IVF0013071 (gene) Melon (IVF77) v1

Overview


Name	IVF0013071
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GATA transcription factor 29-like
Location	chr05: 646125 .. 646856 (+)
RNA-Seq Expression	IVF0013071
Synteny	IVF0013071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACTTAGTTGTGAATGAAATGAATCAGATGACCGCGAACAATCAAGGGTTAGCCAGAAATAATGAGATGATGAGTGAACCAAATTACAACCCTCACCAAATTGTATGGTCAAAAGATCTAAAAACCTATGTTCTTAAGTCAAATAATTATGGGCAGCTTCATCCAAGTTCATACAGTACTACTACTCATCAAGCAAAGCCCATAGCCACCAGCACTCCAAATAACAGTACCCCAAATCTTCCTCTTCCAAAAAAAGGGCACAATAATGACCTATACACACTCCTCAACCCTGCTTCTAGAATATCAGATGATCATGAAGCCGAAGCTTCCTCCGGTGGTCGGCGGAAAGGGTCGCGACGACGTCGAGCTTCAGCCACCAATGATGTCGAGAGAAGGTGTACCAATTACAATTGCAACACCAACTTCACACCCATGTGGCGTAAAGGTCCTCTTGGTCCTAAGGTACATACATATTTGATTAGAATCACAATGTTTAAATCGACTCTACTTGTATATTTACTTAAAATTACTCTCTGATTTTAACTGATGGACAGTTTCTAAAGTGATTTTAAAAATGAAAAAGCTACTACAAGTATAATACTAACTTGTAGACTATATTAATGAGTGTAATGAATATTTCAGAGCCTTTGCAATGCATGCGGAATAAGGTATAGAAAAGAAACGATGAATAAAGAAGCAATGGCAGCAGAAAACAGCAACGGCTAG

mRNA sequence

ATGGATGACTTAGTTGTGAATGAAATGAATCAGATGACCGCGAACAATCAAGGGTTAGCCAGAAATAATGAGATGATGAGTGAACCAAATTACAACCCTCACCAAATTGTATGGTCAAAAGATCTAAAAACCTATGTTCTTAAGTCAAATAATTATGGGCAGCTTCATCCAAGTTCATACAGTACTACTACTCATCAAGCAAAGCCCATAGCCACCAGCACTCCAAATAACAGTACCCCAAATCTTCCTCTTCCAAAAAAAGGGCACAATAATGACCTATACACACTCCTCAACCCTGCTTCTAGAATATCAGATGATCATGAAGCCGAAGCTTCCTCCGGTGGTCGGCGGAAAGGGTCGCGACGACGTCGAGCTTCAGCCACCAATGATGTCGAGAGAAGGTGTACCAATTACAATTGCAACACCAACTTCACACCCATGTGGCGTAAAGGTCCTCTTGGTCCTAAGAGCCTTTGCAATGCATGCGGAATAAGGTATAGAAAAGAAACGATGAATAAAGAAGCAATGGCAGCAGAAAACAGCAACGGCTAG

Coding sequence (CDS)

ATGGATGACTTAGTTGTGAATGAAATGAATCAGATGACCGCGAACAATCAAGGGTTAGCCAGAAATAATGAGATGATGAGTGAACCAAATTACAACCCTCACCAAATTGTATGGTCAAAAGATCTAAAAACCTATGTTCTTAAGTCAAATAATTATGGGCAGCTTCATCCAAGTTCATACAGTACTACTACTCATCAAGCAAAGCCCATAGCCACCAGCACTCCAAATAACAGTACCCCAAATCTTCCTCTTCCAAAAAAAGGGCACAATAATGACCTATACACACTCCTCAACCCTGCTTCTAGAATATCAGATGATCATGAAGCCGAAGCTTCCTCCGGTGGTCGGCGGAAAGGGTCGCGACGACGTCGAGCTTCAGCCACCAATGATGTCGAGAGAAGGTGTACCAATTACAATTGCAACACCAACTTCACACCCATGTGGCGTAAAGGTCCTCTTGGTCCTAAGAGCCTTTGCAATGCATGCGGAATAAGGTATAGAAAAGAAACGATGAATAAAGAAGCAATGGCAGCAGAAAACAGCAACGGCTAG

Protein sequence

MDDLVVNEMNQMTANNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQAKPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG

Homology

[Close]

BLAST of IVF0013071 vs. ExPASy Swiss-Prot
Match: Q9LT45 (GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.6e-11
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 83  PLPKKGHNNDLYTLLN-PASRISDDHEAEASSGGRRKGSRRRRASATN------DVERRC 142
           P P+    +D Y L++ PA R   ++    ++  +   + +R            +  ++C
Sbjct: 100 PAPETPPVSDEYVLIDVPARRARRNNSTVMTNSWKENATPKRIRGCGGFCGGRIEGMKKC 159

Query: 143 TNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNK 174
           TN NCN   TPMWR+GPLGPKSLCNACGI++RKE   K
Sbjct: 160 TNMNCNALNTPMWRRGPLGPKSLCNACGIKFRKEEERK 197

[Close]

BLAST of IVF0013071 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 95  TLLNPASRISDDHEAEASS-----------GGRRKGSRRRRASATNDVERRCTNYNCNTN 154
           +L  P++R+ D H   +++           GG  K S  ++    + + RRC   +C+T 
Sbjct: 43  SLGTPSTRLDDHHRFSSANSNNISGDFYIHGGNAKTSSYKKGGVAHSLPRRCA--SCDTT 102

Query: 155 FTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 184
            TP+WR GP GPKSLCNACGIR++KE     A     S G
Sbjct: 103 STPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGG 140

[Close]

BLAST of IVF0013071 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.6e-09
Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 63  TTHQAKPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEA----SSGGRRK 122
           ++ +A+P+A + P     N   P   H   L      A+ +S D  AE+      G    
Sbjct: 84  SSRRAEPVAAAAP---AANHGAPVPAHYPSL-----SAATVSWDATAESYYCGQQGRPAT 143

Query: 123 GSRRRRASATND--VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 170
           G+ +  A A +D  ++RRC   NC T  TP+WR GP GPKSLCNACGIRY+KE
Sbjct: 144 GAAKCAAGAGHDALLDRRCA--NCGTASTPLWRNGPRGPKSLCNACGIRYKKE 186

[Close]

BLAST of IVF0013071 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.6e-09
Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 63  TTHQAKPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEA----SSGGRRK 122
           ++ +A+P+A + P     N   P   H   L      A+ +S D  AE+      G    
Sbjct: 84  SSRRAEPVAAAAP---AANHGAPVPAHYPSL-----SAATVSWDATAESYYCGQQGRPAT 143

Query: 123 GSRRRRASATND--VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 170
           G+ +  A A +D  ++RRC   NC T  TP+WR GP GPKSLCNACGIRY+KE
Sbjct: 144 GAAKCAAGAGHDALLDRRCA--NCGTASTPLWRNGPRGPKSLCNACGIRYKKE 186

[Close]

BLAST of IVF0013071 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.7e-09
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 90  NNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASATNDVERRCTNYNCNTNFTPMWR 149
           + D  T L+ A  +SD      SS G   G      S++ D +R C   +C T  TP+WR
Sbjct: 5   SEDTKTKLDSAGELSDVDNENCSSSGSGGG------SSSGDTKRTCV--DCGTIRTPLWR 64

Query: 150 KGPLGPKSLCNACGIRYRKETMNKEAMAAE 180
            GP GPKSLCNACGI+ RK+      M +E
Sbjct: 65  GGPAGPKSLCNACGIKSRKKRQAALGMRSE 86

[Close]

BLAST of IVF0013071 vs. ExPASy TrEMBL
Match: A0A5A7TDI3 (GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00190 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.5e-94
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 8   EMNQMTANNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA 67
           + +QMTANNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA
Sbjct: 64  QTHQMTANNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA 123

Query: 68  KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASA 127
           KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASA
Sbjct: 124 KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASA 183

Query: 128 TNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 184
           TNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
Sbjct: 184 TNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 239

[Close]

BLAST of IVF0013071 vs. ExPASy TrEMBL
Match: A0A0A0L0J0 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.2e-81
Identity = 161/178 (90.45%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 9   MNQMTANNQGLARNNEMMSEPNY-NPHQIVWSKDLKTYVLKS-NNYG-QLHPSSYSTTTH 68
           MNQ+ ANNQGL RNNEMMSEPNY NPHQIVWSKDLKTYVLKS NN+G QLHPSSY   TH
Sbjct: 1   MNQVMANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSY-PNTH 60

Query: 69  QAKPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRA 128
           QAKPI TSTPNN TPNLPLPK+GHNNDLYTLLNPASR++DDHEAEASS GRRKGSRRRR 
Sbjct: 61  QAKPIPTSTPNN-TPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRRKGSRRRRV 120

Query: 129 SATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 184
           SATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
Sbjct: 121 SATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 176

[Close]

BLAST of IVF0013071 vs. ExPASy TrEMBL
Match: A0A6J1JEF0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111483776 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.7e-62
Identity = 130/176 (73.86%), Postives = 145/176 (82.39%), Query Frame = 0


Query: 12  MTANNQGLA----RNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA 71
           M  NN GLA    RN EMMSE NYNPHQIVWSK+LKTYVLKSNN+GQLHPS Y   T+ A
Sbjct: 94  MVNNNHGLASSGGRNGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLY-CNTYPA 153

Query: 72  KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASA 131
           K + ++   NST NLPL  + +NND YTLLNPA R +DDHEAEASSG RR+G +RRR SA
Sbjct: 154 KTVGSTA--NSTANLPL--QNYNNDQYTLLNPACRKADDHEAEASSGSRRRGLQRRRVSA 213

Query: 132 TNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 184
            N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEA+AAEN++G
Sbjct: 214 CNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAVAAENNHG 264

[Close]

BLAST of IVF0013071 vs. ExPASy TrEMBL
Match: A0A6J1FTP0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111448354 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.5e-61
Identity = 131/177 (74.01%), Postives = 145/177 (81.92%), Query Frame = 0


Query: 12  MTANNQGLA----RNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA 71
           M  NN GLA    R+ EMMSE NYNPHQIVWSK+LKTYVLKSNN+GQLHPS Y   T+ A
Sbjct: 94  MVNNNHGLASSGGRSGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLY-CNTYPA 153

Query: 72  KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASS-GGRRKGSRRRRAS 131
           K I ++   N  PNLPL  + +NND YTLLNPA R +DDHEAEASS GGRR+G +RRR S
Sbjct: 154 KTIGSTA--NGMPNLPL--QNYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVS 213

Query: 132 ATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 184
           A N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEAMAAEN++G
Sbjct: 214 ACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENNHG 265

[Close]

BLAST of IVF0013071 vs. ExPASy TrEMBL
Match: A0A6J1DIM0 (GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.6e-44
Identity = 107/168 (63.69%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 15  NNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQAKPIATST 74
           NN GL  +   MSE NYNP+QI+WSK+LKTYVLKSNN   L   S+         I   +
Sbjct: 61  NNVGL-ESCGGMSEANYNPNQILWSKELKTYVLKSNNQTSL--GSHDQVKGNI-GIGNGS 120

Query: 75  PNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASATNDVERR 134
             N+  N+PL  + ++NDLYTLLNPASR +DDHE E SSG RRK SR RR S  ++ E+R
Sbjct: 121 TTNNLANVPL--QTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVS-HDEPEKR 180

Query: 135 CTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSN 183
           CTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MN+EAM AENS+
Sbjct: 181 CTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKELMNREAMTAENSH 221

[Close]

BLAST of IVF0013071 vs. NCBI nr
Match: KAA0041360.1 (GATA transcription factor 29-like [Cucumis melo var. makuwa] >TYK21656.1 GATA transcription factor 29-like [Cucumis melo var. makuwa])

HSP 1 Score: 355 bits (912), Expect = 1.24e-122
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 8   EMNQMTANNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA 67
           + +QMTANNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA
Sbjct: 64  QTHQMTANNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA 123

Query: 68  KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASA 127
           KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASA
Sbjct: 124 KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASA 183

Query: 128 TNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 183
           TNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG
Sbjct: 184 TNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 239

[Close]

BLAST of IVF0013071 vs. NCBI nr
Match: XP_038902274.1 (putative GATA transcription factor 22 [Benincasa hispida])

HSP 1 Score: 284 bits (727), Expect = 2.03e-94
Identity = 147/180 (81.67%), Postives = 160/180 (88.89%), Query Frame = 0


Query: 8   EMNQMTANNQGLA----RNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTT 67
           + +Q+  +N G A    RN EMMSE NYNPHQIVWSK+LKTYVLKSN++GQLHPSSYS T
Sbjct: 68  QTHQVMVDNHGSASSGGRNGEMMSEANYNPHQIVWSKELKTYVLKSNDFGQLHPSSYSNT 127

Query: 68  THQAKPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRR 127
            HQAKPIAT TPNNS PNLPLPK  +NNDLYTLLNPASRI+DDHEAEASSGGRR+GSRRR
Sbjct: 128 -HQAKPIAT-TPNNS-PNLPLPK--YNNDLYTLLNPASRITDDHEAEASSGGRRRGSRRR 187

Query: 128 RASATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 183
           R SA ND ERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKET+N+EAMAAENS+G
Sbjct: 188 RVSANNDAERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSSG 242

[Close]

BLAST of IVF0013071 vs. NCBI nr
Match: KAE8649488.1 (hypothetical protein Csa_017883, partial [Cucumis sativus])

HSP 1 Score: 253 bits (645), Expect = 2.39e-83
Identity = 131/146 (89.73%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 14  ANNQGLARNNEMMSEPNYN-PHQIVWSKDLKTYVLKSNN-YGQ-LHPSSYSTTTHQAKPI 73
           ANNQGL RNNEMMSEPNYN PHQIVWSKDLKTYVLKSNN +GQ LHPSSY  T HQAKPI
Sbjct: 3   ANNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNT-HQAKPI 62

Query: 74  ATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASATND 133
            TSTPNN TPNLPLPK+GHNNDLYTLLNPASR++DDHEAEASS GRRKGSRRRR SATND
Sbjct: 63  PTSTPNN-TPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRRKGSRRRRVSATND 122

Query: 134 VERRCTNYNCNTNFTPMWRKGPLGPK 156
           VERRCTNYNCNTNFTPMWRKGPLGPK
Sbjct: 123 VERRCTNYNCNTNFTPMWRKGPLGPK 146

[Close]

BLAST of IVF0013071 vs. NCBI nr
Match: KAG7010246.1 (GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251 bits (641), Expect = 4.79e-81
Identity = 133/177 (75.14%), Postives = 146/177 (82.49%), Query Frame = 0


Query: 12  MTANNQGLA----RNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA 71
           M  NN GLA    RN EMMSE NYNPHQIVWSK+LKTYVLKSNN+GQLHPS Y  T + A
Sbjct: 92  MVNNNHGLASSGSRNGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNT-YPA 151

Query: 72  KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGG-RRKGSRRRRAS 131
           K I ++   NS PNLPL  + +NND YTLLNPA R +DDHEAEASSGG RR+G +RRR S
Sbjct: 152 KTIGSTA--NSMPNLPL--QNYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVS 211

Query: 132 ATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 183
           A N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEAMAAEN++G
Sbjct: 212 ACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENNHG 263

[Close]

BLAST of IVF0013071 vs. NCBI nr
Match: XP_022985849.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita maxima])

HSP 1 Score: 251 bits (640), Expect = 7.02e-81
Identity = 130/176 (73.86%), Postives = 145/176 (82.39%), Query Frame = 0


Query: 12  MTANNQGLA----RNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQA 71
           M  NN GLA    RN EMMSE NYNPHQIVWSK+LKTYVLKSNN+GQLHPS Y  T + A
Sbjct: 94  MVNNNHGLASSGGRNGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNT-YPA 153

Query: 72  KPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASA 131
           K + ++   NST NLPL  + +NND YTLLNPA R +DDHEAEASSG RR+G +RRR SA
Sbjct: 154 KTVGSTA--NSTANLPL--QNYNNDQYTLLNPACRKADDHEAEASSGSRRRGLQRRRVSA 213

Query: 132 TNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 183
            N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEA+AAEN++G
Sbjct: 214 CNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAVAAENNHG 264

[Close]

BLAST of IVF0013071 vs. TAIR 10
Match: AT3G20750.1 (GATA transcription factor 29 )

HSP 1 Score: 68.6 bits (166), Expect = 6.1e-12
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 83  PLPKKGHNNDLYTLLN-PASRISDDHEAEASSGGRRKGSRRRRASATN------DVERRC 142
           P P+    +D Y L++ PA R   ++    ++  +   + +R            +  ++C
Sbjct: 100 PAPETPPVSDEYVLIDVPARRARRNNSTVMTNSWKENATPKRIRGCGGFCGGRIEGMKKC 159

Query: 143 TNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNK 174
           TN NCN   TPMWR+GPLGPKSLCNACGI++RKE   K
Sbjct: 160 TNMNCNALNTPMWRRGPLGPKSLCNACGIKFRKEEERK 197

[Close]

BLAST of IVF0013071 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 95  TLLNPASRISDDHEAEASS-----------GGRRKGSRRRRASATNDVERRCTNYNCNTN 154
           +L  P++R+ D H   +++           GG  K S  ++    + + RRC   +C+T 
Sbjct: 43  SLGTPSTRLDDHHRFSSANSNNISGDFYIHGGNAKTSSYKKGGVAHSLPRRCA--SCDTT 102

Query: 155 FTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 184
            TP+WR GP GPKSLCNACGIR++KE     A     S G
Sbjct: 103 STPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGG 140

[Close]

BLAST of IVF0013071 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-10
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 90  NNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASATNDVERRCTNYNCNTNFTPMWR 149
           + D  T L+ A  +SD      SS G   G      S++ D +R C   +C T  TP+WR
Sbjct: 5   SEDTKTKLDSAGELSDVDNENCSSSGSGGG------SSSGDTKRTCV--DCGTIRTPLWR 64

Query: 150 KGPLGPKSLCNACGIRYRKETMNKEAMAAE 180
            GP GPKSLCNACGI+ RK+      M +E
Sbjct: 65  GGPAGPKSLCNACGIKSRKKRQAALGMRSE 86

[Close]

BLAST of IVF0013071 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 95  TLLNPASRI-SDDHEAEASS-----------GGRRKGSRRRRASATNDVERRCTNYNCNT 154
           +L  P++R+ ++D E   SS            G +KG         N + RRC   NC+T
Sbjct: 28  SLGTPSTRLCNEDDERRFSSHTSDTIGWDFLNGSKKGG---GGGGHNLLARRCA--NCDT 87

Query: 155 NFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENS 182
             TP+WR GP GPKSLCNACGIR++KE   + A  A NS
Sbjct: 88  TSTPLWRNGPRGPKSLCNACGIRFKKE--ERRASTARNS 119

[Close]

BLAST of IVF0013071 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.7e-09
Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 89  HNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASATNDVERRCTNYNCNTNFTPMW 148
           +NN      N     S +  +   SGG   G         + + RRC   NC+T  TP+W
Sbjct: 110 NNNSKTAPYNNVPSFSANKPSRGCSGG--GGGGGGGGGGDSLLARRCA--NCDTTSTPLW 169

Query: 149 RKGPLGPKSLCNACGIRYRKE 170
           R GP GPKSLCNACGIR++KE
Sbjct: 170 RNGPRGPKSLCNACGIRFKKE 186

The following BLAST results are available for this feature:

BLAST of IVF0013071 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT45	8.6e-11	38.78	GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1	[more]
Q9ZPX0	2.5e-10	37.00	GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2	[more]
B8AX51	3.6e-09	39.82	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]
Q6L5E5	3.6e-09	39.82	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]
Q9LIB5	4.7e-09	41.11	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]

BLAST of IVF0013071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDI3	6.5e-94	98.30	GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0L0J0	2.2e-81	90.45	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 P...	[more]
A0A6J1JEF0	1.7e-62	73.86	GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1FTP0	1.5e-61	74.01	GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1DIM0	3.6e-44	63.69	GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4...	[more]

BLAST of IVF0013071 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041360.1	1.24e-122	98.30	GATA transcription factor 29-like [Cucumis melo var. makuwa] >TYK21656.1 GATA tr...	[more]
XP_038902274.1	2.03e-94	81.67	putative GATA transcription factor 22 [Benincasa hispida]	[more]
KAE8649488.1	2.39e-83	89.73	hypothetical protein Csa_017883, partial [Cucumis sativus]	[more]
KAG7010246.1	4.79e-81	75.14	GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022985849.1	7.02e-81	73.86	GATA zinc finger domain-containing protein 8-like [Cucurbita maxima]	[more]

BLAST of IVF0013071 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20750.1	6.1e-12	38.78	GATA transcription factor 29	[more]
AT2G18380.1	1.8e-11	37.00	GATA transcription factor 20	[more]
AT3G16870.1	3.4e-10	41.11	GATA transcription factor 17	[more]
AT4G36620.1	7.5e-10	41.41	GATA transcription factor 19	[more]
AT3G50870.1	3.7e-09	41.98	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 129..181 e-value: 2.0E-11 score: 54.0
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 135..169 e-value: 1.1E-15 score: 56.9
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 139..183 score: 11.252875
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 139..168 e-value: 1.65906E-11 score: 55.0714
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 129..182 e-value: 1.2E-13 score: 52.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..129
None	No IPR available	PANTHER	PTHR45658:SF36	GATA TRANSCRIPTION FACTOR 17-RELATED	coord: 74..177
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 74..177
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 127..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013071.2	IVF0013071.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding