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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCATGCAAAAGAGAGAAATGAGAGGCGGCCATTTCAGACGCACGCAGCGCGGCACTACCACGACCGACCACCACCGTGTACGTCGAATAGCGGTGGTTTTGGCAGTGGCGCGCCGCTGTACGTCCGAAGAGAACAACGCCTAATTATTTGA mRNA sequence ATGCATGCAAAAGAGAGAAATGAGAGGCGGCCATTTCAGACGCACGCAGCGCGGCACTACCACGACCGACCACCACCGTGTACGTCGAATAGCGGTGGTTTTGGCAGTGGCGCGCCGCTGTACGTCCGAAGAGAACAACGCCTAATTATTTGA Coding sequence (CDS) ATGCATGCAAAAGAGAGAAATGAGAGGCGGCCATTTCAGACGCACGCAGCGCGGCACTACCACGACCGACCACCACCGTGTACGTCGAATAGCGGTGGTTTTGGCAGTGGCGCGCCGCTGTACGTCCGAAGAGAACAACGCCTAATTATTTGA Protein sequence MHAKERNERRPFQTHAARHYHDRPPPCTSNSGGFGSGAPLYVRREQRLII
Homology
BLAST of IVF0012918 vs. ExPASy TrEMBL
Match: A0A0A0KW10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011760 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.4e-13 Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0
Query: 1 MHAKERNERRPFQTHAARHYHDRPPPCTSNSGGFGSGAPLYVRREQR 48
MHAK RN+RRPFQTHAA HYHDRPPP TS SGG GSG P YVRREQ+
Sbjct: 1 MHAKGRNKRRPFQTHAAGHYHDRPPPFTSESGGCGSGTPPYVRREQK 47
BLAST of IVF0012918 vs. NCBI nr
Match: KGN53029.1 (hypothetical protein Csa_014750 [Cucumis sativus]) HSP 1 Score: 82.4 bits (202), Expect = 2.18e-19 Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0
Query: 1 MHAKERNERRPFQTHAARHYHDRPPPCTSNSGGFGSGAPLYVRREQR 47
MHAK RN+RRPFQTHAA HYHDRPPP TS SGG GSG P YVRREQ+
Sbjct: 1 MHAKGRNKRRPFQTHAAGHYHDRPPPFTSESGGCGSGTPPYVRREQK 47
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KW10 | 3.4e-13 | 80.85 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011760 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN53029.1 | 2.18e-19 | 80.85 | hypothetical protein Csa_014750 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..40 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..22 |
Relationships
The following mRNA feature(s) are a part of this gene:
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