IVF0013270 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGGTCGAATGTCCCTTTTGGGTACGAGGGATTTGCCGCTGGCAATGAAAATGATAAAGATCCTTACTATGTTTAGTCAAGGACTAAACATGTCGCCTGATGAATTTGTGGCCAGTCGACATGAGCGGTTAGGTGACGGTAGAAATGCTTCAAGTAGGTCAAAGAGGAAGAGGAGAAGTCAGCCTGTAGAGACCACGAACATAATTCAAAATGTCATGGAGTACGCCAATAGCCAGCTCAACTACATTGCAAATTGGCCGATCTTAAGGAATCAAAATGCAAGCGCAACACAGGAGGAGGTCGTTCGACAATTACAGGCCATCCTTAAACTTAGTAGAATTGAGGTGTTGCTGTATGCGTATCTTTATGCATAA ATGTGGGGTCGAATGTCCCTTTTGGGTACGAGGGATTTGCCGCTGGCAATGAAAATGATAAAGATCCTTACTATGTTTAGTCAAGGACTAAACATGTCGCCTGATGAATTTGTGGCCAGTCGACATGAGCGGTTAGGTGACGGTAGAAATGCTTCAAGTAGGTCAAAGAGGAAGAGGAGAAGTCAGCCTGTAGAGACCACGAACATAATTCAAAATGTCATGGAGTACGCCAATAGCCAGCTCAACTACATTGCAAATTGGCCGATCTTAAGGAATCAAAATGCAAGCGCAACACAGGAGGAGGTCGTTCGACAATTACAGGCCATCCTTAAACTTAGTAGAATTGAGGTGTTGCTGTATGCGTATCTTTATGCATAA ATGTGGGGTCGAATGTCCCTTTTGGGTACGAGGGATTTGCCGCTGGCAATGAAAATGATAAAGATCCTTACTATGTTTAGTCAAGGACTAAACATGTCGCCTGATGAATTTGTGGCCAGTCGACATGAGCGGTTAGGTGACGGTAGAAATGCTTCAAGTAGGTCAAAGAGGAAGAGGAGAAGTCAGCCTGTAGAGACCACGAACATAATTCAAAATGTCATGGAGTACGCCAATAGCCAGCTCAACTACATTGCAAATTGGCCGATCTTAAGGAATCAAAATGCAAGCGCAACACAGGAGGAGGTCGTTCGACAATTACAGGCCATCCTTAAACTTAGTAGAATTGAGGTGTTGCTGTATGCGTATCTTTATGCATAA MWGRMSLLGTRDLPLAMKMIKILTMFSQGLNMSPDEFVASRHERLGDGRNASSRSKRKRRSQPVETTNIIQNVMEYANSQLNYIANWPILRNQNASATQEEVVRQLQAILKLSRIEVLLYAYLYA Homology
BLAST of IVF0013270 vs. ExPASy TrEMBL
Match: A0A5A7TKY0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00690 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.6e-59 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of IVF0013270 vs. ExPASy TrEMBL
Match: E5GBS5 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 9.1e-23 Identity = 62/86 (72.09%), Postives = 71/86 (82.56%), Query Frame = 0
BLAST of IVF0013270 vs. ExPASy TrEMBL
Match: A0A5D3BVH6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00320 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of IVF0013270 vs. ExPASy TrEMBL
Match: A0A5A7V442 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005190 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of IVF0013270 vs. ExPASy TrEMBL
Match: A0A5D3BC43 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001510 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 2.0e-17 Identity = 46/93 (49.46%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of IVF0013270 vs. NCBI nr
Match: KAA0042367.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15486.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 233 bits (595), Expect = 4.84e-77 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of IVF0013270 vs. NCBI nr
Match: ADN33917.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 114 bits (286), Expect = 4.12e-29 Identity = 62/86 (72.09%), Postives = 71/86 (82.56%), Query Frame = 0
BLAST of IVF0013270 vs. NCBI nr
Match: TYK02236.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (276), Expect = 1.32e-27 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of IVF0013270 vs. NCBI nr
Match: KAA0060635.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (276), Expect = 3.65e-26 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of IVF0013270 vs. NCBI nr
Match: KAA0038998.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.3 bits (238), Expect = 3.34e-22 Identity = 54/73 (73.97%), Postives = 57/73 (78.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|