IVF0013065 (gene) Melon (IVF77) v1

Overview


Name	IVF0013065
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LOB domain-containing protein
Location	chr09: 4053169 .. 4057126 (-)
RNA-Seq Expression	IVF0013065
Synteny	IVF0013065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTGCCTTGGGTTTTTTGAGGCCCCCCTTTCCTTTCTTCTTCTTCTTCCTTCTTCCTTTTTTCTTCTTAGGGTTTCTTCCCATATCTTATTTACCCTATGCTAAAATTATAAGGTAATTTATATATATATATATATATATATTATATTTATGCATGTTTATGTCCTTTCTCCCCCTAATTAAGAGCTTCTTCAAACACCAAATTTCTGGAGAAAGAAGGATCAAAAAGCTAGGTAAACCCTAATTCTAACCTTTTCATATACTTAATTAATTTTATGATATATGTATATATTATATATTATGCTCAACAAGAACTTTGGAAAGATCTCCTTGATGATTTTATTTTTCTCCCCTTTTGAGATTTTTTCCTTGGAGTCACTTAATTAAATTATAATAATTACTTCATTGAATTATTTTGATAATGTGTTGTCCTGCCTGTTTACCTAAAAAAAACTATCAAATTATAATTAATATGAAACACAGATCCTGCAAAATATGTGTTTATTAAATACTAAGATTTATATTGTTTTATATATATAAACTAAGAATTCATAATGTTTTAGTACAAAGGAAGGTGTGGGATTTTTAATGTTTCAGCTGAAACAGTAATGTGTGGTATGTTTTGTACAGTGAAGAGAATTGAATTTTAGACAATTTAAATTCCTTAAGAAAAAGAAAGAAAAGAAAAAAAAAAAAAAAAGGAAAAGAAAAGAAAAGAAAGAAAAGAGTAGGCTGTCTAAGAACAATTTAAAGTGTATTATTTATGTACTTTCTCCATCACTAAATTTATTTGTGATGTAATATTTAATAAACTATATGTACTACTAAATGTAGCACAATTGGAATAGGCCTGTCTATTTACTATTATAAATATTTAACCGTTTTTAGTATATAGCAAAATAAAATGAAATCATTTGCATTTTTATATAGGTTTGACAATTTCTTTCGATTTGTTAACTTCTCTTTAATAACATAAAATTTCATCTCGAAATTAATTGCAAATGAAAAGATTATCTCATGCATTTTATAAAAATAAAATTATGATATTGTAGTTTTTCATCTCTAATTGTTATATGTAAATGTGTAACATGATGGAGATAAATGAGGCAAAACCATCCTAAAAAACAGAGAAGAAAATCAATAAGGGAAATCCACTTATTCAAGTTAAAAAGCACTTTTTTTTCTATCTTTTTCTTTTTAGTGTACTTTCACCTACAATAAAATGAAATAAAATATTTAAATATAATAAAATAAAATATTTAAATATGACAAAGTTTCATACTCTATCAATAATAAATACATTTAGACTTAATAGACTTAATTCTAGAAGTGTTTATTGATGACATTATATGATAGAAATGGAGAAAAGCCTATCAAAGTTTATCATGGATAGAATAGAATATATAATTTTACTATATTTTATAAGTATTCTTGTCATTCATAATAATTTCATTTTTCTATATGTATATATACATATTGATAGACATATTTCTAGATAGCAAAAAAAATTTATTGAAACTATTTACAAAATCTAATAAAAAAAACTGAAATGCATTAGAGAAGATTTGATAGATTTTGCTGTACTTTGTAAATAATTTTAATTTTTTGCTATATTATTTGGAGATCTCTTTTATATATATATATATAATTTAATTAATTAAATAAAATACCACTCCAAACCAATTAAATATAGCTCATAATTAATATAGTGTATATTATAGAGCAATTATAAGAAATAGAACATTTAACAAAATATTTATTAATTTGTTAAAATTCTCTTATTTAAAAGAAACCTATATTTTATTTGCGATTGAGTGGGTTGTAATTTGAATTTTGTATCCTATTATTTTTAAAGAAAATTATAAGATTGACACCAAATCGCGTTAAAAACCTAATTTAATTCTTTGAAAAACAATGTTTATTTGATTTTTAAACCTATTTAACAATGAGATTTTGGGTTATTTATTTATTTGGAAAAGAAAACATATTTAATGCAAAAGTTAACCATTTGTGTACTTTAGTAATTTTATAAAAGATTTGGTTTAGAAAAGTGGAGAAGGGGATGAATAAATCCTTCCTTATTTGCATACATTTCTACCCAAAATATTATTAATATGCAACAAAAGATAAAGCTTTTTAGATTTATGTTAGCTACTTTAGGTACAAAAGTTATTCCATCATTAAAAAAATATATTATAATTTACTATTGAAAGCCCTAATCCAATAACAAAAAAAATCATAAACTATACTAATAACTACAAATAATTAAAAATAACAAAAAACCCTCCCCGTTAATCTAAAGGGGTATTTTAAAAAATATAATAAAATGATAATATATTTACGTTGTATAAAACAATTCCAAAAATAGAAAAAGTCAGCAGGAAAAATACAAAAAATGTCCCGTCAACGACGCGTGTAATATACACGATCGTTAAATGATTTATTTTTAAAATTGTCTATACACGATCGTTTAATTGGTTACACAATGGTTTAGATTTGATTGTTTAGCGATTTATTTTTTAAATTCATCACGTTTAATTAGGTTAGACGATGATTTAGATTTAGTTACATAATCGTTTAGATTTAATCGATCATTTGGATTTAGGTAGCCAAATTTAAATGATTTATTTTTTAAATTATAGGTATATATACGATCATTTAGATTTAGTTATTTAGAATTGAACCCAAACCGTAGACCCAGATAAATTTAAATAATTTTTTTTCAAGATTTGGTACACACTAAACGATGTTTTGTAGTTTAGATTTAACTTTTTTTTTTTTGTATAGGATCGTTTAGATTTGGAAAGATTTTTTTGTACACGATCGTTTAGATTTTGGTAATCAAATCTAAACGACGTTTTTTTTTCCAGCTTTTATATCTAGTACACGATCTTGAACAACCAAATAAAAATTTGAAAAAAATATATCTTTTATATTTTATTTGATATACGATCTTAACAAAAAAAAGACAATAGAGACGAAGATGGGAAGAAAAGGAGAAAAAAGAAAGATGATAGAACATACGAATATGAGAAAAAAGACAGAAGAACAAACTTAGAATATTTAAAAATGATTAATTTGATAGATTTTGTTACAAAAAATATTTTATTTAGTTAAATGCATTAAATGGTATATATTATTTTATAAGCAGCGATTGCATCTAATCTAATCTCATGTTTTCTATTAAAAAAAAAAGCATTAAAAAAATAATGAAAAAAAATCACTTTTTAACATAAAAAGTTTTTTACCGCTACATAACTGTTTTTTACTAGATAGCAAAAAGATAGAGGAAACTCAGACATGTAAACTTAAATTTCTTTTCTTATTTCATTTCGTGGATGTACATATTTTTAAGTAATTAATTCTATTACAAGAACAAAAGAATAAGACGATACCCGTGGATATTCTCCCCTATAATATATTGTTTGGTTTTGTTGATAGAGAAGAAAGAAAAACAGTATGGCTTCTTCAAGCTATACAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCTGATTGCATATTTGCACCCTATTTTCCCCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAGGTTCAACCCCATCAGCGCGAGGATGCCGTAAATTCTCTAGCTTATGAGGCCGAGGCTCGTATGAAAGACCCTGTCTACGGCTGCGTTGGGGCCATCTCCGTTTTGCAACGACAAGTTATTCGTCTCCAAAAAGAGCTTGACGCTACGAATGCTGATTTGGTACGATATGCAAGCGGTAGCGCCCGCCCGCCCTCACAATATGGAAGGAGAGCAACAACTGCCTCGGTGAGTAGTACTCGCCATCATTCTGGTCTGTCTTTTCTTTCTCCCTTGAGCAGTAATCATCACGATGATCCTTATTGCCATGAAAAAGAGGAAGGCAATTGA

mRNA sequence

CTTTTGCCTTGGGTTTTTTGAGGCCCCCCTTTCCTTTCTTCTTCTTCTTCCTTCTTCCTTTTTTCTTCTTAGGGTTTCTTCCCATATCTTATTTACCCTATGCTAAAATTATAAGGTAATTTATATATATATATATATATATATTATATTTATGCATGTTTATGTCCTTTCTCCCCCTAATTAAGAGCTTCTTCAAACACCAAATTTCTGGAGAAAGAAGGATCAAAAAGCTAGAGAAGAAAGAAAAACAGTATGGCTTCTTCAAGCTATACAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCTGATTGCATATTTGCACCCTATTTTCCCCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAGGTTCAACCCCATCAGCGCGAGGATGCCGTAAATTCTCTAGCTTATGAGGCCGAGGCTCGTATGAAAGACCCTGTCTACGGCTGCGTTGGGGCCATCTCCGTTTTGCAACGACAAGTTATTCGTCTCCAAAAAGAGCTTGACGCTACGAATGCTGATTTGGTACGATATGCAAGCGGTAGCGCCCGCCCGCCCTCACAATATGGAAGGAGAGCAACAACTGCCTCGGTGAGTAGTACTCGCCATCATTCTGGTCTGTCTTTTCTTTCTCCCTTGAGCAGTAATCATCACGATGATCCTTATTGCCATGAAAAAGAGGAAGGCAATTGA

Coding sequence (CDS)

ATGGCTTCTTCAAGCTATACAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCTGATTGCATATTTGCACCCTATTTTCCCCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAGGTTCAACCCCATCAGCGCGAGGATGCCGTAAATTCTCTAGCTTATGAGGCCGAGGCTCGTATGAAAGACCCTGTCTACGGCTGCGTTGGGGCCATCTCCGTTTTGCAACGACAAGTTATTCGTCTCCAAAAAGAGCTTGACGCTACGAATGCTGATTTGGTACGATATGCAAGCGGTAGCGCCCGCCCGCCCTCACAATATGGAAGGAGAGCAACAACTGCCTCGGTGAGTAGTACTCGCCATCATTCTGGTCTGTCTTTTCTTTCTCCCTTGAGCAGTAATCATCACGATGATCCTTATTGCCATGAAAAAGAGGAAGGCAATTGA

Protein sequence

MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN

Homology

[Close]

BLAST of IVF0013065 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-53
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 4   SSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQR 63
           S+YTNSPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASG-SARPPS 123
           EDAVNSLAYEAEAR+KDPVYGCVGAISVLQRQV+RLQ+EL+ TNADL+RYA        S
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTS 152

Query: 124 QYGRR 128
            YG R
Sbjct: 153 AYGGR 157

[Close]

BLAST of IVF0013065 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-49
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of IVF0013065 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.9e-42
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSS TNSPCAACKFLRRKC  +C+FAPYFPP++P KFANVHK+FGASNV+KLLNE+ P
Sbjct: 1   MASSS-TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYAS 116
            QREDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    ++L +Y S
Sbjct: 61  SQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQS 114

[Close]

BLAST of IVF0013065 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-39
Identity = 73/116 (62.93%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 7   TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           T SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDA 89

Query: 67  VNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPS 123
           VNSLAYEA+ R++DPVYGCVG IS+LQ  + +LQ++L     +L +Y + +A   S
Sbjct: 90  VNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145

[Close]

BLAST of IVF0013065 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-38
Identity = 77/135 (57.04%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 7   TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           T SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGR 126
           VNSLAYEA+ R++DPVYGCV  IS+LQR + +LQ++L     +L +Y   +A        
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAA-------- 154

Query: 127 RATTASVSSTRHHSG 142
            A  A+ +ST  ++G
Sbjct: 155 -AAAAASASTGTNNG 160

[Close]

BLAST of IVF0013065 vs. ExPASy TrEMBL
Match: A0A5A7T800 (LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00190 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.1e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 166
           PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN
Sbjct: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165

[Close]

BLAST of IVF0013065 vs. ExPASy TrEMBL
Match: A0A1S3C8P8 (LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.2e-88
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 166
           PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHE EEGN
Sbjct: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHENEEGN 165

[Close]

BLAST of IVF0013065 vs. ExPASy TrEMBL
Match: A0A0A0KSE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.2e-84
Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 166
           PSQYGRRATTASV STRHHSGLSFLSPLSS+HHD  YCH+KEEGN
Sbjct: 121 PSQYGRRATTASV-STRHHSGLSFLSPLSSSHHDSTYCHDKEEGN 164

[Close]

BLAST of IVF0013065 vs. ExPASy TrEMBL
Match: A0A6J1JRR4 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111487747 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.5e-68
Identity = 135/164 (82.32%), Postives = 143/164 (87.20%), Query Frame = 0


Query: 2   ASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 61
           +SSSY+NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PH
Sbjct: 3   SSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPP 121
           QREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQKELDATNADLVRYASG ARP 
Sbjct: 63  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP- 122

Query: 122 SQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 166
             YGRRA           SG+ F+SPL+SN   DPYCH+KEE N
Sbjct: 123 --YGRRAAA--------QSGVCFISPLNSNDRHDPYCHDKEEEN 155

[Close]

BLAST of IVF0013065 vs. ExPASy TrEMBL
Match: A0A6J1E293 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430146 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.0e-66
Identity = 132/164 (80.49%), Postives = 142/164 (86.59%), Query Frame = 0


Query: 2   ASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 61
           +SSS++NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PH
Sbjct: 3   SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPP 121
           QREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQKELDATNADLVRYASG ARP 
Sbjct: 63  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP- 122

Query: 122 SQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 166
             YGRRA           SG+ F+SPL++N   DPYC +KEE N
Sbjct: 123 --YGRRAAA--------QSGVCFISPLNTNDRHDPYCRDKEEQN 155

[Close]

BLAST of IVF0013065 vs. NCBI nr
Match: KAA0037575.1 (LOB domain-containing protein 25 [Cucumis melo var. makuwa] >TYK03097.1 LOB domain-containing protein 25 [Cucumis melo var. makuwa])

HSP 1 Score: 334 bits (856), Expect = 1.52e-115
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165
           PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN
Sbjct: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165

[Close]

BLAST of IVF0013065 vs. NCBI nr
Match: XP_008458802.1 (PREDICTED: LOB domain-containing protein 25 [Cucumis melo] >XP_016902322.1 PREDICTED: LOB domain-containing protein 25 [Cucumis melo])

HSP 1 Score: 332 bits (851), Expect = 8.81e-115
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165
           PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHE EEGN
Sbjct: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHENEEGN 165

[Close]

BLAST of IVF0013065 vs. NCBI nr
Match: XP_011655399.1 (LOB domain-containing protein 25 [Cucumis sativus])

HSP 1 Score: 320 bits (819), Expect = 6.46e-110
Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165
           PSQYGRRATTASVS TRHHSGLSFLSPLSS+HHD  YCH+KEEGN
Sbjct: 121 PSQYGRRATTASVS-TRHHSGLSFLSPLSSSHHDSTYCHDKEEGN 164

[Close]

BLAST of IVF0013065 vs. NCBI nr
Match: XP_038890699.1 (LOB domain-containing protein 25-like [Benincasa hispida] >XP_038890700.1 LOB domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 309 bits (791), Expect = 1.16e-105
Identity = 154/165 (93.33%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSY+NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASG ARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGGARP 120

Query: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165
           PSQ+GRRA TAS+  TRHHSGLSFLSPLSSN HD  YCH+KEEGN
Sbjct: 121 PSQFGRRAATASI--TRHHSGLSFLSPLSSNDHDASYCHDKEEGN 163

[Close]

BLAST of IVF0013065 vs. NCBI nr
Match: KAE8648553.1 (hypothetical protein Csa_009000 [Cucumis sativus])

HSP 1 Score: 266 bits (680), Expect = 4.28e-89
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTAS 132
           PSQYGRRATTAS
Sbjct: 121 PSQYGRRATTAS 132

[Close]

BLAST of IVF0013065 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-54
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 4   SSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQR 63
           S+YTNSPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASG-SARPPS 123
           EDAVNSLAYEAEAR+KDPVYGCVGAISVLQRQV+RLQ+EL+ TNADL+RYA        S
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTS 152

Query: 124 QYGRR 128
            YG R
Sbjct: 153 AYGGR 157

[Close]

BLAST of IVF0013065 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of IVF0013065 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of IVF0013065 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of IVF0013065 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

The following BLAST results are available for this feature:

BLAST of IVF0013065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	2.2e-53	80.80	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	2.5e-49	85.09	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	2.9e-42	70.43	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	5.2e-39	62.93	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A2WXT0	1.5e-38	57.04	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]

BLAST of IVF0013065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T800	2.1e-88	100.00	LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C8P8	8.2e-88	99.39	LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV...	[more]
A0A0A0KSE8	4.2e-84	96.97	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV...	[more]
A0A6J1JRR4	5.5e-68	82.32	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148774...	[more]
A0A6J1E293	3.0e-66	80.49	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]

BLAST of IVF0013065 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037575.1	1.52e-115	100.00	LOB domain-containing protein 25 [Cucumis melo var. makuwa] >TYK03097.1 LOB doma...	[more]
XP_008458802.1	8.81e-115	99.39	PREDICTED: LOB domain-containing protein 25 [Cucumis melo] >XP_016902322.1 PREDI...	[more]
XP_011655399.1	6.46e-110	96.97	LOB domain-containing protein 25 [Cucumis sativus]	[more]
XP_038890699.1	1.16e-105	93.33	LOB domain-containing protein 25-like [Benincasa hispida] >XP_038890700.1 LOB do...	[more]
KAE8648553.1	4.28e-89	100.00	hypothetical protein Csa_009000 [Cucumis sativus]	[more]

BLAST of IVF0013065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	1.5e-54	80.80	LOB domain-containing protein 25	[more]
AT5G63090.2	1.8e-50	85.09	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	1.8e-50	85.09	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	1.8e-50	85.09	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	1.8e-50	85.09	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..165
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 1..132
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..132
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..106 e-value: 9.5E-42 score: 141.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.540741

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013065.2	IVF0013065.2	mRNA