATTATTAACTACTTTTCATTAAAAAAAACTGATTATTAACTACTTGAGCTTTATGAAGTTTGAGTTTATTGAAAATTTTTAGGTTTAGGTTCTTCTTGGTGTACTCTCTTCAAGAGCTCTTGTAATTATGATCTTGAGTTCACTTTTTCCAGTTACTTGTAGCATTCCTTGGCCAGTCTCTCTACACTTCTTATACTTTTCTTTCATAAAATAAATGTTGGGTATTGGTTTTAACCTTCCACATCACCACCATACACTCAAAGTTGAACTCCATATTCTCTTGATAAACAATTGTGACCTTACTTGAGCTTTCTCTCTCTCCAGAAATCTGCTGCCAAGCCCGTTCAAGCTCCTCAGGGTTACTCCTATTCTGCTCCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCTTATGGTTCTTCTATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTATGTTCCCTTTCTTTTTCTACTCGTATTTTTTTAAATAAGAAACTGAGTTGAGAATCATGAAAGGATATACACGGGTGCATATTCTCCCACACAAGGGGATCCCAAACCTACAAATATGGTCTCCTATCCAAAAGAATAATACCTATTAGATATTATATGCTCACATTTGTTTGTGATTCTTACTTATTACAACATATTATTCTGTCTATCAAAATTATAACTTAAAATCCATTTATCTTTCTTCCACAAGTATTGTATGAGAAATGGGTGCCGTTTTGATCGATTGTCTATTCATCTGTTTATTTGGTTTCTTTGTTGTTTCCATAGGTGCAGTGTATGGTATTCCCCCGATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGTAGGTTTCTCAAAAGTCAATTTTCTATTTGGTGGCCCATCAGGTTTTTTTTTTTTAAGTTTTAAGTTTGGTGGACAATTTTAAATCTTTTGGTTTTCTGAAGATAAGAAATTTTTGAAATAAATGCATTATATATCACGTTACTTTATTCAGTTTAGTTTTGAAAACTATGTTCTAATAATACACTAACAAAGAATTGTAATGCTTTTTTTTTTTTTTTATTAAAGAAAATATTTCCAATGCTTTGAGTGTTGAAGGAGTGGATATTAAACCTGGATGTAAACAGCACGATTTTATTGCCTACAGTTTTTGTGGATAATTCCTAACGTTTTTTACTGGGGGTTTCAACTATGAACTACGTAGTTGGTTTTCCATAAATCTATCTGAAGGCAATTTGTATTGCCTTTTCGATGTAGTGGTGAAGTTCCACATTTCTGTCCTGTCTATCTCACCGTTTATGTAAAATTTATGAGCAAAGTATATTTTCCAGGGTCCCAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTCTTTGGTCAACCTCAACTATGATTGAAGATTTTTATCATCTAATTTCTTACTTATGCTCACCCAGACACTACTCGCGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGTCTGTCAAGCTATTTTCTTAAGAGCGAATGTTTTTATTTTATGCCTGGCGTATTTCTGCATGCATAACTCCCTTATGTAAAAATTTAAGTTCACTTGATTTTATTTGCAACTCTAACCTTTTCATTTTATTTTGTTCATGTATTTTTGAAATGCAGGCTTCCAAAAATGACAAAAGCTCTAGTAAGTTGAATATAATGGGCCTTTTCCATCAGAACCCATTTCCTTTTCGAAATTCTTGAAATTTTCATGATTTGTTGATTTCTAATGTACTTGTCAATGCCTTCCAGAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAATTATCCATTCAGAACCAAGTGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGGTCTGTTGTATGAGTTTATGTATCTCTGTGTGTTGTTTGCAATTGCTTGTGCTTTTGTTCATATATGTATGCATTATAAAGTGGATTCCATACAATTTAATTAACAAGATAATGAATGAATCACATGAAAAAGGGAACCGGAACCCTTTCGGTATGTTGTCTGTGGTACTGGTGCTTTCGTTGTGTATACCCATTTCTTTTTTTTCATTTTTCTTTTCTTGATTCTGTTTTGTTTTTTCCCAATTCATGCATTAATTTGTCATTGTGTGTAATGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGATTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTTAGTGGTACTGGTCTTTTCACTCAATTTAATGCACTATATAATACATATATGATCTGGCAAAAGATTTAATGGTTGGTTTCTGATATTAGGGAACATTGAATCCACTTTTTTAGTCTAGTGGCCTGTTAATTTGTGCACTAAAATATGTTATGAGTAGACTAAACTGTGCCCTTTTGGGTTACGG

