IVF0013312 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGTCGAAAATGGATTCCCGGTCCCATCGAACTAAACTCCACGCCACTCTCCACGGCTCCACTTAACCAAGCTGACCAAAGGGTTCTGGCGGGATTGAAGATCGCCGTCCCCGGAGTTCCCCCGTTGCCGTAAACACTGAACTGAGCTTCACAGTCACGTCATTGTCGAAGTTTCATTCATTCATTCTTTGTTTGGTCGTCGCCGAGACATAGAGAATGCAGTCTCTTCCATCAGATACTTGCGTTCTTCGTCCTTATCGATATTCCCTTTCAACCTTCACGCCGCGCACTTCACTTGTAACTTCATCTTCTTCTAACAACCCTCTCAATTCGTCTTTGTCCTCTTTTTCTCTGGTTGGGTTACGTCGTGAATCTTCTTTACTGCTATTCGGCGACCGAATTTGGAATCGGAACCTTTTGTTTGCTCCCAGACCAAACGGAATGATTTTGGATTGTTAGTTCCTCCTCTTCGATGCGAACCGTCATCGAACGGCAACAGCATCCAGGGCGAGCGGAGTTTGATGCAGTGGATTGAATTGATTGGAGAAGCTTTATCTACTGCGTTTCCTGTTTGGGTGGCGCTAGGTTGCGTTTTAGGGCTGCTCAGACCGGCTTCCTATGCTTGGGTTCAACCGAGATGGACTGTTCTTGGCATTACTCTCACAATGCTTGGTATGGCATGACATTGACCCTCGATGATCTTCGTGGAGCCTTGGCTATGCCTAAGGAATTGATTTCTGGGTTCGTTCTCCAGTATTCGGTTAGTTCCTTTGTTTACTGGGATTGTGCTATTGTTTGAACGGATATGAAATTCGTTGATTTTGTTGATCTTGAGAAATTTCTCGTGTATGCTGCATGATTCTGAATGTGTGTGACTTGGGTTTTGGAATATTAGAAGCTGTTCTAGTTCACAGAAGGAGGAAAAGGAACAACAGAAATGACTATGGCCATCAGAAATGTTCCAAAACTCAGCAATGGGTATTGATGTTGAATCATAGCGAGATGAAGAATTACTATTACGAGCTAAATGGAGATTGATTCTTCATCTCTAATATTCCACTACTTCCTTTGAATTGTATGCTAACTGTGTTTCGAAAAGCAGTTCGTTTGGATGAAATCCTTCTATTATTGATCTACTGGTTAGATTTTTCTGAATTTGTACTGAAGAAAACAATTAATAAAAAATAGTGTGACATCGAGGATTTCCACTTCACTTTCTTTGGTAGTTTTAGGAACTTCAATCTATAGATGAAATTATAAGATAGACTTTCATGGTTCTTGGTGCAGGTGATGCCAATATCAGGCTTTCTTGTCAGCAAGCTTTTAAATTTGCCATCTTACTATGCAGCTGGTTTAATATTGGTTGGTTGCTGTCCTGGTGGTATGCATCAGTTGGTAGCGTCAATTATCTTTCTCATTCTATTTATTTTAACAGTTTGATCTATCTTTGGTTTCAGGAACAGCAAGCAATATCGTCACTTACATTGCAAGGTATTCTAATTTTTTGAAATGCCACCATTTAGCTTCTTTCTTGTTAAATTATGTTAGAGGTTAAGAAAAATTTTATGCCTTTCCAGGGGAAATGTAGCTCTTTCCGTGTTGATGACTGCCACAAGCACTATGGCAGCCGTGGTTAGCAAGCCTCCATAATGCTTTTGCTTTTCTCGTTTATTTAGTTTCTAAATTCAAGTTTGCATTTAGCATAGTCTGTTTTTCTTCCAGTTTTATATAGTTCTTCTTTCGTTAAAACAGGACCTAACATCTTTGTTAGTAGAAATGACAACACATAAGAAACCACAGTTTACTCTTAAGTTCATACTTATACAAACATAGGAAAAACCTTAACTGAACACCACAATAAATTTTCATCTACCATGTTACTTTTTCATTCTCTTCAAAGATATCGGTATGATGAGTGTTTGCCGTAGAGATCCCAGTGCTATGATCGAGGAGTCCCTCCTTAATCCGCCTTTTGGAGAGAAAACCCGGTTTCTTTGGCTTGTCGGTGTGTGTGCAGTGTTATGGGTTTTGCGGGATGTGAGGAACAGTAGAGTGTTTGGGGAGTGGAGAGGAACCCTAGGGAGCTTTGGTCCCTTGTTCGTTTTCATGATTTTCTCTAGGCTTCAATTTTGGAGACTTTTGATAATTATTCTATAGGAATGATTTTGCATAGTTGGAGTCCGTTCTTGTAAAGGGTGTCCCTCCTTTTTGTGGGCTTTGTTTCTTTCATACCTGTGCATTCTTTTCCTTTTCTCAATGAAAGTGATTATTTTCGAAGTTTAGATATTGAAGTCTAAGTTATCATTTCAATTTTACAGATCATGACCCCTTTTCTCACTGCCAAACTGGCTGGTCAATTTGTTGCCGTAGATGCAGCTGGGTTGTTAATGTCCACCCTGCAGGTGCAACTTCTAACAAACGAAAGCGATATCAATATTTTTCTAACATTAAATTACTCTCAAGTAACCTCCCTTTCCTTCATATACAACAGATTGTGCTTCTTCCAGTGTTGGGTGGGGCATTTTTAAACCAGTATTTCCATGGCTTGGTTAGATTTGTCTCTCCATTCATGCCCCCTATCGCAGTTGGCACCGTAGCTGTTTTATGTGGACATGCAATTGCTCAGAGCTCCTCTGCTATTCGGATCTCTGGTCAGCAAGTAGTACTGGCTGCAGCTCTTCTTCACGCTTCAGGATTTTTCTTCGGTTATGTGCTTGCAAGATTGCTTGGCATCGACATTGCATCTTCTCGAACGATCTCCATTGAAGTTGGAATGCAGGTAAAGCATTTCATTTAGAATAATTGCAACGGATAGTGCTTTCATGATAAATAATTGAATGTGTAGCAACATGTTAAAAGAACTTTAAATATGGGAAAAATCTATTAATGATAAACATTTATTAGCAATATAGACTATGGTAGACTTTGAGAACTGATTCATTGTGTTATATTTGTAAATTGTTTTGGATTGTGCTACATTTATTAGTATTTGGGTCTGATTGCTGTTTTTGCAACTATCCTTTTCATTTACTTTCGGGATATCTTCGTTGCACTCTTTGGCGAGTCTGCTGCCAAGTGCCTTGCTACATAACTCAATCAGTTTCGGCGTTTTTGGTTGAGCTGGTTTTAACAATGCATAAATTTATGTGACAGAACTCGGTACTAGGAGTTGTTCTTGCTAGCCAGCACTTTGGAAATCCTCTTACGGCAGTGCCCTGTGCAGTTTCTAGTGTTTGCCACTCAATCTTTGGCAGCGTTCTTGCTGGGATTTGGAGGCAAAGCAAAGATTAGGTGAAAATGATGTATAAATTTTGTATGCATCATGTGTTTTATCCTTTTGGTTCAGTAGATTTTGTAACATTGGAATAGTTCTTAACAGGTTGTTTACAACCATTCCATGTTTGAACTTTGTTTAATTTTGTTTTAGAATAACTCTTAAATTATTTTTTTCCATTAAAAATAAATTTAAT AAACGTCGAAAATGGATTCCCGGTCCCATCGAACTAAACTCCACGCCACTCTCCACGGCTCCACTTAACCAAGCTGACCAAAGGGTTCTGGCGGGATTGAAGATCGCCGTCCCCGGAGTTCCCCCGTTGCCGTAAACACTGAACTGAGCTTCACAGTCACGTCATTGTCGAAGTTTCATTCATTCATTCTTTGTTTGGTCGTCGCCGAGACATAGAGAATGCAGTCTCTTCCATCAGATACTTGCGTTCTTCGTCCTTATCGATATTCCCTTTCAACCTTCACGCCGCGCACTTCACTTGTAACTTCATCTTCTTCTAACAACCCTCTCAATTCGTCTTTGTCCTCTTTTTCTCTGGTTGGGTTACGTCGTGAATCTTCTTTACTGCTATTCGGCGACCGAATTTGGAATCGGAACCTTTTGTTTGCTCCCAGACCAAACGGAATGATTTTGGATTGTTAGTTCCTCCTCTTCGATGCGAACCGTCATCGAACGGCAACAGCATCCAGGGCGAGCGGAGTTTGATGCAGTGGATTGAATTGATTGGAGAAGCTTTATCTACTGCGTTTCCTGTTTGGGTGGCGCTAGGTTGCGTTTTAGGGCTGCTCAGACCGGCTTCCTATGCTTGGGTTCAACCGAGATGGACTGTTCTTGGCATTACTCTCACAATGCTTGGTATGGCATGACATTGACCCTCGATGATCTTCGTGGAGCCTTGGCTATGCCTAAGGAATTGATTTCTGGGTTCGTTCTCCAGTATTCGGTGATGCCAATATCAGGCTTTCTTGTCAGCAAGCTTTTAAATTTGCCATCTTACTATGCAGCTGGTTTAATATTGGTTGGTTGCTGTCCTGGTGGAACAGCAAGCAATATCGTCACTTACATTGCAAGGGGAAATGTAGCTCTTTCCGTGTTGATGACTGCCACAAGCACTATGGCAGCCGTGATCATGACCCCTTTTCTCACTGCCAAACTGGCTGGTCAATTTGTTGCCGTAGATGCAGCTGGGTTGTTAATGTCCACCCTGCAGATTGTGCTTCTTCCAGTGTTGGGTGGGGCATTTTTAAACCAGTATTTCCATGGCTTGGTTAGATTTGTCTCTCCATTCATGCCCCCTATCGCAGTTGGCACCGTAGCTGTTTTATGTGGACATGCAATTGCTCAGAGCTCCTCTGCTATTCGGATCTCTGGTCAGCAAGTAGTACTGGCTGCAGCTCTTCTTCACGCTTCAGGATTTTTCTTCGGTTATGTGCTTGCAAGATTGCTTGGCATCGACATTGCATCTTCTCGAACGATCTCCATTGAAGTTGGAATGCAGAACTCGGTACTAGGAGTTGTTCTTGCTAGCCAGCACTTTGGAAATCCTCTTACGGCAGTGCCCTGTGCAGTTTCTAGTGTTTGCCACTCAATCTTTGGCAGCGTTCTTGCTGGGATTTGGAGGCAAAGCAAAGATTAGGTGAAAATGATGTATAAATTTTGTATGCATCATGTGTTTTATCCTTTTGGTTCAGTAGATTTTGTAACATTGGAATAGTTCTTAACAGGTTGTTTACAACCATTCCATGTTTGAACTTTGTTTAATTTTGTTTTAGAATAACTCTTAAATTATTTTTTTCCATTAAAAATAAATTTAAT ATGGACTGTTCTTGGCATTACTCTCACAATGCTTGGTATGGCATGACATTGACCCTCGATGATCTTCGTGGAGCCTTGGCTATGCCTAAGGAATTGATTTCTGGGTTCGTTCTCCAGTATTCGGTGATGCCAATATCAGGCTTTCTTGTCAGCAAGCTTTTAAATTTGCCATCTTACTATGCAGCTGGTTTAATATTGGTTGGTTGCTGTCCTGGTGGAACAGCAAGCAATATCGTCACTTACATTGCAAGGGGAAATGTAGCTCTTTCCGTGTTGATGACTGCCACAAGCACTATGGCAGCCGTGATCATGACCCCTTTTCTCACTGCCAAACTGGCTGGTCAATTTGTTGCCGTAGATGCAGCTGGGTTGTTAATGTCCACCCTGCAGATTGTGCTTCTTCCAGTGTTGGGTGGGGCATTTTTAAACCAGTATTTCCATGGCTTGGTTAGATTTGTCTCTCCATTCATGCCCCCTATCGCAGTTGGCACCGTAGCTGTTTTATGTGGACATGCAATTGCTCAGAGCTCCTCTGCTATTCGGATCTCTGGTCAGCAAGTAGTACTGGCTGCAGCTCTTCTTCACGCTTCAGGATTTTTCTTCGGTTATGTGCTTGCAAGATTGCTTGGCATCGACATTGCATCTTCTCGAACGATCTCCATTGAAGTTGGAATGCAGAACTCGGTACTAGGAGTTGTTCTTGCTAGCCAGCACTTTGGAAATCCTCTTACGGCAGTGCCCTGTGCAGTTTCTAGTGTTTGCCACTCAATCTTTGGCAGCGTTCTTGCTGGGATTTGGAGGCAAAGCAAAGATTAG MDCSWHYSHNAWYGMTLTLDDLRGALAMPKELISGFVLQYSVMPISGFLVSKLLNLPSYYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRFVSPFMPPIAVGTVAVLCGHAIAQSSSAIRISGQQVVLAAALLHASGFFFGYVLARLLGIDIASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD Homology
BLAST of IVF0013312 vs. ExPASy Swiss-Prot
Match: Q93YR2 (Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS1 PE=2 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 4.0e-113 Identity = 212/256 (82.81%), Postives = 236/256 (92.19%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy Swiss-Prot
Match: Q7XVB3 (Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS1 PE=2 SV=2) HSP 1 Score: 384.4 bits (986), Expect = 1.1e-105 Identity = 202/254 (79.53%), Postives = 226/254 (88.98%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy Swiss-Prot
Match: Q5VRB2 (Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS2 PE=2 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 2.1e-58 Identity = 124/254 (48.82%), Postives = 163/254 (64.17%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy Swiss-Prot
Match: Q1EBV7 (Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS2 PE=1 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 6.3e-58 Identity = 127/254 (50.00%), Postives = 164/254 (64.57%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy Swiss-Prot
Match: O34524 (Uncharacterized sodium-dependent transporter YocS OS=Bacillus subtilis (strain 168) OX=224308 GN=yocS PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.3e-43 Identity = 99/253 (39.13%), Postives = 155/253 (61.26%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy TrEMBL
Match: A0A5D3DX81 (Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00270 PE=3 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 3.6e-133 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy TrEMBL
Match: A0A1S3CK43 (LOW QUALITY PROTEIN: probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501847 PE=3 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 3.6e-133 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy TrEMBL
Match: A0A0A0KZF9 (Sodium-bile acid cotransporter OS=Cucumis sativus OX=3659 GN=Csa_4G622840 PE=3 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132 Identity = 256/258 (99.22%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy TrEMBL
Match: A0A5A7VHN1 (Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00330 PE=3 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.3e-126 Identity = 248/260 (95.38%), Postives = 252/260 (96.92%), Query Frame = 0
BLAST of IVF0013312 vs. ExPASy TrEMBL
Match: A0A6J1BV26 (probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005764 PE=3 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 1.4e-124 Identity = 240/257 (93.39%), Postives = 251/257 (97.67%), Query Frame = 0
BLAST of IVF0013312 vs. NCBI nr
Match: XP_008463794.1 (PREDICTED: LOW QUALITY PROTEIN: probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumis melo] >TYK27850.1 putative sodium/metabolite cotransporter BASS1 [Cucumis melo var. makuwa]) HSP 1 Score: 482 bits (1241), Expect = 1.58e-168 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of IVF0013312 vs. NCBI nr
Match: XP_004146013.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumis sativus] >KGN55025.1 hypothetical protein Csa_012383 [Cucumis sativus]) HSP 1 Score: 481 bits (1237), Expect = 6.87e-168 Identity = 256/258 (99.22%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of IVF0013312 vs. NCBI nr
Match: XP_038898003.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Benincasa hispida]) HSP 1 Score: 461 bits (1185), Expect = 5.94e-160 Identity = 244/258 (94.57%), Postives = 254/258 (98.45%), Query Frame = 0
BLAST of IVF0013312 vs. NCBI nr
Match: KAA0066700.1 (putative sodium/metabolite cotransporter BASS1 [Cucumis melo var. makuwa]) HSP 1 Score: 459 bits (1181), Expect = 2.25e-159 Identity = 248/260 (95.38%), Postives = 252/260 (96.92%), Query Frame = 0
BLAST of IVF0013312 vs. NCBI nr
Match: XP_022133119.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Momordica charantia]) HSP 1 Score: 453 bits (1166), Expect = 3.03e-157 Identity = 240/257 (93.39%), Postives = 251/257 (97.67%), Query Frame = 0
BLAST of IVF0013312 vs. TAIR 10
Match: AT1G78560.1 (Sodium Bile acid symporter family ) HSP 1 Score: 409.1 bits (1050), Expect = 2.8e-114 Identity = 212/256 (82.81%), Postives = 236/256 (92.19%), Query Frame = 0
BLAST of IVF0013312 vs. TAIR 10
Match: AT2G26900.1 (Sodium Bile acid symporter family ) HSP 1 Score: 225.7 bits (574), Expect = 4.4e-59 Identity = 127/254 (50.00%), Postives = 164/254 (64.57%), Query Frame = 0
BLAST of IVF0013312 vs. TAIR 10
Match: AT3G25410.1 (Sodium Bile acid symporter family ) HSP 1 Score: 139.8 bits (351), Expect = 3.2e-33 Identity = 92/256 (35.94%), Postives = 141/256 (55.08%), Query Frame = 0
BLAST of IVF0013312 vs. TAIR 10
Match: AT4G22840.1 (Sodium Bile acid symporter family ) HSP 1 Score: 139.8 bits (351), Expect = 3.2e-33 Identity = 93/267 (34.83%), Postives = 143/267 (53.56%), Query Frame = 0
BLAST of IVF0013312 vs. TAIR 10
Match: AT4G12030.2 (bile acid transporter 5 ) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32 Identity = 89/262 (33.97%), Postives = 143/262 (54.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|