IVF0013316 (gene) Melon (IVF77) v1

Overview


Name	IVF0013316
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	E3 ubiquitin-protein ligase RNF170
Location	chr03: 16857298 .. 16864947 (+)
RNA-Seq Expression	IVF0013316
Synteny	IVF0013316

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTACTTAAAAATAAATCAGCACCGTGAAGGCATCCCAAGAAACGCGCCTCAGCTTTGAACTTCGAAGTCACAATCATTCTCTTTCTACATCAAATTTCGATTAACACTTTGGCAATTTGGAAGACTTTGATTCTTAATATGGACGGCCCCCCTGCGGGCGATATCTGTTCAATCTGCCATGGAAGATTCAACATCCCTTGTCAAGCAAATTGTTCGCACTGGTTCTGCGGTTGATTCTCTTTCTTCAATTCATTTTCCCTTTTGATGCTGCTTTTTTTATAATTTCATCTCTCTTGAATGATTCTGTTCCTCTATTTCATTTTCGTATTTCATTTAGTTGCAACTGTCGACTAGGTTTGTTTCTTGGAATTTGGAATGTGGTTGCTGTTTGTTCCTTTGTCCTGATTAGTCACCTTAATCACGGCTTAGTTTGTAGTCTCTTCGAGCTATTTTTTTACCGATGGATAAGTCTTGGATGAAACTTCTGTTTCTCGGTAGTGTGTTCTCGAACCTCTGCATTTCAACAAATGGTCAAATGAAACCAAAATCTGAAATAGAAGTTGAGATTGAATTGCATCTCTTTGAGATTATTTGCTTCCAGCTGGAAATAACTGCCTAAATGATTGAGGGTGGACACTGGAGTTAATCCCGTTCAATTAAGACAGGGTTTATCTAGTTTTTGGATCAGAAAAGGAACTTCATGGTCTCCTTTTCAACTTTGGGAACTTGTTGTGTAAGAACTGCATTAAATCATGAGATATGCATGAACTTTTTGAATGTTGGAAGACAAAGTTCTGCTTACTAGTTGTCTTAATATCCCTTTTATGAGATTTGTTTGTAAAATATTTAAACAAAAGAAAAGGACATGTCCATCTATGAAGCTCACTGCATTTTCTGCTTCCCTGTATTGTAGGTAAGTGTATAATGCTTGTCTGGGATCATGGATCACCACTACAGCCATGCAAATGCCCCTTATGTCGTCGTTCAATCACTTTATTAGTTCCTTCGGAGGTTTCACCAATTCAGCAAAGTGACCCAGAGGTTGCACGCGTTCTTAACAATATTAGGACTTATAATCGTCATTTCGGTGGCAACTCAACTGATTTAAGTCAGGTATTTCTCTTTCTTACATAATTTCTGTGATGAACTGCTAGTTAAAAGTGATTGTTGAATACTCTTTGGAACATGAAAAAGTATTTTCCATGAAAAATTGACCATAGAGAGTGAGCATTTATTTGCTAGGGCCGGAAGAAGGCAGGAAGCATTATTCCATGTCCAGTGAGAACAATTAGGACCAAGAAACTGAAGTTAATGGCCTAGATATGTCTCCTCGTATGAGAAGTTAATGATAGTTTCATCAACAAATGGAAGGTAGGAATTAGGAAATGACATTGGACATAGCATGCTGATTATTCCCCAATTCAAAGCCTATAGTCTAAGTTCTGTTTTCAGCGAGATTCAACATTCTACTAAGGCAATTCAACACAAGAATAATGAATAAAAAGGAAAGAGGATAATGGGGCACCTTGCCCAAGCAAACACTCTTCTCCACAAGGGCTACTACCCGATTTCCCCCTAACATACCATCATTCCCTGCCACATGTACTCTCAAATCATGTCCCACTTCTCTAACTAACCATCAGGTGTACCAATTCCCTTTCTGCCCCTCCTACTATAAGTTTTTGTCACTTGGGGCCTTACATTTTTCTTTGATGGTAATGGATAAATTAGCTGAAGAGAGACGGTCTCTAATCTACTAGAATATTGTTGATAATGTCCTAATCAGCTTCATTGTAATCCTTCCATTTTTTTTCTGCTTCCACTCATCAAATAATTCATATGCAATAAGAGATGCATTGATTTGATGACCGATTCCAAAAATGGATTGATTCTCTGTGATGGTGGATGGAAGAACTTGTTTAGTCTCTCTAATATATCTCTAGGAATGATCTTATAGAGAAAAGTGGTGAGGTGAATGGCCTAAACCTACTGATTTGGCATCAGTCTTTTTGGGGATGAGGCAGAGGCAAGCTTCGTTGAGGCTAGCATTGGTAATATCATTCTCAGAAAAATCATTGAACACCCTCTTAATGCCATCCTTGAATGTGTTCCAGGAGATTTTTTATTGAACAAATCATACACTACGAATTTTCTCATCTGAGAAAGGGAGTTCCAGCATCGTGCTTGTAATGGGGCTGCAATTAATGGAGTGTGGGAGAAATCTGTTACTAACTTTTTGAGAACAAAATTGGTGGTAAAAATCAACAAAAGACTTTTACAAACTCAGCTTCTATGTCACTGGCAGCAAGGACACTAACCATTCTGTAAGGGTGTGCTTGGCTCAAGGAGTTTGGAAGTAGGAGTTGAGAAGTAGGGATTTTTGAACACCGCTCCTTGTTTAGTCTAAGGAGTTTGTGAGTCTCACCACTAAAAGACATCAATTTTATACCTTATCAACTTCGTACATTGTGGGCTCTAGGAGTTCACAACTCGTAAACTTCATAACTCTTTACTTTTCATTATTTAACTCTTTACCCGAAACACCCCCTAGAGGATTGGGGAAATTGTCAGAGCTAGTAGCTATTCGCCTGTGGATGTTATAATATCTAAAGGCCCATTTTACTCATTTAAGTCCATGACTTATTATGCACTATCTGAAGCTGACTTTTGTAATTAGAGTCACTGGATGAATTCCAGTCCCTGAGAGATAATTTCAGGCATTTCAATTTCTGCATAAAACCACGATCCTTCAAATCCACCATGCTGTTTTTGGTTCACCAATGTTTCAACATCAGAACAGAATCATAATGTGTTTCAGCCACGTATTAGCAAATTTAAATGAAGTAGGACCCCCTTTCTCATCTCCAGCCTGTAGGTAAATGGGAAAACTTTTTTAGGCAATTTGTTCCAGCCTTTTAACCAATAGAAACTCAAATTTAGATAAGATTCCATCCGAAATGAGAAATTTATCAATAAAGGTGTGAGAACCAAATTCTCTGCTACTGTACCATGTGAGAGGACTTTTTTGCAGTGGCAGTAAAGTGATTAATAGGATACTGATAGAACACCACTTCCTAACAAGAACTAAAATCTGAAATATATCGAGAATTAATGAAGAACTACAATATGTGCAAGTTTATGGTACTTGGGACCCCCTCTCTTGAGAATACTATTCAAGACCTAACTACTCAACCACCTCCCCCTTCTTCACTCACCCACTTCTTATTTATAACCACTACTATCAGTATCTGCCTAAATATCTAATTACCCTTATACCCCTAACCCTATACTAATATAGGTATCTAACAGATACATGGCTCTACAAATCCACTTCCCTTTACTATCAACATTGAAGTCTTCACTGAGGACCTAGTTATTGCCACAGGTACGATTAAACATAAAGCTCTTGCCAACAAGAAACACGGTTAGATGATGAAGATGGGCCATAAATACCTGATGACTAAAAACTAAAATCATCAGCCAGATTTATGCAGAGGGAAAGGGTTTATGCACCTTTAATAGCATCCAAAACACCAAAAGATGGATCATTCCAAAGGATGAGAATACCACCAAAGAGCTTACAACATTTAATGGAAGACCAACCAACATTCTTAGAATTCCAAAGTGACTTAATGAATCTCTTATTGATAGAGGATTATTTAGTTTCCTGAAAAATTAACGTAGCAGGATTAAGTCTGCAAATAATAAAATCTTCAATAATAAATGCTTTATTCTTCCAAGACCCCAAGCCTAAAAAGATAATTTAGATGAAGACAATGTATCCTTTCCATGGCTGTATCTTGGGTTGTCAATTAACTGTGGAGTTATTCTTAACTTGAAGTGACCTTTTTGCTATCTATTCTTATTCCTCATACACTTTTCTGGGAGCCTCTTGAATATTCTGTCTTTGAGTGTTGTCAACCTACACGAAGGAGGTAGGAAATGTGAAGCTGAAAGTCTTCTTTTGGAAATTGCACATTTTGACAATAAATCAGAATTGAATGCTTTGTCGACTCATGAGCTTGAACATCTTTCGTATGCAAAAAGTGAGCTTATGGATCTTTATTTGGCTGAGGAGAGAAACATGATTCTTCGATTTTCAATGGCTCAAAGTAGGTGAGGAAAATACAAAATTCTTCCACTGTTTTTTGGCAGAAAAGAAAAGGAAAATGTTAATTTCAGATTTTTGTTCTTCAGATGGTTGCTTTATTTTGTTTGTTTAGAGGCATTAAAGTTCAAATTCTTGTCTTTTTCAAATCGTTATATCAAAAATTTCCTGTGGTTTTTCTCCAGATCTTTCAATGGCCATGTTCTTCAGTTACTATTGGCTCGCCATGGACTCCAAAGTTCAAAGTTTCATGAGTTAATGCAATTAACGTTTTTTCTGAATTTTGGATGAAAAGGTTTCAACGGATCTATCTCTTGGTTTGAATGTGTTAGGTTACCCACAAATATCACTAAATGACCCAAACTTTAATGGCAAGAAAAACAGAGAAAGCCTCTGTTGTTATTTATTTATATTGCCAAATACAGTCATAAGCTTTAACAACAAGAAAGAACATTCACAAGCAAGGAAATAACAATCAAAACATACCAACTTGTAGCCTACTCTAGGGTAACCCTCGGCCACAGCAGCCGCCCTCTCCAGATATTCTTTATCCAAAATAAAACCTACCTACCCAATCCAAAAGGTGCTATATATAGGCTTTTTCCCACATTCTCTCACCCTGGGCCCACACGCACGATCATTTACTTTTTCCTCCCTCATCATTGTTGTCCGGCTGAATCACCATTCTATCCCTCCTCTTATATGTATGTAATATGGGAGGTCTTACAGAATGTTTTGAATTAACCACCTTAAGATTTCTTTCTGGGTTGTTTCTCTAAGACTTTTGTTGATTTTTCATTATAGGATATATGTCTTGTTAGAAAGAGCGGACTTGTTGTATATTGAAAGTCCGAGGGTTTGTTGAGATTTTATAGTGTCCTAATTATCTTTTATTATTTTATTTTGGCTTCTACAGCCTATAAATAAATATTCCCTGTATCATTATGAGATATAGAAAAATACTAAGAAAATAGCATCATGGGTTTTCTCCCGGTTCTAGGATTTTCATGTAAAACCGGTGTTTGTTCTTCTCTTTATTTTTCAATATGTCTAAACTGGATTGAATTCTTTCATCTTTTGTTATTTATACTTCTTTTTAGCTTTCTTTTATTATTTTTATTTTCCTCCCAGTGGAGTTCATATCTTTTAACCCTCAGTCTCTTTTCGTTTCTTCAGTAAAATGTTTTTATTCTTATTTAACAGAAAAGGAAAAGGAAAAAACAAAAGAAGAAAAGAAAAGCAACAAAAGAGAACATCCTAGGGGCAGGAATAGAGGAGAAGCCTGCTCAATGAAGTATCATTAGCTTTCCCGTCATTAGTGATCATTAGAAAAACAGTTATTACAAAAGAATTTGGGATGGTTTTAGCACCACCACAAGGTGGTAAGTTTCATGCTATTAGAGGGTTTAAAAGTTTCTTTCCGTCGGAGGCCTTCAAGTGTGCAATTTCAAAGGATTTGGGTCTTTCATTTGAGATTCCAACCTCTTATTGTTGAAATACTCTATTTTCTAGACATACTGATATATGCACTGCATTTTGCATCTAGGCTATTGAAAGTTTTATTCTTAAAAATATAGGGTGTAGTATGTTAACAGGGAGCTATTTTTTGAGTCGATATTTGCACTAAGAAAAAGCAATGATCTCTGATGTTTTTTAGAGAAACTTGTTAAAAAAACAAATTCATTGAACTAATAGTTTCAATCAATTTATGTATCTTTTTGACTAAGAAGAGCTCAATTCCTTTTAGCTAATTAAATCACAAAAACCCAAATTCCCCTCTAGCCTGGATCTAATTTTTTAGAACCTTCAGGGATCGTTTGGTTTATGGGTAAAGAGAGTGGGAATGAGTATTTTTTTACCTTGGAAAAGATATTTTCCAGGGTTTATTATTCAACACAAGAGGAGGATTTTCAATCTTGTTGAGAAGCAAAGGCTTGCAATTTCTTCCCTCAAACTCGGGGTGATCTCATAGGAACTTTGCCCTGAGTTTTAAAATCTAAGTTCTTTTGTTTTCATTCCGGGGCATCTCAGGGCAACTTTGCCCCAAGTTTTAAAACATTTTCCTTCAATTTTTTCATTTCAGGGCATCTCGAGAAAACTTTGCTCCGAGTTTTAAAATCTAAATCCTTTTTTTCATCTTGGGGCATCTCGAAGGAACTTTGCCAGGAGTTTGTCCCTCGGTTATTTATTTATTTATTATTTATTCCATACATTCTTAATACCATTCACATGTACAACGAAACATAGACATTCTTAATTCCCAGCAATCTTATTCCCAGGCATCATTAATTTCGAATAATGTTATTTCCATTTCAACTCCCTCATCCAAATGGTCCCTAATGGGGATTTTGGTAATCTGTTGTGGTAGTTATCGTGTATGTATGGTTTGTTGAAATGGTATTTACAGAACAGAATGTTATTAGTTTAGATTATTAATTTATTTATTACCTAAAATCTAACTATGAGATGTTTACAAGTGCAAAAAAATTTATCTTCCTTACCGTCTATATAGAATCTGAGGGGATTAGTGATAGAAACTAATACAAGTCTATCATTGATAGACTAGACTAGTCTATTAGTATCTATCAGCTATAGAAATTGATAGACTGGTAGAGGCCGATAGAAGTCTAATGTCTATCAGTGATAGAAACTGATAGAAGTTTATCATTGATAGAAAGTGATACAAGCCTATCACTAGTAGAGGTTGATAGAAGTCTATCAGTGTTTATGAATACTCCTTTTTCTACTTTTATAAATAGTTTGACATATTTTCTATTTGTGAAAATTTCTCATAAATTTACTTACAATAATTATTTAATAAATCAATATTCAGAGTTATTTAATGCAGCCTAAGATACTGAACTGCGTTTTTCTCTTCTCTACAGCGGCTGCAGGACCTTCCTTTTCTCCTGCGGAGGTTGCTTCAAGAACTCCTCAATCCACAGAGATCTCTTCCTCTTGTCATTAGAACACGTGTTTACATTGCAGTTAAGTCAATGCCTCAACCCAACTTTCTCAACATCAACTACTGCTTATTTAAGTTATTTTAAATTAAAATTAACTTGTAAATATCCTCTGTTTTTATTGTTCTTTTATTTATCAAATGAAAAAATTGCTTTCCCATAAGAAGTCTGAACAATCAAGAGAGACATTTCTGGTTGATTGAATGTCATTATAACTGCTGTAATTTGTAATTTGTTTACAGATGGTTCTAAGTGTAGTCTACACTGTGAGTCCCATCGATATCATACCAGAAGGTAATATATATATATATATATAGATATAGATATATTTTTCGACCCAGATACCTGTTTGTACTTTCTGTTGGTTTATTGGTTTCTTATGAATTTGTTTTTTCTGGCTCGACTGTTTATGTGCAGCATTACTAGGATTATTTGGACTGATGGATGATATCCTTATACTGCTCATCTGCTTCCTTTACATTGCTGCTATGTACCGATCAGTACTTTATAATCGTCACGGAGGAACTTGAACTTCTTTGACAGCTTTTCCAAGACCTGTTAGAAATCAGAGTAGCCA

