IVF0012893 (gene) Melon (IVF77) v1

Overview


Name	IVF0012893
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Rhomboid-like protein 11
Location	chr04: 2212912 .. 2216450 (+)
RNA-Seq Expression	IVF0012893
Synteny	IVF0012893

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTGTCCAATTGGCTTATCGCTCTCAAATTCCCAATGCAGTTTCAGTTGCAGCAGCTGCAGCTTCATGGAGGCCGAATTTCGAAACCTCCAACACTAAGCAACAACCAAATGCCTTTAACTTCCATTTCTCTTCAATCCAGCTTCACCTTAACCTCACTCAGATTTCCCTCTCCATTCTTCCATTCCCTTCCCCAATTTACCCATGTTCTTCCTCTCCACTCGCGTTCCTTTTGTATGAAACCCATCGCGACCTGCAAGATGAACGATGCAGGTTCTCTTTTTCTTTTTCCGCTTTTTGGAACAGTATCTTAATCTGTTTTGTTATGGTTTTATAGAGGAATTTTGCGATTTTGTTTGATGAAAGATGTGTGCGGTTGAATGAAAGTAAAAAAAGAATTTTGTGTTTTTTAAATGTTTGTTAGATTTGATATCACAGTTGGAGCTTGGAAAACCACTGCAGAATCGGAAAACGGAGAAGCGTGTTAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACATTTTTCAGGTAGGGTTTTTGTTCTCTTATGTTTACTTTTCTCGTTGTTGCCTTTCGATAGAGTGAAAAACAATTCCCTCAAAATTGATGGCTCTCTAAGCCCCCGTATTAGAGGTCAGGCCACTAGGGATTGATAGTTCAAGTTTTCTCATTGTGGAAGCTGAGGAACAAAGTTGCGCGACAGTAGCTGCAGCTCTTTTCTTTCAAGTAGGCGTAGCCCAGGAAATAGCTCGAGAAGCGTAATCCTTCTGATGATTCATATCCGGCAAATCAAAAAAATAAAACCATTTCGTTCAACATTTCCATCCTTTCCATCCAGATTTGAAAATGACTCATAGCACCCTTATTCCCACTCCAATTTTTCATATTTCATCTCCCGTTCAGAGATGTATCTGAGTAGGAAAGTTAGCCAATTTATCCTGCCTAGTTTAGACAAAGCAGCCCGCATCACAGACTTGAGATTCATTTGATGTTCATCAAGTGCTGCTGCATCCTCATAAGTTTCAATAAACTACGCCCTCCTCCTTCTCTTTTATAGCTATTCTTGAAGAAAGTCCACCGGTTGATAGTTTATTAAGTCTCCAAAGCTCTATGAGAGCCACTGAAAGTTCTCCAATTGCTCACCTTCCACTACTATCAAAGACGACAATCATTGCAGTTTTCCTCCGATACATACTTCAGCTTTTCTTTGAAGCATGGCTTCAAAGAAAATCCTTAACAATGACTTAGATAGTCTATGGCTTGCTCCAACAACAGCCGAACTTGTAAAATAGTTGTTCCCATAATATTGAAGCATAAGTAGAGCATAAGGATGCCTTTAGCATTCTCACTAGTCTTGCACAAAATACAACAATTGGGAAGAAGAAAAGAATCTAAAAACTGTTCTTTAAGTACATTATGGGGGAGTTGAGTTTCCACAACAAGTAGTTCATGAAAGCACTCTCACCTTTATTGGTTTGGTATCCTTTTCCTCAATAGTGTTTGGAGCCCTCAGAAGATGAACAAAGAGGGATTTACTCTTTCAAAACTTCCAAAAACGAAATCCTTTTGTCCTCTCTGGAATCAAGATCCATAATAGTCAACTAAACAGTCAAAACTCAATTTCCTTTCTGAAAGATTCATTCTAAGCCTATCCATGAATCCATGATTATTAACACATTTGGAAGTAGAAAAAAAAAAACAAACTCACTAGTAAGTATTTATACATGTATCACAAAATACTAAATGGTTATCAAACGTTGTCTAAAATTTCATTTTCGTAGGTTCGTAATATAGGAGCTTTGTACCTGTATCACAATCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCACGCTAATTGGTGAGTTTTTTGTGCTTTTCAAGATCATCCAAATTTCAGATTTCTCATCTACACTTAAATTCAGTGGAGTTTACACACACACACACACACAGGCAGAAGCTTCCATCTTCTCACGATAATGCAATTTGCTGCTTTTACAAGCATTGTTTGATGTAGTGCTTGCCATTCTGTGAATGTTTGCAGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGTGAGAAACACCTTTCAAATCATTATTATTTTTTCTCCCTATAATGGCATCAACTTTCTTTCTGGACATTGAAACCATAAAATAACCAAAATGTTTTGACATTTAGTTCCATTATGTGTGATCAACAGGGAAACTTGTTGAAGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACGTTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTTGGTTTGTTTACCATAAGTGTTCTTGTAAAGGTATCTATCTAAAACGTCTCTCATTAGGAATTGAATACAACATTTTTAATGAAGAAATTCCTTCGTGCCAGATGTCATGGGATTGGAGGAAGATACTTGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTAGTAATAAGTTCTCTTTTTGCCCTTATGTTCTTAAAAACGTAAATACTAAGCATCCTTCCCAAGTTGGGGATTGGCAGGTTGGGAAAGAAATACTAGGGCATAGGATATAATGTTCTTTCTTTCCATATCCCTAGTTAATTGCTAATTTATCATATCTTGATTTTCCTCTAATTCATTAGAACGAATTAGCATTGGCTTTCCTTTTCCTTTTCATAATATAGGGATCATCTTTTAATTGGCGTACGGTTCTCGAGACTTTTGTTATTCTTCTTTCCCACCTCCTTGGAAGCCCACCCTTTCCAGAAGGAAAGAAGAAGCTTCTTTGGGAGAACTTTATTTTTAATCATTCTATTGGAACATATGGTGAAATAGAAGAATCTTCCAAAAGAAAAAAAAGACTCTTATTATAATTTTTTAATGCTACAACTAATACGGTTTTGACATGGTGTAAATGGCTCTTTTTACTCCACTACTATAGGCTTTTCTACTCTCCCTTCCAATTGTAATCTCCATATCGGCACATTCCCCTTTTGTAATTTCATAGCATCAATGAAATTGTTTCGCTTCCGTGCAAGGCAAAGGTTGGGACGCTTGCTTATTCATTTGTTATTTTCCCTGGTCGTAATAGGTCATGGAAGCAGCTCAAGCGTCGACCGCATTGTCGGGAAGCTTCCGTGGAGGACATCCATCGCAGAATGTGAACCATGTTGCACATCTCTCCGGGGCGCTGGTTGGTGTCCTTCTGGTATGGCTTCTTAGTAGAATTCCTTCTCAATCTCTTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGATTCCAATAGGCCATTCCACTTTGAAATTGAAATGTATTTCAGTTGTATAATATGTGTTCTTTGTTTGTATCTTCTCTAAAAATTTTCTGCTACAGTTTTGATTATAGGCTGTGAATGTGAATCATTACAATTTCTCTTAAACATTAGATATCAACCGTTACAATTTCTCAAAAA

mRNA sequence

GATTTGTCCAATTGGCTTATCGCTCTCAAATTCCCAATGCAGTTTCAGTTGCAGCAGCTGCAGCTTCATGGAGGCCGAATTTCGAAACCTCCAACACTAAGCAACAACCAAATGCCTTTAACTTCCATTTCTCTTCAATCCAGCTTCACCTTAACCTCACTCAGATTTCCCTCTCCATTCTTCCATTCCCTTCCCCAATTTACCCATGTTCTTCCTCTCCACTCGCGTTCCTTTTGTATGAAACCCATCGCGACCTGCAAGATGAACGATGCAGATTTGATATCACAGTTGGAGCTTGGAAAACCACTGCAGAATCGGAAAACGGAGAAGCGTGTTAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACATTTTTCAGGTTCGTAATATAGGAGCTTTGTACCTGTATCACAATCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCACGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGGAAACTTGTTGAAGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACGTTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTTGGTTTGTTTACCATAAGTGTTCTTGTAAAGATGTCATGGGATTGGAGGAAGATACTTGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTCATGGAAGCAGCTCAAGCGTCGACCGCATTGTCGGGAAGCTTCCGTGGAGGACATCCATCGCAGAATGTGAACCATGTTGCACATCTCTCCGGGGCGCTGGTTGGTGTCCTTCTGGTATGGCTTCTTAGTAGAATTCCTTCTCAATCTCTTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGATTCCAATAGGCCATTCCACTTTGAAATTGAAATGTATTTCAGTTGTATAATATGTGTTCTTTGTTTGTATCTTCTCTAAAAATTTTCTGCTACAGTTTTGATTATAGGCTGTGAATGTGAATCATTACAATTTCTCTTAAACATTAGATATCAACCGTTACAATTTCTCAAAAA

Coding sequence (CDS)

ATGCAGTTTCAGTTGCAGCAGCTGCAGCTTCATGGAGGCCGAATTTCGAAACCTCCAACACTAAGCAACAACCAAATGCCTTTAACTTCCATTTCTCTTCAATCCAGCTTCACCTTAACCTCACTCAGATTTCCCTCTCCATTCTTCCATTCCCTTCCCCAATTTACCCATGTTCTTCCTCTCCACTCGCGTTCCTTTTGTATGAAACCCATCGCGACCTGCAAGATGAACGATGCAGATTTGATATCACAGTTGGAGCTTGGAAAACCACTGCAGAATCGGAAAACGGAGAAGCGTGTTAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACATTTTTCAGGTTCGTAATATAGGAGCTTTGTACCTGTATCACAATCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCACGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGGAAACTTGTTGAAGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACGTTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTTGGTTTGTTTACCATAAGTGTTCTTGTAAAGATGTCATGGGATTGGAGGAAGATACTTGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTCATGGAAGCAGCTCAAGCGTCGACCGCATTGTCGGGAAGCTTCCGTGGAGGACATCCATCGCAGAATGTGAACCATGTTGCACATCTCTCCGGGGCGCTGGTTGGTGTCCTTCTGGTATGGCTTCTTAGTAGAATTCCTTCTCAATCTCTTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGA

Protein sequence

MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR

Homology

[Close]

BLAST of IVF0012893 vs. ExPASy Swiss-Prot
Match: Q84MB5 (Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11 PE=1 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.5e-100
Identity = 187/265 (70.57%), Postives = 210/265 (79.25%), Query Frame = 0


Query: 36  SFTLTSLRFPSPFFH-----SLPQFTHVLPLHSRSFCM-KPIATCKMNDADLISQLELGK 95
           S   +SLRF  P  H     S P  +   PL  R   + +   TC+ + +D+  Q EL K
Sbjct: 11  SLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQITCRFSQSDITPQFELDK 70

Query: 96  PLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTATFCHAN 155
              NRK +KR NGIFWIIL+N+GIY+ADH FQVR I +LYLYHN PAWYQF TATFCHAN
Sbjct: 71  AKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVTATFCHAN 130

Query: 156 WNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVGASGAVF 215
           WNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNAVSVGASGAVF
Sbjct: 131 WNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVGASGAVF 190

Query: 216 GLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAH 275
           GLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG+  GG+  Q VNH+AH
Sbjct: 191 GLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQTVNHIAH 250

Query: 276 LSGALVGVLLVWLLSRIPSQSLDQD 295
           LSGALVGV+LVWLLS+ PS S+DQD
Sbjct: 251 LSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of IVF0012893 vs. ExPASy Swiss-Prot
Match: Q9LYP1 (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07
Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 138 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPR 197
           ++  T  + HA   HL +N+  L   G  +E++ G   + + Y+L+G+G +V+S L + R
Sbjct: 135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFI-R 194

Query: 198 NAVSVGASGAVFGLFTISVLVKMSWDW----RKILEVLILGQFVIEKVMEAAQASTALSG 257
           N++SVGASGA+FGL   S+L ++  +W     KI  +L L  FVI            L  
Sbjct: 195 NSISVGASGALFGLLG-SMLSELFTNWTIYSNKIAALLTL-LFVI------------LIN 254

Query: 258 SFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIP 288
              G  P  +V++ AH+ G + G LL ++L   P
Sbjct: 255 LAIGILP--HVDNFAHVGGFVTGFLLGFILLARP 271

[Close]

BLAST of IVF0012893 vs. ExPASy Swiss-Prot
Match: P96617 (Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=ydcA PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-06
Identity = 40/146 (27.40%), Postives = 69/146 (47.26%), Query Frame = 0


Query: 137 WYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILP 196
           W++  T    HA + HL  N   +++F   +E   G     L Y  +G+  N+ +++  P
Sbjct: 58  WWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGTYVTEP 117

Query: 197 RNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR 256
            + V VGASGA+FGLF + + +           VL   + + ++   +    T L+ +  
Sbjct: 118 LDYVHVGASGAIFGLFGVYLFM-----------VLFRNELIGQE--HSKMIITLLAFAVL 177

Query: 257 GGHPSQNVNHVAHLSGALVGVLLVWL 283
               + N+N +AHL G   G LL +L
Sbjct: 178 MSFINSNINMMAHLFGLCGGFLLSFL 190

[Close]

BLAST of IVF0012893 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.0e-05
Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 122 VRNIGAL---YLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 181
           +  +GAL    + H    W + FT  + HA   H+ +N+  L   G  +E+E G   + L
Sbjct: 112 LEKMGALDVSMVVHKHEVW-RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGL 171

Query: 182 SYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDW 225
            Y+++G G +++S L   R  +SVGASGA+FGL   ++L ++  +W
Sbjct: 172 LYMISGFGGSLLSSL-FNRAGISVGASGALFGLLG-AMLSELLTNW 214

[Close]

BLAST of IVF0012893 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.9e-05
Identity = 30/93 (32.26%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 132 HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVS 191
           H    W +  +  + HA   HL +N+  L   G  +E++ G   + L Y+++G+G +++S
Sbjct: 106 HEHQGW-RLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILS 165

Query: 192 WLILPRNAVSVGASGAVFGLFTISVLVKMSWDW 225
            L L + ++SVGASGA+FGL   ++L ++  +W
Sbjct: 166 SLFL-QESISVGASGALFGLLG-AMLSELLTNW 195

[Close]

BLAST of IVF0012893 vs. ExPASy TrEMBL
Match: A0A5D3E659 (Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006290 PE=3 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.0e-169
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60
           MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60

Query: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120
           LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF
Sbjct: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120

Query: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180
           QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180

Query: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240
           ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK
Sbjct: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240

Query: 241 VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR 300
           VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR
Sbjct: 241 VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR 300

Query: 301 KGR 304
           KGR
Sbjct: 301 KGR 303

[Close]

BLAST of IVF0012893 vs. ExPASy TrEMBL
Match: A0A1S3CQS6 (rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503716 PE=3 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.0e-169
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60
           MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60

Query: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120
           LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF
Sbjct: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120

Query: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180
           QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180

Query: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240
           ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK
Sbjct: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240

Query: 241 VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR 300
           VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR
Sbjct: 241 VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR 300

Query: 301 KGR 304
           KGR
Sbjct: 301 KGR 303

[Close]

BLAST of IVF0012893 vs. ExPASy TrEMBL
Match: A0A5A7TAW2 (Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002620 PE=3 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 5.0e-168
Identity = 303/304 (99.67%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60
           MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60

Query: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120
           LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF
Sbjct: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120

Query: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180
           QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180

Query: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240
           ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK
Sbjct: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240

Query: 241 -VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALH 300
            VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALH
Sbjct: 241 VVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALH 300

Query: 301 RKGR 304
           RKGR
Sbjct: 301 RKGR 304

[Close]

BLAST of IVF0012893 vs. ExPASy TrEMBL
Match: A0A0A0LEK4 (Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889110 PE=3 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 6.2e-158
Identity = 286/303 (94.39%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60
           MQ QLQQ  LHGGRISKPPTL NNQMPLTSIS QSSFTLTSLRF SPF HSLPQFTHVLP
Sbjct: 1   MQLQLQQQLLHGGRISKPPTLCNNQMPLTSISFQSSFTLTSLRFSSPFLHSLPQFTHVLP 60

Query: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120
           LHSR FCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+F
Sbjct: 61  LHSRFFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVF 120

Query: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180
           QVRNIGALYLYH+RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 121 QVRNIGALYLYHSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180

Query: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240
           ILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK
Sbjct: 181 ILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240

Query: 241 VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR 300
           VMEAAQASTALSGSFR G+  QNVNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHR
Sbjct: 241 VMEAAQASTALSGSFR-GYSLQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHR 300

Query: 301 KGR 304
           KGR
Sbjct: 301 KGR 302

[Close]

BLAST of IVF0012893 vs. ExPASy TrEMBL
Match: A0A6J1J179 (rhomboid-like protein 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480404 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.8e-133
Identity = 257/309 (83.17%), Postives = 269/309 (87.06%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60
           MQ +LQ  QLHG RI KP  L   QM  TSI+  S F+ +SLRF SP FH      S+ Q
Sbjct: 1   MQSRLQ--QLHGSRILKPRGL-REQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQ 60

Query: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120
           F++VL L +RS   KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120

Query: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIFQVR+IG LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300
           QFVIEKVMEAAQASTALSGSFRGG   QNVNHVAHLSGALVGV+LVWLLSRIPSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300

Query: 301 ASALHRKGR 304
           AS LHRK R
Sbjct: 301 ASTLHRKVR 306

[Close]

BLAST of IVF0012893 vs. NCBI nr
Match: XP_008466245.1 (PREDICTED: rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis melo] >TYK31329.1 rhomboid-like protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 604 bits (1558), Expect = 5.75e-218
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60
           MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60

Query: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120
           LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF
Sbjct: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120

Query: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180
           QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180

Query: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240
           ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK
Sbjct: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240

Query: 241 VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR 300
           VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR
Sbjct: 241 VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR 300

Query: 301 KGR 303
           KGR
Sbjct: 301 KGR 303

[Close]

BLAST of IVF0012893 vs. NCBI nr
Match: KAA0038717.1 (rhomboid-like protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 600 bits (1546), Expect = 4.03e-216
Identity = 303/304 (99.67%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60
           MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60

Query: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120
           LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF
Sbjct: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120

Query: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180
           QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180

Query: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240
           ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK
Sbjct: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240

Query: 241 V-MEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALH 300
           V MEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALH
Sbjct: 241 VVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALH 300

Query: 301 RKGR 303
           RKGR
Sbjct: 301 RKGR 304

[Close]

BLAST of IVF0012893 vs. NCBI nr
Match: XP_011652547.1 (rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 566 bits (1459), Expect = 6.83e-203
Identity = 286/303 (94.39%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFHSLPQFTHVLP 60
           MQ QLQQ  LHGGRISKPPTL NNQMPLTSIS QSSFTLTSLRF SPF HSLPQFTHVLP
Sbjct: 1   MQLQLQQQLLHGGRISKPPTLCNNQMPLTSISFQSSFTLTSLRFSSPFLHSLPQFTHVLP 60

Query: 61  LHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIF 120
           LHSR FCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+F
Sbjct: 61  LHSRFFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVF 120

Query: 121 QVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180
           QVRNIGALYLYH+RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 121 QVRNIGALYLYHSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 180

Query: 181 ILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240
           ILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK
Sbjct: 181 ILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 240

Query: 241 VMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHR 300
           VMEAAQASTALSGSFR G+  QNVNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHR
Sbjct: 241 VMEAAQASTALSGSFR-GYSLQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHR 300

Query: 301 KGR 303
           KGR
Sbjct: 301 KGR 302

[Close]

BLAST of IVF0012893 vs. NCBI nr
Match: XP_038896989.1 (rhomboid-like protein 11, chloroplastic [Benincasa hispida])

HSP 1 Score: 510 bits (1313), Expect = 1.35e-180
Identity = 266/308 (86.36%), Postives = 275/308 (89.29%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60
           MQ QLQQL  HG RISKP +L   QMP+TSISL SSFTLTS   PSP FH      SLP+
Sbjct: 1   MQLQLQQL--HGCRISKPHSLCK-QMPMTSISLLSSFTLTSFSLPSPLFHPFSSSHSLPR 60

Query: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120
           F+ VL L +RS C KPIA CKMNDADLISQLELGKPLQNRK E+RVNGIFWIILLNIGIY
Sbjct: 61  FSDVLRLRTRSVCAKPIAMCKMNDADLISQLELGKPLQNRKPERRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIFQVR+IG LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKL+EEEEGNF
Sbjct: 121 VADHIFQVRSIGVLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLLEEEEGNF 180

Query: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300
           QFVIEKVMEAAQASTALSGSFRGGH  QNVNHVAHLSGALVGVLLVWLLSRIPS S DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSPSHDQD 300

Query: 301 ASALHRKG 302
           AS LH KG
Sbjct: 301 ASTLHTKG 305

[Close]

BLAST of IVF0012893 vs. NCBI nr
Match: XP_023524317.1 (rhomboid-like protein 11, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 489 bits (1259), Expect = 2.34e-172
Identity = 259/309 (83.82%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60
           MQ +LQQL  HG RI KP  L   QM  TSI+  SSF+ +SLRF SP FH      S+ Q
Sbjct: 1   MQSRLQQL--HGSRILKPRGL-REQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQ 60

Query: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120
           F++VL L +RS   KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120

Query: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIFQVR+IGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300
           QFVIEKVMEAAQASTALSGSFRGG   QNVNHVAHLSGALVGV+LVWLLSRIPSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300

Query: 301 ASALHRKGR 303
           AS LHRK R
Sbjct: 301 ASTLHRKVR 306

[Close]

BLAST of IVF0012893 vs. TAIR 10
Match: AT5G25752.1 (rhomboid-like protein 11 )

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-101
Identity = 187/265 (70.57%), Postives = 210/265 (79.25%), Query Frame = 0


Query: 36  SFTLTSLRFPSPFFH-----SLPQFTHVLPLHSRSFCM-KPIATCKMNDADLISQLELGK 95
           S   +SLRF  P  H     S P  +   PL  R   + +   TC+ + +D+  Q EL K
Sbjct: 11  SLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQITCRFSQSDITPQFELDK 70

Query: 96  PLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTATFCHAN 155
              NRK +KR NGIFWIIL+N+GIY+ADH FQVR I +LYLYHN PAWYQF TATFCHAN
Sbjct: 71  AKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVTATFCHAN 130

Query: 156 WNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVGASGAVF 215
           WNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNAVSVGASGAVF
Sbjct: 131 WNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVGASGAVF 190

Query: 216 GLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAH 275
           GLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG+  GG+  Q VNH+AH
Sbjct: 191 GLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQTVNHIAH 250

Query: 276 LSGALVGVLLVWLLSRIPSQSLDQD 295
           LSGALVGV+LVWLLS+ PS S+DQD
Sbjct: 251 LSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of IVF0012893 vs. TAIR 10
Match: AT5G25640.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.2e-26
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 160 LYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVK 219
           L++ GK+VEEE+GNF LWLSY+ TGVGAN+VSW  LP N+   GASGAVFGLF ISVLVK
Sbjct: 5   LWLTGKIVEEEKGNFGLWLSYLFTGVGANMVSWFTLPPNSFFSGASGAVFGLFVISVLVK 64

Query: 220 MSWDWRKILEVLILGQFVIEKVMEA 245
           MS  W K LEVLILGQFV+++ +++
Sbjct: 65  MSRGWSKFLEVLILGQFVMKRFIDS 89

[Close]

BLAST of IVF0012893 vs. TAIR 10
Match: AT5G07250.1 (RHOMBOID-like protein 3 )

HSP 1 Score: 55.8 bits (133), Expect = 6.8e-08
Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 138 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPR 197
           ++  T  + HA   HL +N+  L   G  +E++ G   + + Y+L+G+G +V+S L + R
Sbjct: 135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFI-R 194

Query: 198 NAVSVGASGAVFGLFTISVLVKMSWDW----RKILEVLILGQFVIEKVMEAAQASTALSG 257
           N++SVGASGA+FGL   S+L ++  +W     KI  +L L  FVI            L  
Sbjct: 195 NSISVGASGALFGLLG-SMLSELFTNWTIYSNKIAALLTL-LFVI------------LIN 254

Query: 258 SFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIP 288
              G  P  +V++ AH+ G + G LL ++L   P
Sbjct: 255 LAIGILP--HVDNFAHVGGFVTGFLLGFILLARP 271

[Close]

BLAST of IVF0012893 vs. TAIR 10
Match: AT5G07250.2 (RHOMBOID-like protein 3 )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 32/87 (36.78%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 138 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPR 197
           ++  T  + HA   HL +N+  L   G  +E++ G   + + Y+L+G+G +V+S L + R
Sbjct: 135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFI-R 194

Query: 198 NAVSVGASGAVFGLFTISVLVKMSWDW 225
           N++SVGASGA+FGL   S+L ++  +W
Sbjct: 195 NSISVGASGALFGLLG-SMLSELFTNW 219

[Close]

BLAST of IVF0012893 vs. TAIR 10
Match: AT2G29050.1 (RHOMBOID-like 1 )

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 122 VRNIGAL---YLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 181
           +  +GAL    + H    W + FT  + HA   H+ +N+  L   G  +E+E G   + L
Sbjct: 112 LEKMGALDVSMVVHKHEVW-RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGL 171

Query: 182 SYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDW 225
            Y+++G G +++S L   R  +SVGASGA+FGL   ++L ++  +W
Sbjct: 172 LYMISGFGGSLLSSL-FNRAGISVGASGALFGLLG-AMLSELLTNW 214

The following BLAST results are available for this feature:

BLAST of IVF0012893 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MB5	2.5e-100	70.57	Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11...	[more]
Q9LYP1	9.6e-07	33.12	RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1	[more]
P96617	3.6e-06	27.40	Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=y...	[more]
Q0WQX7	4.0e-05	33.02	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]
Q9CAN1	6.9e-05	32.26	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]

BLAST of IVF0012893 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E659	2.0e-169	100.00	Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CQS6	2.0e-169	100.00	rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7TAW2	5.0e-168	99.67	Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LEK4	6.2e-158	94.39	Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889110 PE...	[more]
A0A6J1J179	1.8e-133	83.17	rhomboid-like protein 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480...	[more]

BLAST of IVF0012893 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466245.1	5.75e-218	100.00	PREDICTED: rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis melo] >TY...	[more]
KAA0038717.1	4.03e-216	99.67	rhomboid-like protein 11 [Cucumis melo var. makuwa]	[more]
XP_011652547.1	6.83e-203	94.39	rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis sativus]	[more]
XP_038896989.1	1.35e-180	86.36	rhomboid-like protein 11, chloroplastic [Benincasa hispida]	[more]
XP_023524317.1	2.34e-172	83.82	rhomboid-like protein 11, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0012893 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25752.1	1.8e-101	70.57	rhomboid-like protein 11	[more]
AT5G25640.1	4.2e-26	67.06	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G07250.1	6.8e-08	33.12	RHOMBOID-like protein 3	[more]
AT5G07250.2	1.2e-07	36.78	RHOMBOID-like protein 3	[more]
AT2G29050.1	2.9e-06	33.02	RHOMBOID-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 134..286 e-value: 7.8E-30 score: 103.8
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 95..293 e-value: 1.2E-34 score: 121.6
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 100..287
None	No IPR available	PANTHER	PTHR43066:SF5	RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED	coord: 36..298
None	No IPR available	PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	coord: 36..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012893.1	IVF0012893.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity