IVF0013027 (gene) Melon (IVF77) v1

Overview


Name	IVF0013027
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	UPF0098 protein
Location	chr04: 31923507 .. 31924184 (+)
RNA-Seq Expression	IVF0013027
Synteny	IVF0013027

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGATAACGGGGAGTTCAGGTTGGCGTCTTCAGCAATAGACCACGAAGGAAGGTTGCCAAGAAAATACACATCGGAAGGGCAAGGAGCGCAGAAGAACAAATCTCCGCCTTTGGAATGGTACAATTTACCTGAAGGGACCAAGACCCTGGCTCTTGTGGTGCAGGACATTGACGCACCGGACCCCAACGGCCCGATCGTGCCGTGGACCGTGTGGGTGGTTGTGAACATACCGGCTACCTTGAAGGGCCTCCCCGAAGATTTCTCTGGGAACCAACAGGGGCTTGGTGGTGATTATGCAGCTATTCAAGAGGGAAATAATGACGACAAAGTCCCTGGTTGGCGTGCCCCTACTTTGCCTTCACATGGCCACCGCTTTGAGTTCAAGCTCTACGCTTTAGATGACCATTTGAACCTCGGCAATAAGGTCAATTTCGTCCTTTTTCTTCTTTTATGTTTTAATATCACACCCTAGTTCAGTTCGATTCTATGATATAATCAAATTGTTTCAATTTCGTAGCCATCGATGTTATTTGAAGGAACAATTGGTAAATACTATTGTGGAGATTCTAAATAATGATTCCATCCCTTTCACTTGCAGGCGACAAAGGAGAAGCTGTTAGAAGCAATAGAAGGACACGTGCTGGGAGAAGCCGTATTAATGGCGGTCTTCTGA

mRNA sequence

ATGGGCGATAACGGGGAGTTCAGGTTGGCGTCTTCAGCAATAGACCACGAAGGAAGGTTGCCAAGAAAATACACATCGGAAGGGCAAGGAGCGCAGAAGAACAAATCTCCGCCTTTGGAATGGTACAATTTACCTGAAGGGACCAAGACCCTGGCTCTTGTGGTGCAGGACATTGACGCACCGGACCCCAACGGCCCGATCGTGCCGTGGACCGTGTGGGTGGTTGTGAACATACCGGCTACCTTGAAGGGCCTCCCCGAAGATTTCTCTGGGAACCAACAGGGGCTTGGTGGTGATTATGCAGCTATTCAAGAGGGAAATAATGACGACAAAGTCCCTGGTTGGCGTGCCCCTACTTTGCCTTCACATGGCCACCGCTTTGAGTTCAAGCTCTACGCTTTAGATGACCATTTGAACCTCGGCAATAAGGCGACAAAGGAGAAGCTGTTAGAAGCAATAGAAGGACACGTGCTGGGAGAAGCCGTATTAATGGCGGTCTTCTGA

Coding sequence (CDS)

ATGGGCGATAACGGGGAGTTCAGGTTGGCGTCTTCAGCAATAGACCACGAAGGAAGGTTGCCAAGAAAATACACATCGGAAGGGCAAGGAGCGCAGAAGAACAAATCTCCGCCTTTGGAATGGTACAATTTACCTGAAGGGACCAAGACCCTGGCTCTTGTGGTGCAGGACATTGACGCACCGGACCCCAACGGCCCGATCGTGCCGTGGACCGTGTGGGTGGTTGTGAACATACCGGCTACCTTGAAGGGCCTCCCCGAAGATTTCTCTGGGAACCAACAGGGGCTTGGTGGTGATTATGCAGCTATTCAAGAGGGAAATAATGACGACAAAGTCCCTGGTTGGCGTGCCCCTACTTTGCCTTCACATGGCCACCGCTTTGAGTTCAAGCTCTACGCTTTAGATGACCATTTGAACCTCGGCAATAAGGCGACAAAGGAGAAGCTGTTAGAAGCAATAGAAGGACACGTGCTGGGAGAAGCCGTATTAATGGCGGTCTTCTGA

Protein sequence

MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDAPDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTLPSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF

Homology

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BLAST of IVF0013027 vs. ExPASy Swiss-Prot
Match: O26373 (UPF0098 protein MTH_273 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_273 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24
Identity = 68/159 (42.77%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 9   LASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDAPDPNGPIV 68
           L + A +  GR+P +YT +G+    N SPPL W  +P   K+LAL+  D DAP       
Sbjct: 3   LKTHAFNDRGRIPSRYTCDGE----NISPPLSWDGVPGEAKSLALICDDPDAPSK----- 62

Query: 69  PWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTLPSHGHRFE 128
            WT WV+ NIP    GL E    N    G       +G ND    G+R P  PS  HR+ 
Sbjct: 63  VWTHWVIFNIPPDSTGLEE----NVPDAGRLPDGSVQGYNDSGTLGYRGPCPPSGVHRYF 122

Query: 129 FKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
           F+LYALD  L+L   A+KE +LEA+EGHVLGEA L+ ++
Sbjct: 123 FRLYALDTVLDLEPGASKEDVLEAMEGHVLGEAKLIGLY 148

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BLAST of IVF0013027 vs. ExPASy Swiss-Prot
Match: Q9PLJ0 (UPF0098 protein TC_0109 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=TC_0109 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 56/160 (35.00%), Postives = 80/160 (50.00%), Query Frame = 0


Query: 8   RLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDAPDPNGPI 67
           +L S A  +   +P+KY+ +G G     SPPL + ++P   K+LAL+V+D D P      
Sbjct: 2   QLTSQAFSYGRPIPKKYSCQGVGI----SPPLSFSDIPSEAKSLALIVEDPDVPANVRED 61

Query: 68  VPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTLPSHGHRF 127
             W  W+V N+   +  L E         G    A+Q  N   ++ G+  P  P   HR+
Sbjct: 62  GLWIHWIVYNLSPIVSNLAE---------GAQIFAVQGINTAGEI-GYCPPCPPDAKHRY 121

Query: 128 EFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
            F  YALD  L      TKE+LLEA+EGH+L  A LM  +
Sbjct: 122 YFYAYALDVVLPEEEGVTKEQLLEAMEGHILATAELMGTY 147

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BLAST of IVF0013027 vs. ExPASy Swiss-Prot
Match: Q9Z729 (UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906 OS=Chlamydia pneumoniae OX=83558 GN=CPn_0877 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.8e-16
Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 0


Query: 8   RLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDAPDPNGPI 67
           +L S A  +   +P+KYT +G G     SPPL + ++P   ++LAL+V+D D P      
Sbjct: 2   QLLSPAFAYGAPIPKKYTCQGAGI----SPPLTFVDVPGAAQSLALIVEDPDVPKEIRSD 61

Query: 68  VPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTLPSHGHRF 127
             W  W+V N+  T+  L E         G +  A+Q G N    P +  P  P   HR+
Sbjct: 62  GLWIHWIVYNLSTTITNLAE---------GAEIFAVQ-GLNTSGKPVYEGPCPPDKQHRY 121

Query: 128 EFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
            F L+ALD  L      T+++L EA+E H++ +A LM  +
Sbjct: 122 FFTLFALDVVLPEEENVTRDQLYEAMEFHIIEQAELMGTY 147

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BLAST of IVF0013027 vs. ExPASy Swiss-Prot
Match: O84741 (UPF0098 protein CT_736 OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=CT_736 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.1e-16
Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 0


Query: 8   RLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDAPDPNGPI 67
           +L S A  +   +P+KY+ +G G     SPPL + ++P   K+L L+V+D D P      
Sbjct: 2   QLTSQAFSYGRPIPKKYSCQGVGI----SPPLSFSDVPREAKSLVLIVEDPDVPPSVRED 61

Query: 68  VPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTLPSHGHRF 127
             W  W+V N+   +  L E         G    A+Q  N   ++ G+  P  P   HR+
Sbjct: 62  GLWIHWIVYNLSPVVSNLAE---------GAQIFAVQGLNTAGEI-GYCPPCPPDAKHRY 121

Query: 128 EFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
            F  YALD  L+     TKE+LLEA++GH++  A LM  +
Sbjct: 122 YFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELMGTY 147

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BLAST of IVF0013027 vs. ExPASy Swiss-Prot
Match: Q9UZJ3 (UPF0098 protein PYRAB11530 OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=PYRAB11530 PE=3 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 9.9e-14
Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 0


Query: 2   GDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDAP 61
           G   E    SS   ++  +P KYT EG     + +PPL    + E  K+L ++V      
Sbjct: 20  GGGEEMVKVSSVFGNDEFIPAKYTCEG----IDVNPPLRIEGISENAKSLVIIVD----- 79

Query: 62  DPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTLP 121
           DP+ P+  +T W+  NIP  ++ +PE     +QG       + +G ND    G+  P  P
Sbjct: 80  DPDAPLGTFTHWIAWNIP-PVEEIPEGIP--KQGEVEKPIHMIQGRNDFGRIGYNGPCPP 139

Query: 122 -SHG-HRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
             HG H + FK+Y LD  LNL   AT+E+L +A+EGH++    L+ ++
Sbjct: 140 RGHGVHHYHFKVYVLDTTLNLRPGATREELEKAMEGHIIQFGELVGLY 175

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BLAST of IVF0013027 vs. ExPASy TrEMBL
Match: A0A5A7TL06 (UPF0098 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00550 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.0e-93
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA
Sbjct: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL
Sbjct: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
           PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167

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BLAST of IVF0013027 vs. ExPASy TrEMBL
Match: A0A1S3B537 (UPF0098 protein TC_0109 OS=Cucumis melo OX=3656 GN=LOC103486265 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.0e-93
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA
Sbjct: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL
Sbjct: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
           PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167

[Close]

BLAST of IVF0013027 vs. ExPASy TrEMBL
Match: A0A0A0L9T7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730940 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 160/167 (95.81%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           MGDNGEFRL SSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLP+GTKTLALVVQDIDA
Sbjct: 1   MGDNGEFRLVSSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPKGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           PDP+GPIVPWTVWVVVNIP TLKGLPEDFSGNQQGLGGDYA IQEGNND+KVPGWRAPTL
Sbjct: 61  PDPSGPIVPWTVWVVVNIPPTLKGLPEDFSGNQQGLGGDYATIQEGNNDEKVPGWRAPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
           PSHGHRFEFKLYALDDHLNLGNKATK+KLLEAIEGHVLGEAVLMAVF
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKATKDKLLEAIEGHVLGEAVLMAVF 167

[Close]

BLAST of IVF0013027 vs. ExPASy TrEMBL
Match: A0A6J1IX32 (uncharacterized protein LOC111481441 OS=Cucurbita maxima OX=3661 GN=LOC111481441 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81
Identity = 146/167 (87.43%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           M D+ EFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYN+P+GTKTLALVVQDIDA
Sbjct: 1   MADSDEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           P+P+ PIVPWTVWVVVNIP +LKGLPEDFSGNQQGLG DYAAIQEGNNDDK+PGWR PTL
Sbjct: 61  PNPDRPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYAAIQEGNNDDKIPGWRVPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
           PS GHRFEFKLYALDD +NLGNK +KEKLL+ IEGHVLGEAVLMA+F
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPSKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of IVF0013027 vs. ExPASy TrEMBL
Match: A0A6J1CW59 (uncharacterized protein LOC111015122 OS=Momordica charantia OX=3673 GN=LOC111015122 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.5e-81
Identity = 144/167 (86.23%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           M D+ +FRL SSAIDHEGRLPRKYTSEGQG QKNKSPPLEWYN+P+GTK+LALVVQDIDA
Sbjct: 1   MADSEDFRLVSSAIDHEGRLPRKYTSEGQGTQKNKSPPLEWYNVPKGTKSLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           PDP GPIVPWTVWVV+NIP TLKGLPEDFSG  + LG DYAAIQEGNND+K+PGWRAPTL
Sbjct: 61  PDPQGPIVPWTVWVVLNIPPTLKGLPEDFSGKHEALGADYAAIQEGNNDEKIPGWRAPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 168
           PSHGHRFEFKLYALDD LNLG+KATK+KLL+AIEGHVLGEAVLMAVF
Sbjct: 121 PSHGHRFEFKLYALDDQLNLGHKATKDKLLDAIEGHVLGEAVLMAVF 167

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BLAST of IVF0013027 vs. NCBI nr
Match: XP_008442384.1 (PREDICTED: UPF0098 protein TC_0109 [Cucumis melo] >KAA0044193.1 UPF0098 protein [Cucumis melo var. makuwa] >TYK24939.1 UPF0098 protein [Cucumis melo var. makuwa])

HSP 1 Score: 350 bits (897), Expect = 9.88e-122
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA
Sbjct: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL
Sbjct: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167
           PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167

[Close]

BLAST of IVF0013027 vs. NCBI nr
Match: XP_004137699.1 (uncharacterized protein LOC101207571 [Cucumis sativus] >KGN58730.1 hypothetical protein Csa_002062 [Cucumis sativus])

HSP 1 Score: 338 bits (868), Expect = 2.62e-117
Identity = 160/167 (95.81%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           MGDNGEFRL SSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLP+GTKTLALVVQDIDA
Sbjct: 1   MGDNGEFRLVSSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPKGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           PDP+GPIVPWTVWVVVNIP TLKGLPEDFSGNQQGLGGDYA IQEGNND+KVPGWRAPTL
Sbjct: 61  PDPSGPIVPWTVWVVVNIPPTLKGLPEDFSGNQQGLGGDYATIQEGNNDEKVPGWRAPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167
           PSHGHRFEFKLYALDDHLNLGNKATK+KLLEAIEGHVLGEAVLMAVF
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKATKDKLLEAIEGHVLGEAVLMAVF 167

[Close]

BLAST of IVF0013027 vs. NCBI nr
Match: XP_038904153.1 (UPF0098 protein TC_0109 [Benincasa hispida])

HSP 1 Score: 335 bits (858), Expect = 8.77e-116
Identity = 159/167 (95.21%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           M D+G FRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA
Sbjct: 1   MADSGVFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           PDP+GPIVPWTVWVVVNIP TLKGLPEDFSGNQQGLGGDYAAIQEGNND+KVPGWRAPTL
Sbjct: 61  PDPSGPIVPWTVWVVVNIPPTLKGLPEDFSGNQQGLGGDYAAIQEGNNDEKVPGWRAPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167
           PSHGHRFEFKLYALDDHLNLGNK TKEKLL+AIEGHVLGEAVLMAVF
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKVTKEKLLDAIEGHVLGEAVLMAVF 167

[Close]

BLAST of IVF0013027 vs. NCBI nr
Match: XP_023529183.1 (uncharacterized protein LOC111791902 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313 bits (802), Expect = 3.04e-107
Identity = 147/167 (88.02%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           M D+ EFRLASSAIDHEGRLPRKYTSEGQGAQKN+SPPLEWYN+P+GTKTLALVVQDIDA
Sbjct: 1   MADSEEFRLASSAIDHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           P+P+GPIVPWTVWVVVNIP +LKGLPEDFSGNQQGLG DYAAIQEGNNDDK+PGWR PTL
Sbjct: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYAAIQEGNNDDKIPGWRVPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167
           PS GHRFEFKLYALDD +NLGNK TKEKLL+ IEGHVLGEAVLMA+F
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of IVF0013027 vs. NCBI nr
Match: XP_022982617.1 (uncharacterized protein LOC111481441 [Cucurbita maxima])

HSP 1 Score: 310 bits (794), Expect = 5.04e-106
Identity = 146/167 (87.43%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60
           M D+ EFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYN+P+GTKTLALVVQDIDA
Sbjct: 1   MADSDEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120
           P+P+ PIVPWTVWVVVNIP +LKGLPEDFSGNQQGLG DYAAIQEGNNDDK+PGWR PTL
Sbjct: 61  PNPDRPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYAAIQEGNNDDKIPGWRVPTL 120

Query: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167
           PS GHRFEFKLYALDD +NLGNK +KEKLL+ IEGHVLGEAVLMA+F
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPSKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of IVF0013027 vs. TAIR 10
Match: AT5G01300.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 235.7 bits (600), Expect = 2.6e-62
Identity = 109/158 (68.99%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 6   EFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDAPDPNG 65
           E RL S  ID++G+LPRKYT  GQG +K+ SPPLEWYN+PEGTKTLALVV+DIDAPDP+G
Sbjct: 5   ELRLVSPTIDNDGKLPRKYTMAGQGVKKDISPPLEWYNVPEGTKTLALVVEDIDAPDPSG 64

Query: 66  PIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTLPSHGH 125
           P+VPWTVWVVV+IP  +KGLPE +SGN+    G    I+EGNND K+PGWR P LPSHGH
Sbjct: 65  PLVPWTVWVVVDIPPEMKGLPEGYSGNEDQTTG----IREGNNDHKIPGWRGPLLPSHGH 124

Query: 126 RFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVL 164
           RF+FKL+ALDD   +G+  TKE+LL AIEGHVLGEA+L
Sbjct: 125 RFQFKLFALDDKPKIGHTVTKERLLIAIEGHVLGEAIL 158

[Close]

BLAST of IVF0013027 vs. TAIR 10
Match: AT5G01300.2 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.4e-47
Identity = 86/122 (70.49%), Postives = 102/122 (83.61%), Query Frame = 0


Query: 42  YNLPEGTKTLALVVQDIDAPDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYA 101
           YN+PEGTKTLALVV+DIDAPDP+GP+VPWTVWVVV+IP  +KGLPE +SGN+    G   
Sbjct: 7   YNVPEGTKTLALVVEDIDAPDPSGPLVPWTVWVVVDIPPEMKGLPEGYSGNEDQTTG--- 66

Query: 102 AIQEGNNDDKVPGWRAPTLPSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEA 161
            I+EGNND K+PGWR P LPSHGHRF+FKL+ALDD   +G+  TKE+LL AIEGHVLGEA
Sbjct: 67  -IREGNNDHKIPGWRGPLLPSHGHRFQFKLFALDDKPKIGHTVTKERLLIAIEGHVLGEA 124

Query: 162 VL 164
           +L
Sbjct: 127 IL 124

The following BLAST results are available for this feature:

BLAST of IVF0013027 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O26373	1.6e-24	42.77	UPF0098 protein MTH_273 OS=Methanothermobacter thermautotrophicus (strain ATCC 2...	[more]
Q9PLJ0	2.1e-16	35.00	UPF0098 protein TC_0109 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN...	[more]
Q9Z729	4.8e-16	33.13	UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906 OS=Chlamydia pneumoniae OX=8355...	[more]
O84741	8.1e-16	33.13	UPF0098 protein CT_736 OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=...	[more]
Q9UZJ3	9.9e-14	32.74	UPF0098 protein PYRAB11530 OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 G...	[more]

BLAST of IVF0013027 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TL06	5.0e-93	100.00	UPF0098 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0055...	[more]
A0A1S3B537	5.0e-93	100.00	UPF0098 protein TC_0109 OS=Cucumis melo OX=3656 GN=LOC103486265 PE=4 SV=1	[more]
A0A0A0L9T7	1.2e-89	95.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730940 PE=4 SV=1	[more]
A0A6J1IX32	4.4e-81	87.43	uncharacterized protein LOC111481441 OS=Cucurbita maxima OX=3661 GN=LOC111481441...	[more]
A0A6J1CW59	7.5e-81	86.23	uncharacterized protein LOC111015122 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of IVF0013027 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442384.1	9.88e-122	100.00	PREDICTED: UPF0098 protein TC_0109 [Cucumis melo] >KAA0044193.1 UPF0098 protein ...	[more]
XP_004137699.1	2.62e-117	95.81	uncharacterized protein LOC101207571 [Cucumis sativus] >KGN58730.1 hypothetical ...	[more]
XP_038904153.1	8.77e-116	95.21	UPF0098 protein TC_0109 [Benincasa hispida]	[more]
XP_023529183.1	3.04e-107	88.02	uncharacterized protein LOC111791902 [Cucurbita pepo subsp. pepo]	[more]
XP_022982617.1	5.04e-106	87.43	uncharacterized protein LOC111481441 [Cucurbita maxima]	[more]

BLAST of IVF0013027 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01300.1	2.6e-62	68.99	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G01300.2	1.4e-47	70.49	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 20..167 e-value: 5.4E-28 score: 97.9
IPR005247	YbhB/YbcL	TIGRFAM	TIGR00481	TIGR00481	coord: 32..166 e-value: 1.5E-29 score: 100.6
IPR005247	YbhB/YbcL	PANTHER	PTHR30289	UNCHARACTERIZED PROTEIN YBCL-RELATED	coord: 6..167
IPR005247	YbhB/YbcL	CDD	cd00865	PEBP_bact_arch	coord: 8..167 e-value: 2.32017E-47 score: 149.288
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 2..167 e-value: 7.0E-43 score: 148.3
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 7..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..40
None	No IPR available	PANTHER	PTHR30289:SF1	PEBP (PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN) FAMILY PROTEIN	coord: 6..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013027.2	IVF0013027.2	mRNA