mRNA sequence

AATTACTTAAAAATAAATCAGCACCGTGAAGGCATCCCAAGAAACGCGCCTCAGCTTTGAACTTCGAAGTCACAATCATTCTCTTTCTACATCAAATTTCGATTAACACTTTGGCAATTTGGAAGACTTTGATTCTTAATATGGACGGCCCCCCTGCGGGCGATATCTGTTCAATCTGCCATGGAAGATTCAACATCCCTTGTCAAGCAAATTGTTCGCACTGGTTCTGCGGTAAGTGTATAATGCTTGTCTGGGATCATGGATCACCACTACAGCCATGCAAATGCCCCTTATGTCGTCGTTCAATCACTTTATTAGTTCCTTCGGAGGTTTCACCAATTCAGCAAAGTGACCCAGAGGTTGCACGCGTTCTTAACAATATTAGGACTTATAATCGTCATTTCGGTGGCAACTCAACTGATTTAAGTCAGCGGCTGCAGGACCTTCCTTTTCTCCTGCGGAGGTTGCTTCAAGAACTCCTCAATCCACAGAGATCTCTTCCTCTTGTCATTAGAACACGTGTTTACATTGCAATGGTTCTAAGTGTAGTCTACACTGTGAGTCCCATCGATATCATACCAGAAGCATTACTAGGATTATTTGGACTGATGGATGATATCCTTATACTGCTCATCTGCTTCCTTTACATTGCTGCTATGTACCGATCAGTACTTTATAATCGTCACGGAGGAACTTGAACTTCTTTGACAGCTTTTCCAAGACCTGTTAGAAATCAGAGTAGCCA

Coding sequence (CDS)

ATGGACGGCCCCCCTGCGGGCGATATCTGTTCAATCTGCCATGGAAGATTCAACATCCCTTGTCAAGCAAATTGTTCGCACTGGTTCTGCGGTAAGTGTATAATGCTTGTCTGGGATCATGGATCACCACTACAGCCATGCAAATGCCCCTTATGTCGTCGTTCAATCACTTTATTAGTTCCTTCGGAGGTTTCACCAATTCAGCAAAGTGACCCAGAGGTTGCACGCGTTCTTAACAATATTAGGACTTATAATCGTCATTTCGGTGGCAACTCAACTGATTTAAGTCAGCGGCTGCAGGACCTTCCTTTTCTCCTGCGGAGGTTGCTTCAAGAACTCCTCAATCCACAGAGATCTCTTCCTCTTGTCATTAGAACACGTGTTTACATTGCAATGGTTCTAAGTGTAGTCTACACTGTGAGTCCCATCGATATCATACCAGAAGCATTACTAGGATTATTTGGACTGATGGATGATATCCTTATACTGCTCATCTGCTTCCTTTACATTGCTGCTATGTACCGATCAGTACTTTATAATCGTCACGGAGGAACTTGA

Protein sequence

MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYNRHGGT

Homology

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BLAST of IVF0013316 vs. ExPASy Swiss-Prot
Match: Q7SZN2 (E3 ubiquitin-protein ligase RNF170 OS=Danio rerio OX=7955 GN=rnf170 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 69/180 (38.33%), Postives = 103/180 (57.22%), Query Frame = 0


Query: 10  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVP----SEVS 69
           C +C  +  +P + NC H FCG CI+  W +G+ L    CP+CR+ +TLL P    SE S
Sbjct: 88  CPVCLQQAVLPVETNCGHLFCGSCIIAYWRYGTWLGAISCPICRQMVTLLFPLFQDSEQS 147

Query: 70  PIQQSDP-EVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVI 129
            +    P E   +L +I  YNR F G    L  RL+D+P LLR   +E+ +    L  + 
Sbjct: 148 AVAADSPVEPTLILTDISDYNRRFSGQPRSLLDRLRDVPTLLRHAFREMFS-VGGLFWMF 207

Query: 130 RTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYNRHGG 185
           R R+ + +  ++ Y VSP+D +PE +LGL G +DD  ++L+ F+YI+ MYR V+  R  G
Sbjct: 208 RVRILLCVCGALAYLVSPLDFLPEGVLGLLGFLDDFFVILLLFIYISIMYREVVTQRLAG 266

[Close]

BLAST of IVF0013316 vs. ExPASy Swiss-Prot
Match: Q5PPX5 (E3 ubiquitin-protein ligase RNF170 OS=Xenopus laevis OX=8355 GN=rnf170 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.5e-28
Identity = 64/172 (37.21%), Postives = 99/172 (57.56%), Query Frame = 0


Query: 10  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQ 69
           C +C  +   P + NC H FCG CI+  W +G+ L    CP+CR+++TLL P   +  Q+
Sbjct: 87  CPVCLQQATFPVETNCGHLFCGSCIIAYWRYGTWLGAINCPICRQTVTLLFPLFGATDQE 146

Query: 70  SDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVIRTRVY 129
              +   +L     YNR F G    L  R+ DLP LLR   +E+ +    L  + R R+ 
Sbjct: 147 ---DAQNILQEATGYNRRFSGQPRSLMDRIMDLPTLLRHAFREMFS-VGGLFWMFRIRIV 206

Query: 130 IAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYNR 182
           + ++ +++Y VSP+DIIPEAL G+ G +DD+ +L +  +YI+ MYR V+  R
Sbjct: 207 LCLLGALLYLVSPLDIIPEALFGILGFLDDLFVLFLLLIYISIMYREVVTQR 254

[Close]

BLAST of IVF0013316 vs. ExPASy Swiss-Prot
Match: F1MK05 (E3 ubiquitin-protein ligase RNF170 OS=Bos taurus OX=9913 GN=RNF170 PE=3 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 6.0e-28
Identity = 62/172 (36.05%), Postives = 99/172 (57.56%), Query Frame = 0


Query: 10  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQ 69
           C IC  + ++P + NC H FCG CI+  W +GS L    CP+CR+++TLL+P  V     
Sbjct: 88  CPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLP--VFGEND 147

Query: 70  SDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVIRTRVY 129
              +V  +  +I  YNR F G    + +R+ DLP LLR   +E+ +    L  + R R+ 
Sbjct: 148 QSQDVVSLHQDISDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFS-VGGLFWMFRIRII 207

Query: 130 IAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYNR 182
           + ++ +  Y +SP+D +PEAL G+ G +DD  ++ +  +YI+ MYR V+  R
Sbjct: 208 LCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQR 256

[Close]

BLAST of IVF0013316 vs. ExPASy Swiss-Prot
Match: Q96K19 (E3 ubiquitin-protein ligase RNF170 OS=Homo sapiens OX=9606 GN=RNF170 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 63/172 (36.63%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 10  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQ 69
           C IC  + + P + NC H FCG CI+  W +GS L    CP+CR+++TLL+       Q 
Sbjct: 87  CPICLHQASFPVETNCGHLFCGACIIAYWRYGSWLGAISCPICRQTVTLLLTVFGEDDQS 146

Query: 70  SDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVIRTRVY 129
            D  V R+  +I  YNR F G    + +R+ DLP LLR   +E+ +    L  + R R+ 
Sbjct: 147 QD--VLRLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFS-VGGLFWMFRIRII 206

Query: 130 IAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYNR 182
           + ++ +  Y +SP+D +PEAL G+ G +DD  ++ +  +YI+ MYR V+  R
Sbjct: 207 LCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQR 255

[Close]

BLAST of IVF0013316 vs. ExPASy Swiss-Prot
Match: Q8CBG9 (E3 ubiquitin-protein ligase RNF170 OS=Mus musculus OX=10090 GN=Rnf170 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 62/172 (36.05%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 10  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQ 69
           C IC  + + P + NC H FCG CI+  W +GS L    CP+CR+++TLL+       Q 
Sbjct: 115 CPICLHQASFPVETNCGHLFCGSCIIAYWRYGSWLGAISCPICRQTVTLLLTVFGEDDQS 174

Query: 70  SDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVIRTRVY 129
            D  V R+  ++  YNR F G    + +R+ DLP LLR   +E+ +    L  + R R+ 
Sbjct: 175 QD--VIRLRQDVNDYNRRFSGQPRSIMERIMDLPTLLRHAFREVFS-VGGLFWMFRIRIM 234

Query: 130 IAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYNR 182
           + ++ +  Y +SP+D +PEAL G+ G +DD  ++ +  +YI+ MYR V+  R
Sbjct: 235 LCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQR 283

[Close]

BLAST of IVF0013316 vs. ExPASy TrEMBL
Match: A0A1S3CIS2 (E3 ubiquitin-protein ligase RNF170 OS=Cucumis melo OX=3656 GN=LOC103501307 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.5e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV
Sbjct: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL
Sbjct: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN
Sbjct: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180

Query: 181 RHGGT 186
           RHGGT
Sbjct: 181 RHGGT 185

[Close]

BLAST of IVF0013316 vs. ExPASy TrEMBL
Match: A0A6J1EVH0 (E3 ubiquitin-protein ligase RNF170 OS=Cucurbita moschata OX=3662 GN=LOC111438431 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.6e-92
Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPPAGDICSICHGRFN PCQANCSHWFCG+CIMLVWDHGSPLQPCKCPLCRR ITLLV
Sbjct: 1   MDGPPAGDICSICHGRFNTPCQANCSHWFCGRCIMLVWDHGSPLQPCKCPLCRRQITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSE S  QQSDPEVARVLNNIR YNRHFGGNST L+QRLQDLPFLLRRLL+ELLNPQRSL
Sbjct: 61  PSEASATQQSDPEVARVLNNIRNYNRHFGGNSTGLNQRLQDLPFLLRRLLRELLNPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIR RVY AM LSVVYTVSPIDIIPEALLGLFGLMDD  ILLICFLY+AA+YRSVL+N
Sbjct: 121 PLVIRARVYTAMFLSVVYTVSPIDIIPEALLGLFGLMDDAFILLICFLYVAALYRSVLHN 180

Query: 181 RHGGT 186
           RHGGT
Sbjct: 181 RHGGT 185

[Close]

BLAST of IVF0013316 vs. ExPASy TrEMBL
Match: A0A6J1I9X5 (E3 ubiquitin-protein ligase RNF170 OS=Cucurbita maxima OX=3661 GN=LOC111471404 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 166/185 (89.73%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPPAGDICSICHGRFN PCQANCSHWFCG+CIMLVWDHGS LQPCKCPLCRR ITLLV
Sbjct: 1   MDGPPAGDICSICHGRFNTPCQANCSHWFCGRCIMLVWDHGSTLQPCKCPLCRRQITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSE S  QQSDPEVARVLNNIR YNRHFGGNST L+QRLQDLPFLLRRLL+ELLNPQRSL
Sbjct: 61  PSEASVTQQSDPEVARVLNNIRNYNRHFGGNSTGLNQRLQDLPFLLRRLLRELLNPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIR RVY AM LSVVYTVSPIDIIPEALLGLFGLMDD  ILLICFLY+AA+YRSVL+N
Sbjct: 121 PLVIRARVYTAMFLSVVYTVSPIDIIPEALLGLFGLMDDAFILLICFLYVAALYRSVLHN 180

Query: 181 RHGGT 186
           RHGGT
Sbjct: 181 RHGGT 185

[Close]

BLAST of IVF0013316 vs. ExPASy TrEMBL
Match: A0A6J1DFH0 (E3 ubiquitin-protein ligase RNF170 OS=Momordica charantia OX=3673 GN=LOC111019617 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 9.2e-88
Identity = 160/185 (86.49%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPPAGD CSICHG FNIPCQANCSHWFCG CIMLVWDHGS LQPCKCPLCRR ITLLV
Sbjct: 1   MDGPPAGDFCSICHGSFNIPCQANCSHWFCGSCIMLVWDHGSSLQPCKCPLCRRQITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSE S  QQS+PEVAR+LNNIRTYN HFG NS  L QR+QDLPFLLRRLL+ELL+PQRSL
Sbjct: 61  PSEASARQQSNPEVARILNNIRTYNHHFGDNSAGLIQRMQDLPFLLRRLLRELLDPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIR RVYIAMVLSVVYT+SPIDIIPEA+LG+FGLMDDI ILLICFLYIAAMYRSVLY 
Sbjct: 121 PLVIRARVYIAMVLSVVYTLSPIDIIPEAMLGVFGLMDDIFILLICFLYIAAMYRSVLYY 180

Query: 181 RHGGT 186
           RHGG+
Sbjct: 181 RHGGS 185

[Close]

BLAST of IVF0013316 vs. ExPASy TrEMBL
Match: A0A2I4FPN8 (E3 ubiquitin-protein ligase RNF170 OS=Juglans regia OX=51240 GN=LOC109000985 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75
Identity = 135/185 (72.97%), Postives = 158/185 (85.41%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPPA D CS+CH  F  PCQANCSHWFCG CIMLVW HGS LQPCKCPLCRR ITLLV
Sbjct: 1   MDGPPANDFCSVCHSNFKFPCQANCSHWFCGDCIMLVWHHGSALQPCKCPLCRRQITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           P E S  Q+ DPEVA +L  ++TYNR FGG++  L QR+QDLPFLLRRLL+EL++PQRSL
Sbjct: 61  PGEASLSQRHDPEVAEILGKVQTYNRLFGGHANGLFQRMQDLPFLLRRLLRELMDPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIR RVYIAM+LSVVY VSPIDIIPE +LG+ GL+DD+LI+LICFL++AA+YRS+L+ 
Sbjct: 121 PLVIRARVYIAMLLSVVYVVSPIDIIPEGILGIVGLLDDLLIVLICFLHVAAIYRSILHF 180

Query: 181 RHGGT 186
           RHGG+
Sbjct: 181 RHGGS 185

[Close]

BLAST of IVF0013316 vs. NCBI nr
Match: XP_008463070.1 (PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Cucumis melo])

HSP 1 Score: 377 bits (968), Expect = 5.79e-132
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV
Sbjct: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL
Sbjct: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN
Sbjct: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180

Query: 181 RHGGT 185
           RHGGT
Sbjct: 181 RHGGT 185

[Close]

BLAST of IVF0013316 vs. NCBI nr
Match: XP_031743956.1 (E3 ubiquitin-protein ligase RNF170 isoform X5 [Cucumis sativus] >KAE8646587.1 hypothetical protein Csa_005542 [Cucumis sativus])

HSP 1 Score: 369 bits (947), Expect = 9.23e-129
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPP GDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPL PCKCPLCRRSITLLV
Sbjct: 1   MDGPPVGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLHPCKCPLCRRSITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLL+EL NPQRSL
Sbjct: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLRELHNPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIRTRVYIAMVLSV+YTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN
Sbjct: 121 PLVIRTRVYIAMVLSVIYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180

Query: 181 RHGGT 185
           RHGGT
Sbjct: 181 RHGGT 185

[Close]

BLAST of IVF0013316 vs. NCBI nr
Match: XP_038884720.1 (E3 ubiquitin-protein ligase RNF170-like isoform X2 [Benincasa hispida] >XP_038884721.1 E3 ubiquitin-protein ligase RNF170-like isoform X2 [Benincasa hispida])

HSP 1 Score: 359 bits (921), Expect = 8.52e-125
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPP GDICSICHGRFN PCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRR ITLLV
Sbjct: 1   MDGPPVGDICSICHGRFNTPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRQITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSEVSPIQQSDPEV RVLNNIRTYNRHFGGNST LSQRLQDLPFLLRRLL+ELLNPQRSL
Sbjct: 61  PSEVSPIQQSDPEVERVLNNIRTYNRHFGGNSTGLSQRLQDLPFLLRRLLRELLNPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIRTRVY AMVLSVVY VSPIDIIPEALLGLFGLMDDI ILLICFLYIAA+YRSVLYN
Sbjct: 121 PLVIRTRVYTAMVLSVVYAVSPIDIIPEALLGLFGLMDDIFILLICFLYIAAIYRSVLYN 180

Query: 181 RHGGT 185
           RHGGT
Sbjct: 181 RHGGT 185

[Close]

