IVF0012939 (gene) Melon (IVF77) v1

Overview


Name	IVF0012939
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	A-kinase anchor protein 12
Location	chr02: 6678290 .. 6678490 (+)
RNA-Seq Expression	IVF0012939
Synteny	IVF0012939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCAAGCACAAATTGGTTAACCATCTCTAGGTTGGTAGAAGCAGCCATGCGTGTTGAAAGTACGTTGGCTAAGGAAAAGAAGAGTTCCAAAGAGAAGAGATTGGGCAAGGAACCTATGCAAACAAAAGTAGCTTCTTACTCCGTTCATCAAGTATCACGAGGAGGTCCTATATGGGATAAAGGAAGTGGACGATAG

mRNA sequence

ATGACGTCAAGCACAAATTGGTTAACCATCTCTAGGTTGGTAGAAGCAGCCATGCGTGTTGAAAGTACGTTGGCTAAGGAAAAGAAGAGTTCCAAAGAGAAGAGATTGGGCAAGGAACCTATGCAAACAAAAGTAGCTTCTTACTCCGTTCATCAAGTATCACGAGGAGGTCCTATATGGGATAAAGGAAGTGGACGATAG

Coding sequence (CDS)

ATGACGTCAAGCACAAATTGGTTAACCATCTCTAGGTTGGTAGAAGCAGCCATGCGTGTTGAAAGTACGTTGGCTAAGGAAAAGAAGAGTTCCAAAGAGAAGAGATTGGGCAAGGAACCTATGCAAACAAAAGTAGCTTCTTACTCCGTTCATCAAGTATCACGAGGAGGTCCTATATGGGATAAAGGAAGTGGACGATAG

Protein sequence

MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIWDKGSGR

Homology

[Close]

BLAST of IVF0012939 vs. ExPASy TrEMBL
Match: A0A5D3DW18 (A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00250 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-24
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 60
           +TSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW
Sbjct: 116 VTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 175

Query: 61  DKG 64
           DKG
Sbjct: 176 DKG 178

[Close]

BLAST of IVF0012939 vs. ExPASy TrEMBL
Match: A0A5A7UNY4 (A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001510 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.7e-24
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 60
           +TSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKV SYSVHQVSRGGPIW
Sbjct: 116 VTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVVSYSVHQVSRGGPIW 175

Query: 61  DKG 64
           DKG
Sbjct: 176 DKG 178

[Close]

BLAST of IVF0012939 vs. ExPASy TrEMBL
Match: A0A5A7UNH7 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00470 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08
Identity = 39/63 (61.90%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 60
           MT+STNW T S+LVE           EKKSSKEKR  KEPM+  VAS+SVHQVS+GGP  
Sbjct: 56  MTASTNWSTFSKLVE-----------EKKSSKEKRFSKEPMRMGVASHSVHQVSQGGPTR 107

Query: 61  DKG 64
           DKG
Sbjct: 116 DKG 107

[Close]

BLAST of IVF0012939 vs. ExPASy TrEMBL
Match: A0A5A7V7B0 (Zf-CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2406G00240 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVS 55
           M + TNW T S+LVE  MR ES LA+EKKS +EKRL KEP + +VAS+S+H+VS
Sbjct: 98  MMACTNWPTFSKLVEVTMRFESALAEEKKSFREKRLSKEPTRMRVASHSIHEVS 151

[Close]

BLAST of IVF0012939 vs. ExPASy TrEMBL
Match: A0A5D3CIT6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00880 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-07
Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 60
           MT+STNW   S+           LA+EKKSSKEKRL KEPM+  VAS+ VHQVS+GGP  
Sbjct: 56  MTASTNWSIFSK-----------LAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQGGPTR 107

Query: 61  DKG 64
           DKG
Sbjct: 116 DKG 107

[Close]

BLAST of IVF0012939 vs. NCBI nr
Match: TYK27694.1 (A-kinase anchor protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (301), Expect = 1.69e-32
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 60
           +TSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW
Sbjct: 116 VTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 175

Query: 61  DKG 63
           DKG
Sbjct: 176 DKG 178

[Close]

BLAST of IVF0012939 vs. NCBI nr
Match: KAA0056006.1 (A-kinase anchor protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (297), Expect = 6.82e-32
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 60
           +TSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKV SYSVHQVSRGGPIW
Sbjct: 116 VTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVVSYSVHQVSRGGPIW 175

Query: 61  DKG 63
           DKG
Sbjct: 176 DKG 178

[Close]

BLAST of IVF0012939 vs. NCBI nr
Match: KAA0056157.1 (uncharacterized protein E6C27_scaffold697G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 7.96e-13
Identity = 39/63 (61.90%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 60
           MT+STNW T S+LVE           EKKSSKEKR  KEPM+  VAS+SVHQVS+GGP  
Sbjct: 56  MTASTNWSTFSKLVE-----------EKKSSKEKRFSKEPMRMGVASHSVHQVSQGGPTR 107

Query: 61  DKG 63
           DKG
Sbjct: 116 DKG 107

[Close]

BLAST of IVF0012939 vs. NCBI nr
Match: KAA0062867.1 (zf-CCHC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 2.40e-11
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVS 54
           M + TNW T S+LVE  MR ES LA+EKKS +EKRL KEP + +VAS+S+H+VS
Sbjct: 98  MMACTNWPTFSKLVEVTMRFESALAEEKKSFREKRLSKEPTRMRVASHSIHEVS 151

[Close]

BLAST of IVF0012939 vs. NCBI nr
Match: TYK11094.1 (uncharacterized protein E5676_scaffold73G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 5.22e-11
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 1   MTSSTNWLTISRLVEAAMRVESTLAKEKKSSKEKRLGKEPMQTKVASYSVHQVSRGGPIW 60
           MT+STNW   S+L E           EKKSSKEKRL KEPM+  VAS+ VHQVS+GGP  
Sbjct: 56  MTASTNWSIFSKLAE-----------EKKSSKEKRLSKEPMRMGVASHFVHQVSQGGPTR 107

Query: 61  DKG 63
           DKG
Sbjct: 116 DKG 107

The following BLAST results are available for this feature:

BLAST of IVF0012939 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0012939 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DW18	3.3e-24	98.41	A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7UNY4	9.7e-24	96.83	A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5A7UNH7	2.0e-08	61.90	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7V7B0	1.7e-07	61.11	Zf-CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CIT6	4.8e-07	58.73	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of IVF0012939 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK27694.1	1.69e-32	98.41	A-kinase anchor protein 12 [Cucumis melo var. makuwa]	[more]
KAA0056006.1	6.82e-32	96.83	A-kinase anchor protein 12 [Cucumis melo var. makuwa]	[more]
KAA0056157.1	7.96e-13	61.90	uncharacterized protein E6C27_scaffold697G00470 [Cucumis melo var. makuwa]	[more]
KAA0062867.1	2.40e-11	61.11	zf-CCHC domain-containing protein [Cucumis melo var. makuwa]	[more]
TYK11094.1	5.22e-11	58.73	uncharacterized protein E5676_scaffold73G00880 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0012939 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012939.1	IVF0012939.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity