IVF0013258 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGAAATATAAATAATTATAATAGTTAGCTTTTAGCTCGTAAAGTTTCTTCGTTTTCAAAATGGGGTTTTTTGAAAGAGCCACCGTTCACTTTTGCATGCAGCAATCGGGTACGTACCCATTTTTTAATTTTGTTTCTTTCGTAATCCATCATTTTTTTAAAGATATTAATATAAAGCATTGTGTGTGTGTGTATAAGTTTTAATTGATCATTAGCTAATATATGTTTATTTTTTGTTCTACTTCACCTGCAGGTCTGCCATTGTGCTTCTCTATCCACTGTATAACTTTCTATCTCTTTTTCTCTCTCCAAAAGGGCCGGAGCTAAAAGAGTTTTTTCTTTTTCTTTCTTTTAATTAGAAAAGAGGATACTTTATCTTGATCGAGAATTTTAATTTGGCTCCGTCCCTACTTTTTATTACGATAACTATTATTGTTAAATTGCTGATCTCACATGGGAATAAGAAACAGGTATGAATCGAAATTGGCAATGGAGAAACCTTCATCTCGAGAACATCAACAATGGTTGACATACTGGGTTTTGCTTTCATTGCTCACCCTTTTCGAGCTTTATTTGTCCACCATTATTTCATGGTACGTAGCTTCAAATATACAATAATGTTATTTTTGGGTAAGCTTTATAAGTCGATAAAGTTTGGTTTCATTTTCTTTTCTTGAGTTTATATTATATTAGATAACGTATCCAATACCTATTAGATAATTAACATGGAGTTCATGATCTTAGAACCAATTGGCATTATGACATAGTGAAAAGAGAACGAGTACAAGAATTCATGCATGCGTCTTATAATAATTATGGGATCTCTTTTATCTCTTTTCAATGTTATATGTAGGTTTAGATTTTATATATATATATATATATATGTTTTGATATTATATTAGATGAACATAACTTTTTTCTCAAAACAAATTGATAACGAAAGATGGTATAAGGCCTCTCATCCTTTTACCTTTAGTTTTATTTATTTTAAAAGTTTCCATCACTGTATTCAAGGACTGATGTAATATAATTGAATATAAATTTTGTGGTGTAGGATTCCACTTTGGCCTTATATAAAGTTGGTGTTTTGCTTGTGGTTGGCGCTGCCAAGTTTCAAGGGTGCAGCTTATGTTTTTGAGAATATTGCAATGAAATACATCAAGGTTGAAGATATTGAAGAGAACCCCGAAAGAGATTTAGAGGAGGAAAAGAAAGAAAAAGAGGACATGAAGAAGAAAGCAAAAGAGGACATGAAGAAGAAAGACGATGAAGACGAAGCTGTTGATGAAGACGAAGATGATGAGGAGGACGAGGACGAGGATGAGGCCGTGAGCACACGCGATGAAAAGAAAGTCTTTCGTGCTTGGAAATTGGTGGATGATTACATTGAAAAAAATGGAGCTGATTCTTTAGAAAAGATTGTCAAAGCTGGTTTACAAGGTAACATGAAACATAAAACATTATAGTTCGTATATTTCATATATAATCTCTTTAGTTTCTTGATCTTTCTCTATTTTTGGACTTGGAAAAATGATTCCTGAACAAATTTTGCAGGCAACTGAGGCAACTTCACCAGCAGAAGACAATATGAGAGGAGGAATAATAAAAATAATTAGAGCATTTGCAATAATGTATATATGCAATATGATACACATACAAATAATTAATGTATGAAATATTTATTTTATACTCCACTTATTATACTTTGTCGAATTAGCTTAATATTCAATCCA GTTGAAATATAAATAATTATAATAGTTAGCTTTTAGCTCGTAAAGTTTCTTCGTTTTCAAAATGGGGTTTTTTGAAAGAGCCACCGTTCACTTTTGCATGCAGCAATCGGGTCTGCCATTGTGCTTCTCTATCCACTGTATGAATCGAAATTGGCAATGGAGAAACCTTCATCTCGAGAACATCAACAATGGTTGACATACTGGGTTTTGCTTTCATTGCTCACCCTTTTCGAGCTTTATTTGTCCACCATTATTTCATGGATTCCACTTTGGCCTTATATAAAGTTGGTGTTTTGCTTGTGGTTGGCGCTGCCAAGTTTCAAGGGTGCAGCTTATGTTTTTGAGAATATTGCAATGAAATACATCAAGGTTGAAGATATTGAAGAGAACCCCGAAAGAGATTTAGAGGAGGAAAAGAAAGAAAAAGAGGACATGAAGAAGAAAGCAAAAGAGGACATGAAGAAGAAAGACGATGAAGACGAAGCTGTTGATGAAGACGAAGATGATGAGGAGGACGAGGACGAGGATGAGGCCGTGAGCACACGCGATGAAAAGAAAGTCTTTCGTGCTTGGAAATTGGTGGATGATTACATTGAAAAAAATGGAGCTGATTCTTTAGAAAAGATTGTCAAAGCTGGTTTACAAGGCAACTGAGGCAACTTCACCAGCAGAAGACAATATGAGAGGAGGAATAATAAAAATAATTAGAGCATTTGCAATAATGTATATATGCAATATGATACACATACAAATAATTAATGTATGAAATATTTATTTTATACTCCACTTATTATACTTTGTCGAATTAGCTTAATATTCAATCCA ATGGAGAAACCTTCATCTCGAGAACATCAACAATGGTTGACATACTGGGTTTTGCTTTCATTGCTCACCCTTTTCGAGCTTTATTTGTCCACCATTATTTCATGGATTCCACTTTGGCCTTATATAAAGTTGGTGTTTTGCTTGTGGTTGGCGCTGCCAAGTTTCAAGGGTGCAGCTTATGTTTTTGAGAATATTGCAATGAAATACATCAAGGTTGAAGATATTGAAGAGAACCCCGAAAGAGATTTAGAGGAGGAAAAGAAAGAAAAAGAGGACATGAAGAAGAAAGCAAAAGAGGACATGAAGAAGAAAGACGATGAAGACGAAGCTGTTGATGAAGACGAAGATGATGAGGAGGACGAGGACGAGGATGAGGCCGTGAGCACACGCGATGAAAAGAAAGTCTTTCGTGCTTGGAAATTGGTGGATGATTACATTGAAAAAAATGGAGCTGATTCTTTAGAAAAGATTGTCAAAGCTGGTTTACAAGGCAACTGA MEKPSSREHQQWLTYWVLLSLLTLFELYLSTIISWIPLWPYIKLVFCLWLALPSFKGAAYVFENIAMKYIKVEDIEENPERDLEEEKKEKEDMKKKAKEDMKKKDDEDEAVDEDEDDEEDEDEDEAVSTRDEKKVFRAWKLVDDYIEKNGADSLEKIVKAGLQGN Homology
BLAST of IVF0013258 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16 Identity = 50/160 (31.25%), Postives = 81/160 (50.62%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-13 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy Swiss-Prot