mRNA sequence

ACTTGCGCTCTCATTCACGCTTCGAAACGGCGTTCGTACTCCCCATTTACACGACGAGCATCGCCGTTCCCGACTGAAGAAAAGATTGACGCAGCAGCTATTCCGAGTTCACAACAAGATCTCTCCGCCATCGTCTTTCTCATACGCCGCAACATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAGCCCGTTCAAGCTCCTCAGGGTTACTCCTATTCTGCTCCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCTTATGGTTCTTCTATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCCCCGATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCCAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGACACTACTCGCGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGCTTCCAAAAATGACAAAAGCTCTAAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAATTATCCATTCAGAACCAAGTGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGATTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTTAGTGGTACTGGTCTTTTCACTCAATTTAATGCACTATATAATACATATATGATCTGGCAAAAGATTTAATGGTTGGTTTCTGATATTAGGGAACATTGAATCCACTTTTTTAGTCTAGTGGCCTGTTAATTTGTGCACTAAAATATGTTATGAGTAGACTAAACTGTGCCCTTTTGGGTTACGG

Coding sequence (CDS)

ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAGCCCGTTCAAGCTCCTCAGGGTTACTCCTATTCTGCTCCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCTTATGGTTCTTCTATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCCCCGATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCCAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGACACTACTCGCGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGCTTCCAAAAATGACAAAAGCTCTAAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAATTATCCATTCAGAACCAAGTGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGTGA

Protein sequence

MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ

Homology

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BLAST of IVF0013349 vs. ExPASy Swiss-Prot
Match: Q8GZ43 (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana OX=3702 GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 3.0e-119
Identity = 211/290 (72.76%), Postives = 235/290 (81.03%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQ 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS Q   +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

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BLAST of IVF0013349 vs. ExPASy Swiss-Prot
Match: Q9AST1 (Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702 GN=TAF15 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 29/59 (49.15%), Postives = 33/59 (55.93%), Query Frame = 0


Query: 168 GPGAMGPRPGFFPDEMSQKKGADT--TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPG 225
           G GA G  PG       Q  GA T     NDWACP CGN+N++ R  CN+  CNT KPG
Sbjct: 182 GGGADGGAPG------KQPSGAPTGLFGPNDWACPMCGNVNWAKRLKCNI--CNTNKPG 232

[Close]

BLAST of IVF0013349 vs. ExPASy TrEMBL
Match: A0A5D3CW31 (RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002320 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 8.4e-165
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. ExPASy TrEMBL
Match: A0A5A7SU69 (RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001830 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 8.4e-165
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. ExPASy TrEMBL
Match: A0A0A0KPV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589330 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 8.4e-165
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. ExPASy TrEMBL
Match: A0A1S3BE27 (ranBP2-type zinc finger protein At1g67325 OS=Cucumis melo OX=3656 GN=LOC103488879 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 8.4e-165
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. ExPASy TrEMBL
Match: A0A6J1DCL2 (ranBP2-type zinc finger protein At1g67325 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019793 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.5e-158
Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSS+YPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNY 
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYS 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PP++DRYGMALPMGP  MGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+M QKK ADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPE
Sbjct: 181 DDMGQKKIADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. NCBI nr
Match: XP_004135329.1 (ranBP2-type zinc finger protein At1g67325 [Cucumis sativus] >XP_008446027.1 PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis melo] >KGN51665.1 hypothetical protein Csa_008826 [Cucumis sativus])

HSP 1 Score: 592 bits (1527), Expect = 7.54e-214
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. NCBI nr
Match: TYK15732.1 (ranBP2-type zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 592 bits (1527), Expect = 1.98e-213
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. NCBI nr
Match: KAA0034188.1 (ranBP2-type zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 592 bits (1527), Expect = 4.32e-213
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. NCBI nr
Match: XP_038893077.1 (ranBP2-type zinc finger protein At1g67325 [Benincasa hispida])

HSP 1 Score: 581 bits (1497), Expect = 2.83e-209
Identity = 277/285 (97.19%), Postives = 282/285 (98.95%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNY 
Sbjct: 61  AKPIQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYS 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D++SQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQ  KNDKSSKQKTPE
Sbjct: 181 DDISQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGIKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. NCBI nr
Match: XP_022151945.1 (ranBP2-type zinc finger protein At1g67325 isoform X2 [Momordica charantia])

HSP 1 Score: 572 bits (1473), Expect = 1.29e-205
Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSS+YPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNY 
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYS 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PP++DRYGMALPMGP  MGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+M QKK ADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPE
Sbjct: 181 DDMGQKKIADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ 285

[Close]

BLAST of IVF0013349 vs. TAIR 10
Match: AT1G67325.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 434.1 bits (1115), Expect = 8.6e-122
Identity = 211/289 (73.01%), Postives = 235/289 (81.31%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQK 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGSQ   +DK SKQ 
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQGGSSDKISKQN 240

Query: 241 TPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
            PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 APEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 287

[Close]

BLAST of IVF0013349 vs. TAIR 10
Match: AT1G67325.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 429.5 bits (1103), Expect = 2.1e-120
Identity = 211/290 (72.76%), Postives = 235/290 (81.03%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQ 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS Q   +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

[Close]

BLAST of IVF0013349 vs. TAIR 10
Match: AT1G50300.1 (TBP-associated factor 15 )

HSP 1 Score: 49.3 bits (116), Expect = 6.0e-06
Identity = 29/59 (49.15%), Postives = 33/59 (55.93%), Query Frame = 0


Query: 168 GPGAMGPRPGFFPDEMSQKKGADT--TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPG 225
           G GA G  PG       Q  GA T     NDWACP CGN+N++ R  CN+  CNT KPG
Sbjct: 182 GGGADGGAPG------KQPSGAPTGLFGPNDWACPMCGNVNWAKRLKCNI--CNTNKPG 232

The following BLAST results are available for this feature:

BLAST of IVF0013349 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ43	3.0e-119	72.76	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
Q9AST1	8.4e-05	49.15	Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of IVF0013349 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CW31	8.4e-165	100.00	RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SU69	8.4e-165	100.00	RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0KPV4	8.4e-165	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589330 PE=4 SV=1	[more]
A0A1S3BE27	8.4e-165	100.00	ranBP2-type zinc finger protein At1g67325 OS=Cucumis melo OX=3656 GN=LOC10348887...	[more]
A0A6J1DCL2	1.5e-158	95.79	ranBP2-type zinc finger protein At1g67325 isoform X2 OS=Momordica charantia OX=3...	[more]

BLAST of IVF0013349 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135329.1	7.54e-214	100.00	ranBP2-type zinc finger protein At1g67325 [Cucumis sativus] >XP_008446027.1 PRED...	[more]
TYK15732.1	1.98e-213	100.00	ranBP2-type zinc finger protein [Cucumis melo var. makuwa]	[more]
KAA0034188.1	4.32e-213	100.00	ranBP2-type zinc finger protein [Cucumis melo var. makuwa]	[more]
XP_038893077.1	2.83e-209	97.19	ranBP2-type zinc finger protein At1g67325 [Benincasa hispida]	[more]
XP_022151945.1	1.29e-205	95.79	ranBP2-type zinc finger protein At1g67325 isoform X2 [Momordica charantia]	[more]

BLAST of IVF0013349 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67325.1	8.6e-122	73.01	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G67325.2	2.1e-120	72.76	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G50300.1	6.0e-06	49.15	TBP-associated factor 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 195..221 e-value: 2.0E-4 score: 30.7 coord: 241..267 e-value: 1.1E-4 score: 31.6 coord: 24..50 e-value: 0.014 score: 24.5
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 239..269 e-value: 1.6E-6 score: 27.3 coord: 22..44 e-value: 1.6E-6 score: 27.3 coord: 194..223 e-value: 9.9E-6 score: 24.8
None	No IPR available	GENE3D	4.10.1060.10		coord: 14..54 e-value: 3.9E-11 score: 44.0 coord: 184..225 e-value: 2.1E-11 score: 44.9 coord: 231..271 e-value: 9.1E-9 score: 36.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..25
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 5..276
None	No IPR available	PANTHER	PTHR23111:SF35	OS08G0521400 PROTEIN	coord: 5..276
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 233..270
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 188..225
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 17..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013349.2	IVF0013349.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding