IVF0013007 (gene) Melon (IVF77) v1

Overview
NameIVF0013007
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Locationchr09: 13515083 .. 13515364 (+)
RNA-Seq ExpressionIVF0013007
SyntenyIVF0013007
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACATCGGATATAAAAACGTTGAGAGTAGTTATTTCCGACGCATAGCTGACGTCGAAACTATGGACGTCGGGGATGGCTTATTGCCAACGCATCGAAGACATCGGGAGAAGATTATTCTCGATGTTTTATTGGTGTCGCGTGGGGAATCGGTCTCTCAATGCGTTTCTTTCAACGGTCTTCTCAACGTTCCTTTCAATGTCGAAAATTCGTTTTCCGACGTCTTTACCACTTATGTTAACGTTTTTATGCGTCGGGAGTCTCCCCATTTTTTGTAG

mRNA sequence

ATGGCCGACATCGGATATAAAAACGTTGAGAGTAGTTATTTCCGACGCATAGCTGACGTCGAAACTATGGACGTCGGGGATGGCTTATTGCCAACGCATCGAAGACATCGGGAGAAGATTATTCTCGATGTTTTATTGGTGTCGCGTGGGGAATCGGTCTCTCAATGCGTTTCTTTCAACGGTCTTCTCAACGTTCCTTTCAATGTCGAAAATTCGTTTTCCGACGTCTTTACCACTTATGTTAACGTTTTTATGCGTCGGGAGTCTCCCCATTTTTTGTAG

Coding sequence (CDS)

ATGGCCGACATCGGATATAAAAACGTTGAGAGTAGTTATTTCCGACGCATAGCTGACGTCGAAACTATGGACGTCGGGGATGGCTTATTGCCAACGCATCGAAGACATCGGGAGAAGATTATTCTCGATGTTTTATTGGTGTCGCGTGGGGAATCGGTCTCTCAATGCGTTTCTTTCAACGGTCTTCTCAACGTTCCTTTCAATGTCGAAAATTCGTTTTCCGACGTCTTTACCACTTATGTTAACGTTTTTATGCGTCGGGAGTCTCCCCATTTTTTGTAG

Protein sequence

MADIGYKNVESSYFRRIADVETMDVGDGLLPTHRRHREKIILDVLLVSRGESVSQCVSFNGLLNVPFNVENSFSDVFTTYVNVFMRRESPHFL
Homology
BLAST of IVF0013007 vs. ExPASy TrEMBL
Match: A0A5A7VFB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001910 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.3e-09
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0

Query: 9   VESSYFRRIADVETMDVGDGLLPTHRRHREKIILDVLLVS---RGESVSQCVSFNGLLNV 68
           V   Y+RRIA ++ +DVGD LL T RR  +KII + LLV+   R ESVS+ VS N   ++
Sbjct: 62  VGDGYYRRIAYIKIVDVGDALLATRRRRWKKIIPNALLVTHRRRQESVSRRVSSNDRPDI 121

Query: 69  PFNVENSFSDVFTTYVNVFM 86
           P  +ENS SD F T+ +VFM
Sbjct: 122 PLCIENSVSDDFATFTDVFM 141

BLAST of IVF0013007 vs. ExPASy TrEMBL
Match: A0A5D3CTJ0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00180 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.1e-07
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 29  LLPTHRRH-----REKIILDVLLVSRGESVSQCVSFNGLLNVPFNVENSFSDVFTTYVNV 88
           +LPTHR H     REK+I D L + R E  S+ +S + +LN+ F VE S+ DVF+T  +V
Sbjct: 162 VLPTHRWHRKRIRREKVIPDALFMMRWELFSRHISSDDVLNIVFCVEKSYPDVFSTSTDV 221

Query: 89  FMRRESPHFL 94
           ++RRESP FL
Sbjct: 222 YVRRESPQFL 231

BLAST of IVF0013007 vs. ExPASy TrEMBL
Match: A0A5A7VJI4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00280 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.4e-06
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 0

Query: 18  ADVETMDVGDGLLPTHRRH-----REKIILDVLLVSRGESVSQCVSFNGLLNVPFNVENS 77
           +DV   D G+ LL T R+H     R K+ILD L + R E  S+ +S + + +V F V  S
Sbjct: 161 SDVGNEDFGNYLLQTQRQHWKGVRRNKVILDALFMKRREMFSRRISSDDVSDVAFCVGKS 220

Query: 78  FSDVFTTYVNVFMRRESPHFL 94
           + DVF+T V+V + RESP FL
Sbjct: 221 YPDVFSTSVDVCVHRESPQFL 241

BLAST of IVF0013007 vs. ExPASy TrEMBL
Match: A0A5D3DXG9 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00880 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.9e-05
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 45 LLVSRGESVSQCVSFNGLLNVPFNVENSFSDVFTTYVNVFMRRESPHFL 94
          LLV+  ES+S  VS + L +V F +ENS  DV  TYV+VFMRRESPHFL
Sbjct: 27 LLVTHQESLSLRVSSDDLPDVAFCIENSVPDVINTYVDVFMRRESPHFL 75

BLAST of IVF0013007 vs. NCBI nr
Match: KAA0065797.1 (uncharacterized protein E6C27_scaffold37G00960 [Cucumis melo var. makuwa] >TYJ96536.1 uncharacterized protein E5676_scaffold546G001910 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 6.23e-13
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0

Query: 9   VESSYFRRIADVETMDVGDGLLPTHRRHREKIILDVLLVS---RGESVSQCVSFNGLLNV 68
           V   Y+RRIA ++ +DVGD LL T RR  +KII + LLV+   R ESVS+ VS N   ++
Sbjct: 62  VGDGYYRRIAYIKIVDVGDALLATRRRRWKKIIPNALLVTHRRRQESVSRRVSSNDRPDI 121

Query: 69  PFNVENSFSDVFTTYVNVFM 85
           P  +ENS SD F T+ +VFM
Sbjct: 122 PLCIENSVSDDFATFTDVFM 141

BLAST of IVF0013007 vs. NCBI nr
Match: KAA0033282.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK14825.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 3.43e-10
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0

Query: 7   KNVESSYFRRIADVETMDVGDGLLPTHRRHR-----EKIILDVLLVSRGESVSQCVSFNG 66
           K   +S       V    + + +LPTHR HR     EK+I D L + R E  S+ +S + 
Sbjct: 140 KTTSASSSSTSCGVRNDGIENYVLPTHRWHRKRIRREKVIPDALFMMRWELFSRHISSDD 199

Query: 67  LLNVPFNVENSFSDVFTTYVNVFMRRESPHFL 93
           +LN+ F VE S+ DVF+T  +V++RRESP FL
Sbjct: 200 VLNIVFCVEKSYPDVFSTSTDVYVRRESPQFL 231

BLAST of IVF0013007 vs. NCBI nr
Match: KAA0067514.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK22431.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.45e-08
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 0

Query: 18  ADVETMDVGDGLLPTHRRH-----REKIILDVLLVSRGESVSQCVSFNGLLNVPFNVENS 77
           +DV   D G+ LL T R+H     R K+ILD L + R E  S+ +S + + +V F V  S
Sbjct: 161 SDVGNEDFGNYLLQTQRQHWKGVRRNKVILDALFMKRREMFSRRISSDDVSDVAFCVGKS 220

Query: 78  FSDVFTTYVNVFMRRESPHFL 93
           + DVF+T V+V + RESP FL
Sbjct: 221 YPDVFSTSVDVCVHRESPQFL 241

BLAST of IVF0013007 vs. NCBI nr
Match: TYK28456.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 3.83e-08
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 45 LLVSRGESVSQCVSFNGLLNVPFNVENSFSDVFTTYVNVFMRRESPHFL 93
          LLV+  ES+S  VS + L +V F +ENS  DV  TYV+VFMRRESPHFL
Sbjct: 27 LLVTHQESLSLRVSSDDLPDVAFCIENSVPDVINTYVDVFMRRESPHFL 75

BLAST of IVF0013007 vs. NCBI nr
Match: KAA0033895.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 53.1 bits (126), Expect = 1.32e-05
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0

Query: 19  DVETMDVGDGLLPTHRRHREKIILDVLLVSRGESVSQCVSFNGLLNVPFNVENSF 73
           DVE +D+GD LL T RRH +KI  D LLV+  +SVSQ V  +G  +VPF +E  F
Sbjct: 268 DVEIVDIGDDLLTTPRRHWKKINPDALLVTCRKSVSQRVPSDGCPDVPFCIEIRF 322

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VFB03.3e-0950.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CTJ03.1e-0748.57CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7VJI43.4e-0643.21CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3DXG94.9e-0561.22Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
Match NameE-valueIdentityDescription
KAA0065797.16.23e-1350.00uncharacterized protein E6C27_scaffold37G00960 [Cucumis melo var. makuwa] >TYJ96... [more]
KAA0033282.13.43e-1040.22CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK14825.1 CACTA en-... [more]
KAA0067514.11.45e-0843.21CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK22431.1 CACTA en-... [more]
TYK28456.13.83e-0861.22subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa][more]
KAA0033895.11.32e-0552.73CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0013007.1IVF0013007.1mRNA