Match: Q07764 (Protein HVA22 OS=Hordeum vulgare OX=4513 GN=HVA22 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.7e-13 Identity = 30/71 (42.25%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy Swiss-Prot
Match: Q9S760 (HVA22-like protein d OS=Arabidopsis thaliana OX=3702 GN=HVA22D PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-12 Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11 Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy TrEMBL
Match: A0A5A7V335 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00180 PE=3 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy TrEMBL
Match: A0A1S3BM74 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103491378 PE=3 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy TrEMBL
Match: A0A0A0KI03 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G423340 PE=3 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63 Identity = 141/165 (85.45%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy TrEMBL
Match: A0A6J1D1X5 (HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111016843 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38 Identity = 99/165 (60.00%), Postives = 126/165 (76.36%), Query Frame = 0
BLAST of IVF0013258 vs. ExPASy TrEMBL
Match: A0A6J1JNP5 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486344 PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 2.3e-37 Identity = 102/163 (62.58%), Postives = 124/163 (76.07%), Query Frame = 0
BLAST of IVF0013258 vs. NCBI nr
Match: KAA0061674.1 (HVA22-like protein f [Cucumis melo var. makuwa] >TYK21150.1 HVA22-like protein f [Cucumis melo var. makuwa]) HSP 1 Score: 299 bits (765), Expect = 1.73e-101 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of IVF0013258 vs. NCBI nr
Match: XP_008449515.1 (PREDICTED: HVA22-like protein f [Cucumis melo]) HSP 1 Score: 299 bits (765), Expect = 3.46e-101 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of IVF0013258 vs. NCBI nr
Match: XP_004140140.1 (HVA22-like protein f [Cucumis sativus] >KGN47992.1 hypothetical protein Csa_003845 [Cucumis sativus]) HSP 1 Score: 250 bits (638), Expect = 7.37e-82 Identity = 141/165 (85.45%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of IVF0013258 vs. NCBI nr
Match: XP_038888450.1 (HVA22-like protein f [Benincasa hispida]) HSP 1 Score: 227 bits (579), Expect = 5.93e-73 Identity = 135/168 (80.36%), Postives = 145/168 (86.31%), Query Frame = 0
BLAST of IVF0013258 vs. NCBI nr
Match: XP_022148075.1 (HVA22-like protein f [Momordica charantia]) HSP 1 Score: 171 bits (433), Expect = 7.90e-51 Identity = 99/165 (60.00%), Postives = 121/165 (73.33%), Query Frame = 0
BLAST of IVF0013258 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17 Identity = 50/160 (31.25%), Postives = 81/160 (50.62%), Query Frame = 0
BLAST of IVF0013258 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-14 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of IVF0013258 vs. TAIR 10
Match: AT4G24960.1 (HVA22 homologue D ) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13 Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of IVF0013258 vs. TAIR 10
Match: AT4G24960.2 (HVA22 homologue D ) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13 Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of IVF0013258 vs. TAIR 10
Match: AT4G24960.3 (HVA22 homologue D ) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13 Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|