IVF0013007 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACATCGGATATAAAAACGTTGAGAGTAGTTATTTCCGACGCATAGCTGACGTCGAAACTATGGACGTCGGGGATGGCTTATTGCCAACGCATCGAAGACATCGGGAGAAGATTATTCTCGATGTTTTATTGGTGTCGCGTGGGGAATCGGTCTCTCAATGCGTTTCTTTCAACGGTCTTCTCAACGTTCCTTTCAATGTCGAAAATTCGTTTTCCGACGTCTTTACCACTTATGTTAACGTTTTTATGCGTCGGGAGTCTCCCCATTTTTTGTAG ATGGCCGACATCGGATATAAAAACGTTGAGAGTAGTTATTTCCGACGCATAGCTGACGTCGAAACTATGGACGTCGGGGATGGCTTATTGCCAACGCATCGAAGACATCGGGAGAAGATTATTCTCGATGTTTTATTGGTGTCGCGTGGGGAATCGGTCTCTCAATGCGTTTCTTTCAACGGTCTTCTCAACGTTCCTTTCAATGTCGAAAATTCGTTTTCCGACGTCTTTACCACTTATGTTAACGTTTTTATGCGTCGGGAGTCTCCCCATTTTTTGTAG ATGGCCGACATCGGATATAAAAACGTTGAGAGTAGTTATTTCCGACGCATAGCTGACGTCGAAACTATGGACGTCGGGGATGGCTTATTGCCAACGCATCGAAGACATCGGGAGAAGATTATTCTCGATGTTTTATTGGTGTCGCGTGGGGAATCGGTCTCTCAATGCGTTTCTTTCAACGGTCTTCTCAACGTTCCTTTCAATGTCGAAAATTCGTTTTCCGACGTCTTTACCACTTATGTTAACGTTTTTATGCGTCGGGAGTCTCCCCATTTTTTGTAG MADIGYKNVESSYFRRIADVETMDVGDGLLPTHRRHREKIILDVLLVSRGESVSQCVSFNGLLNVPFNVENSFSDVFTTYVNVFMRRESPHFL Homology
BLAST of IVF0013007 vs. ExPASy TrEMBL
Match: A0A5A7VFB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001910 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.3e-09 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of IVF0013007 vs. ExPASy TrEMBL
Match: A0A5D3CTJ0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00180 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.1e-07 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of IVF0013007 vs. ExPASy TrEMBL
Match: A0A5A7VJI4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00280 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.4e-06 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of IVF0013007 vs. ExPASy TrEMBL
Match: A0A5D3DXG9 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00880 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.9e-05 Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of IVF0013007 vs. NCBI nr
Match: KAA0065797.1 (uncharacterized protein E6C27_scaffold37G00960 [Cucumis melo var. makuwa] >TYJ96536.1 uncharacterized protein E5676_scaffold546G001910 [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 6.23e-13 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of IVF0013007 vs. NCBI nr
Match: KAA0033282.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK14825.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 3.43e-10 Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0
BLAST of IVF0013007 vs. NCBI nr
Match: KAA0067514.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK22431.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 1.45e-08 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of IVF0013007 vs. NCBI nr
Match: TYK28456.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa]) HSP 1 Score: 56.6 bits (135), Expect = 3.83e-08 Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of IVF0013007 vs. NCBI nr
Match: KAA0033895.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 53.1 bits (126), Expect = 1.32e-05 Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|