BLAST of IVF0013316 vs. NCBI nr
Match: XP_022932121.1 (E3 ubiquitin-protein ligase RNF170-like [Cucurbita moschata] >XP_023524452.1 E3 ubiquitin-protein ligase RNF170-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6607576.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346 bits (887), Expect = 1.30e-119
Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPPAGDICSICHGRFN PCQANCSHWFCG+CIMLVWDHGSPLQPCKCPLCRR ITLLV
Sbjct: 1   MDGPPAGDICSICHGRFNTPCQANCSHWFCGRCIMLVWDHGSPLQPCKCPLCRRQITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSE S  QQSDPEVARVLNNIR YNRHFGGNST L+QRLQDLPFLLRRLL+ELLNPQRSL
Sbjct: 61  PSEASATQQSDPEVARVLNNIRNYNRHFGGNSTGLNQRLQDLPFLLRRLLRELLNPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIR RVY AM LSVVYTVSPIDIIPEALLGLFGLMDD  ILLICFLY+AA+YRSVL+N
Sbjct: 121 PLVIRARVYTAMFLSVVYTVSPIDIIPEALLGLFGLMDDAFILLICFLYVAALYRSVLHN 180

Query: 181 RHGGT 185
           RHGGT
Sbjct: 181 RHGGT 185

[Close]

BLAST of IVF0013316 vs. NCBI nr
Match: XP_022972895.1 (E3 ubiquitin-protein ligase RNF170-like [Cucurbita maxima])

HSP 1 Score: 342 bits (878), Expect = 3.07e-118
Identity = 166/185 (89.73%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           MDGPPAGDICSICHGRFN PCQANCSHWFCG+CIMLVWDHGS LQPCKCPLCRR ITLLV
Sbjct: 1   MDGPPAGDICSICHGRFNTPCQANCSHWFCGRCIMLVWDHGSTLQPCKCPLCRRQITLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSE S  QQSDPEVARVLNNIR YNRHFGGNST L+QRLQDLPFLLRRLL+ELLNPQRSL
Sbjct: 61  PSEASVTQQSDPEVARVLNNIRNYNRHFGGNSTGLNQRLQDLPFLLRRLLRELLNPQRSL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIR RVY AM LSVVYTVSPIDIIPEALLGLFGLMDD  ILLICFLY+AA+YRSVL+N
Sbjct: 121 PLVIRARVYTAMFLSVVYTVSPIDIIPEALLGLFGLMDDAFILLICFLYVAALYRSVLHN 180

Query: 181 RHGGT 185
           RHGGT
Sbjct: 181 RHGGT 185

[Close]

BLAST of IVF0013316 vs. TAIR 10
Match: AT1G22510.1 (RING/U-box protein with domain of unknown function (DUF 1232) )

HSP 1 Score: 276.9 bits (707), Expect = 1.1e-74
Identity = 125/185 (67.57%), Postives = 158/185 (85.41%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           M+ PP  ++CSICHG FN PCQ+NCSHWFCG CIMLVW HGS L+PCKCPLCRR I+LLV
Sbjct: 1   MNAPPENELCSICHGHFNAPCQSNCSHWFCGNCIMLVWRHGSTLRPCKCPLCRRPISLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSE +   ++D  V+ VL+++ TYNR FGG S+ L QR+QDLPFLLRRLL+E+++PQR+L
Sbjct: 61  PSEETVRSRNDATVSEVLHDVETYNRVFGGQSSGLIQRMQDLPFLLRRLLREMMDPQRTL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIR RVYIA++LS +Y +SPIDIIPE +LG+ GL+DD+LI LICFL++AA+YRSVLY+
Sbjct: 121 PLVIRARVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALICFLHVAALYRSVLYS 180

Query: 181 RHGGT 186
           RHGG+
Sbjct: 181 RHGGS 185

[Close]

BLAST of IVF0013316 vs. TAIR 10
Match: AT1G72175.1 (RING/U-box protein with domain of unknown function (DUF 1232) )

HSP 1 Score: 273.9 bits (699), Expect = 9.7e-74
Identity = 128/185 (69.19%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 1   MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLV 60
           M+ PP  D+CSICH  F  PCQANCSHWFCG CIMLVW HGS LQPCKCPLCRR I+LLV
Sbjct: 1   MNSPPENDLCSICHSHFTAPCQANCSHWFCGNCIMLVWRHGSTLQPCKCPLCRRHISLLV 60

Query: 61  PSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSL 120
           PSE +   ++D  V  VL N+ TYNR FGG S+ L QR+QDLPFLLRRLL+E+++PQR+L
Sbjct: 61  PSEDTIRDRNDATVKEVLGNLETYNRLFGGRSSSLVQRMQDLPFLLRRLLREMMDPQRTL 120

Query: 121 PLVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYRSVLYN 180
           PLVIR RVYIAM+LS VY +SPIDIIPE +LG+ GL+DD+LI LICFL++AA+YRSVLY 
Sbjct: 121 PLVIRARVYIAMILSAVYIISPIDIIPEGVLGVVGLLDDLLIALICFLHVAALYRSVLYF 180

Query: 181 RHGGT 186
           RH G+
Sbjct: 181 RHAGS 185

[Close]

BLAST of IVF0013316 vs. TAIR 10
Match: AT1G22510.2 (RING/U-box protein with domain of unknown function (DUF 1232) )

HSP 1 Score: 219.2 bits (557), Expect = 2.8e-57
Identity = 104/155 (67.10%), Postives = 133/155 (85.81%), Query Frame = 0


Query: 31  GKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGG 90
           G CIMLVW HGS L+PCKCPLCRR I+LLVPSE +   ++D  V+ VL+++ TYNR FGG
Sbjct: 49  GNCIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETVRSRNDATVSEVLHDVETYNRVFGG 108

Query: 91  NSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVIRTRVYIAMVLSVVYTVSPIDIIPEAL 150
            S+ L QR+QDLPFLLRRLL+E+++PQR+LPLVIR RVYIA++LS +Y +SPIDIIPE +
Sbjct: 109 QSSGLIQRMQDLPFLLRRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDIIPEGV 168

Query: 151 LGLFGLMDDILILLICFLYIAAMYRSVLYNRHGGT 186
           LG+ GL+DD+LI LICFL++AA+YRSVLY+RHGG+
Sbjct: 169 LGVIGLLDDLLIALICFLHVAALYRSVLYSRHGGS 203

[Close]

BLAST of IVF0013316 vs. TAIR 10
Match: AT4G33940.1 (RING/U-box superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 3.9e-30
Identity = 63/174 (36.21%), Postives = 101/174 (58.05%), Query Frame = 0


Query: 2   DGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVP 61
           + PP  D+C IC G F +PC+ NC HW+CG CI+  W++ +  +PCKCP+C R IT L P
Sbjct: 66  ESPPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSP 125

Query: 62  SEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLP 121
            E S  ++ + EV  VL+ +R YNR F G  T   Q++ +LPFL++R++  +++   +  
Sbjct: 126 -EPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDTDVNNL 185

Query: 122 LVIRTRVYIAMVLSVVYTVSPIDIIPEALLGLFGLMDDILILLICFLYIAAMYR 176
                R++ AM +S +YT +  + IP     +  + D   I +I  L +  +YR
Sbjct: 186 YFHEVRIF-AMFMSTLYTAAEFNFIPTGGFRIVTVFDYAAIAMILILRLVGIYR 237

The following BLAST results are available for this feature:

BLAST of IVF0013316 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7SZN2	1.1e-29	38.33	E3 ubiquitin-protein ligase RNF170 OS=Danio rerio OX=7955 GN=rnf170 PE=2 SV=1	[more]
Q5PPX5	3.5e-28	37.21	E3 ubiquitin-protein ligase RNF170 OS=Xenopus laevis OX=8355 GN=rnf170 PE=2 SV=1	[more]
F1MK05	6.0e-28	36.05	E3 ubiquitin-protein ligase RNF170 OS=Bos taurus OX=9913 GN=RNF170 PE=3 SV=2	[more]
Q96K19	1.3e-27	36.63	E3 ubiquitin-protein ligase RNF170 OS=Homo sapiens OX=9606 GN=RNF170 PE=1 SV=2	[more]
Q8CBG9	1.3e-27	36.05	E3 ubiquitin-protein ligase RNF170 OS=Mus musculus OX=10090 GN=Rnf170 PE=1 SV=1	[more]

BLAST of IVF0013316 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIS2	6.5e-102	100.00	E3 ubiquitin-protein ligase RNF170 OS=Cucumis melo OX=3656 GN=LOC103501307 PE=4 ...	[more]
A0A6J1EVH0	1.6e-92	90.27	E3 ubiquitin-protein ligase RNF170 OS=Cucurbita moschata OX=3662 GN=LOC111438431...	[more]
A0A6J1I9X5	1.8e-91	89.73	E3 ubiquitin-protein ligase RNF170 OS=Cucurbita maxima OX=3661 GN=LOC111471404 P...	[more]
A0A6J1DFH0	9.2e-88	86.49	E3 ubiquitin-protein ligase RNF170 OS=Momordica charantia OX=3673 GN=LOC11101961...	[more]
A0A2I4FPN8	1.8e-75	72.97	E3 ubiquitin-protein ligase RNF170 OS=Juglans regia OX=51240 GN=LOC109000985 PE=...	[more]

BLAST of IVF0013316 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463070.1	5.79e-132	100.00	PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Cucumis melo]	[more]
XP_031743956.1	9.23e-129	97.30	E3 ubiquitin-protein ligase RNF170 isoform X5 [Cucumis sativus] >KAE8646587.1 hy...	[more]
XP_038884720.1	8.52e-125	94.59	E3 ubiquitin-protein ligase RNF170-like isoform X2 [Benincasa hispida] >XP_03888...	[more]
XP_022932121.1	1.30e-119	90.27	E3 ubiquitin-protein ligase RNF170-like [Cucurbita moschata] >XP_023524452.1 E3 ...	[more]
XP_022972895.1	3.07e-118	89.73	E3 ubiquitin-protein ligase RNF170-like [Cucurbita maxima]	[more]

BLAST of IVF0013316 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22510.1	1.1e-74	67.57	RING/U-box protein with domain of unknown function (DUF 1232)	[more]
AT1G72175.1	9.7e-74	69.19	RING/U-box protein with domain of unknown function (DUF 1232)	[more]
AT1G22510.2	2.8e-57	67.10	RING/U-box protein with domain of unknown function (DUF 1232)	[more]
AT4G33940.1	3.9e-30	36.21	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 10..52 e-value: 0.0037 score: 26.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 10..53 score: 10.497623
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 4..115 e-value: 7.8E-13 score: 50.2
IPR010652	Domain of unknown function DUF1232	PFAM	PF06803	DUF1232	coord: 130..164 e-value: 1.9E-8 score: 33.9
IPR038896	E3 ubiquitin-protein ligase RNF170	PANTHER	PTHR22894	UNCHARACTERIZED	coord: 2..184
None	No IPR available	PANTHER	PTHR22894:SF10	BNAC07G13660D PROTEIN	coord: 2..184
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 8..59
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 25..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013316.4	IVF0013316.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity