IVF0012887 (gene) Melon (IVF77) v1

Overview


Name	IVF0012887
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	SWI/SNF complex subunit SWI3B
Location	chr07: 176041 .. 180895 (-)
RNA-Seq Expression	IVF0012887
Synteny	IVF0012887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGGAGGATTTGAGAGAAGCAGAGCCCAGCCGAGCCCAGTCGAGCCCAGCCCATTTCCATATATTTGGGCTCCTTCTCCCGTCTACTTCTCCGATTTATCGCTTCTCTCCTCGCCTGAGCTCACCTACGATTTATTTTGTTATTCCGATCTACTTACCGGAGCTTCCTTTCTCTATTTCCTTCCCCTGCTTCGGGCACCTTGTTATGGCGGCTAATTCACCGGTCCAAGATCCTCCCACGGATGCTTCTGCTAAACAATCTGCTCCTTCCCCTCCCCCGCTCTTGTGACCCCTCCCCTTAAAATCGAGACTCCTCCCTCCGACTCCGGTCAGACCCCCTCCGCCGTCCCCGCTCCCACCCCTCGCCCCGACGACCTTCCTCAACCCACTTCTCCGGATCCAATTCATCTTCCCAGCTATTCCAGTAAGTACTGCATTCACTGCAACCCGGCAGCTACTTGTTTTTAGATGCTAACTCTTATTCTCTTGTCCAGGATGGTTCTCCTGGAACGGCATTCACGAGTGCGAGGTTCGCTTCCTTCCGGAGTTTTTTGATTCACGGTCGCCCTCTAAAAACCCTAGAGTTTACAAGTACCTTCGAAATTCTATTGTCAAGAATTTTAGGGAATGCCCTTCCAAGAAGATCACCTTTACTGATATCCGAAAGACACTCGTTGCCGATGTAGGATCCATTCGTAGGGTTTTTGATTTTCTCGAGGCGTGGGGTCTTATCAATTACTCGCCCTCCGCGCTGAGCAAACCCTGAAGTGGGAGGACCGGGACTCCAAGTCTAATGCTTCCGCTTCCAACACCGGCGAACCTGGAGGTGGTTCCGCGAATTCGTCGGCGCCTAAAGACGCTTCTAAGAGAGTATGCAGCGGTTGCAAGTCTATTTGTAGCATTGCTTGCTTGCTTGCGATAAGGTTCGCATCTACTTGCATCTTATTAAAGTTTCCTTTACCCGTTTACTTGTTTCCGCGAATTAATTTGTGTTTTGTTCCTCCTCAGCTTATTCTTACTTTGTTGTATTCTCCGTGCTAGACTTGCTAGTTTTCGACTCTGTATAGATAAAAGTTTTTTCTTCAAGTGGCGATGATATTGAGTTTATATACATACATACATACATACATAATATATATATGGATAGATAGATAGTTTGGGGTAGTTTACGAGTGTCCCGAGGCAGCGGTGGTTTATTTGTTTAATTAGTTTTCAATATCAACCTTCAATTATTTTCATTCCCACGTTGTATTATAGAAAGCCATGTAGGTATAGATTTTGTGGTCTTTAATCTGTCAAAAACCTTCAGAGTAGGGTTGTTAATTGTTATCTATTCATTTTCTTAATCTTCCTGCTCAAATTTAATGACGACGTTTGCCGACATATACTGGTTTAGTGGATAGGTGTCTAATTGGTTTTGGTGACTGGATGAATTTGGAACTTGTAGAGGTTTGAATTTTTTAAGTGGATATTAAATGAATCGATATGATTTAATGAATTAGAACTAATATAATGGTCATTATTTCGTACAGTTTGATTTGACACTTTGTGCAAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTGTTAGTTCTTCAGATTTTAGACGTGTTGAGATCAATGATGATACACGAACAGATTGGACCGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGACGCATTATGGTGATGACTGGAAAAAGGTTGCACAACATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTTTAGGGGAGCAGTTTCATGGTTATCCAGATTCTGAACATATTGACAACAATTATACTGTGGTGAAGGATCATGCCAGTGCCAATCTTACGTTGGAAAGTACTGGCGCATCTATTCCTAATAAAAGAATCCGTCTATCACCTCTGGCAGATGCAAGCAATCCCATAATGGCTCAGGTTACTGTTGGTTTTTGTCCTTTCCTTTTAGCTTGCATTAGCTGCTTGCCTGTTAGTAATTCAACCAACACCTTGTGTTATCGAAGTCCTATTCACATGCAAAAAGAAGTGTGTATTAGAGGTCTGATTTGCACGAGTAGTGGAAAAAGTGAAACAACGTGTATCAATTTGATGCCTTCTACTAGATTTCTTTTTCTTTTATAGGGATTTTTAACATTTTGTAGGTGGGATTGGGTTATTAATCAATGGGAGACTAATAAAGGCTTATTCATTTTAGCTTTCGGTGAATAAATTTGACTCCTCTCGGAGAAGGGGAAACAGAAAGAAAGGAAAACAATGGATTTTGTTAGTTTGTCCTGACTGGAACCAATTTCTTCCTTTTTTCTAAAAGAAAAGTCAAATTAATTACCCAAGTTATTCGAATCATGAATTAACGTGGACAAGCTATAATCCAAGTTAACCCAACTACAGGTTTCCAATACTTGGACTTTTACTAGCGTACTATTCTTCTTCATTGCATATAGGTTCTTTGGATTGAAATTTTTAGGCCCGATTTGTAATAATAAACTCATTATGTTCCTCAGTTTTCAACCTAGTCCTCTTTCCTCTGTTTTCACGCTTCATGATCCAATTTTATTCCGCCCTCGATTCATCACTCTCCACTAATTCTGATTGCATTCCAACCTCCCAAACAGCCCCAATATAGCTATCTTTTGTAGACCGTAGTAATTTTCCAAGAATATCTATGGTACCTGGCTAAAACTGATAGTGGACCTACTGGTCGTTTAAAACTGTCTGGTTTTTATTCTCTATATGGATAGAGAGATAATTATGTGATCGATATTTATGCTCCCAGGCTGCCTTTCTGTCGTCTTTGGTGGGTATTGAGGTTGCAGAAGCAGCTGCCCAGGCAGCTGTGATTAAACTTTCCGAGATGGACTTTGGAAGAGATGGGGAAATTGCCAGACCTATCGCTAGGAATACAGAAGAGCAAGGTATTAGCTTTTTTCTGCTGAAGGATTTTTATTTTTATTATTTTCATGGTTATTTTATTTTCTATAATAATCATTCATAGGTTGTTGAAGTTGAATATGCGTGTGTGTATTTTGTTTGCATTTGAAGCTTACCCGATCATCTTATGGAGAAAAAAAAAGTGTGCATCTTCTTTTTCTTGTTTTCTGATCCACTGCTTTTATTTTTGTTGATTATAAGTTATACTTGTGTCAGAAAGGAAAAACTCAGGGTCAAGTTGATGCTAATCATTTTGTTTTCAATGTCTTCTCTACATCATGTTTACTAACTACATCTTCGTTTTGTAATTTGTATTATAATTTGAGTTCAACAAATGTGGGGATCGGGAATCGGGAATCAAATTGCGGATCTCAAGCGAACGATTTATTGTTTAAACTGCTGATCTAATTCACGTTAGAAATATGTAAATGCTTAGTGAATATGTTTTGAAATTTTGGTAAGATTTTAATATTTTTCTTTTGAAATTTTGGTAGGATTTTAATATTTTTCTTTCTTCCTCTTTTACTTATTACACCTAATAAATATACCAAAACCCAGAAAAGGCAGACAAGAATCCACTCGGTTTAAGTTGGTTAGAAAGGGTAATAGTCGCAGAAAGATTTTCGAAGGGTATACCTAGGAGAGATTTAAGTTTAGCCAAACAAAACATCGATTCAATGTTTTTTCTTGCTAACTAGACACCCTAAGCTTTAACCACTGAAGTCTACCTTCCTTAAAAGTTCTATGGTCTTCTCCCAACCGTGCTCCTTGAGTAATATCTTTAACCATATGTGATACGAGCATCTTTGTTTTGTCTCTGAACTTAGGTTCTCATAATAGTTGTTTGCTAGGGTTTAATTATCATGATCCTCGATGGTAACCATTTAGTTTTTTTGTTTTTGGTTTTTGAAAATTAAGCCTATAAATACAACTAAATTTCTTTTTTTGTTATCTAGGAATTTGATCAAGAATTCGAACTCTTGGACTAAGATAGATGTAAATCATTGTGAAATGTTAAGAGAAAATCAACTTAATTTTCAAAAATAAAAAATCAAATAGTTAACAAACGGGCCTAAGCTTTTCACCCAGAGGCCAAAACTTTGGAGAATCTCTTCCTCATTTGACTTGTACATCACTACGTGTGGGCTTAAGAATAGTAAGCCCCCAATTAGATCGGGTAGATGCATCATAAATCAAAAAAGATCCAAAGGGGGACTGGACTAGTTTCGGAGGTGCTAGACTATCTTGTATGAGGCGGAAGTCGAACAGATCTAGAGTAAATGATCGTCCCTACCTATTTTTTTATTTTTATTTTACTCTAAACTTGAGTACCCTAAATAGGTCTTAAGTTTCTTAAGACCATTAATTGAAGTCCATTGGTGCAAAAAACACAAGACCTTCGTGTTTATAATTCAGAAATCCACAGAGAAAAAATACTAGGGTTTCACGCACCATTTAAGAGGAATAGTAGAGGCTTTCGCATTTCTGAAATGTTCCCTATTTGCAATTTTTCATTATTCCTTCCAAAGTTAAAGGGATGAATAATTTTGATTTTTCCTACCTTTCCCTTTCATAGTAGTTTTAGTTTCTTAAGGAGCATATGCTGAGAAATAACAGAACCTAATTTCACGCATCTGCTAGATATGACTATATTATAGGTTTTCCTCCCGATGTTAATTGTTAATGAGATAGTATGGAAATGTCATGACTCTTGGTGGTTGTGATTCAGGAAACGACGTTGCATCCTGTGAAGGCAGCTTGTTAAGGGGGTCTTCGATGGATATGGAGAAAGCAATATCTCATATTGTAGACGTTCAGGTGAGGGCTTGGTATTCTGGGATAGTCGTAGGTTGAGAAGTTTGCGTTATTTAATTTCCAACAATTGTACTTATT

mRNA sequence

ATGGAAGTGGAGGATTTGAGAGAAGCAGAGCCCAGCCGAGCCCAGTCGAGCCCAGCCCATTTCCATATATTTGGGCTCCTTCTCCCGTCTACTTCTCCGATTTATCGCTTCTCTCCTCGCCTGAGCTCACCTACGATTTATTTTGTTATTCCGATCTACTTACCGGAGCTTCCTTTCTCTATTTCCTTCCCCTGCTTCGGGCACCTTGTTATGGCGGCTAATTCACCGGTCCAAGATCCTCCCACGGATGCTTCTGCTAAACAATCTGCTCCTTCCCCTCCCCCACTCCTCCCTCCGACTCCGGTCAGACCCCCTCCGCCGTCCCCGCTCCCACCCCTCGCCCCGACGACCTTCCTCAACCCACTTCTCCGGATCCAATTCATCTTCCCAGCTATTCCAGTAAGATGGTTCTCCTGGAACGGCATTCACGAGTGCGAGGTTCGCTTCCTTCCGGAGTTTTTTGATTCACGGTCGCCCTCTAAAAACCCTAGAGTTTACAAGTACCTTCGAAATTCTATTGTCAAGAATTTTAGGGAATGCCCTTCCAAGAAGATCACCTTTACTGATATCCGAAAGACACTCGTTGCCGATGTAGGATCCATTCGTAGGCAAACCCTGAAGTGGGAGGACCGGGACTCCAAGTCTAATGCTTCCGCTTCCAACACCGGCGAACCTGGAGGTGGTTCCGCGAATTCGTCGGCGCCTAAAGACGCTTCTAAGAGAGTATGCAGCGGTTGCAAGTCTATTTGTAGCATTGCTTGCTTGCTTGCGATAAGGTTCGCATCTACTTGCATCTTATTAAAGTTTCCTTTACCCTTTGATTTGACACTTTGTGCAAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTGTTAGTTCTTCAGATTTTAGACGTGTTGAGATCAATGATGATACACGAACAGATTGGACCGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGACGCATTATGGTGATGACTGGAAAAAGGTTGCACAACATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTTTAGGGGAGCAGTTTCATGGTTATCCAGATTCTGAACATATTGACAACAATTATACTGTGGTGAAGGATCATGCCAGTGCCAATCTTACGTTGGAAAGTACTGGCGCATCTATTCCTAATAAAAGAATCCGTCTATCACCTCTGGCAGATGCAAGCAATCCCATAATGGCTCAGGCTGCCTTTCTGTCGTCTTTGGTGGGTATTGAGGTTGCAGAAGCAGCTGCCCAGGCAGCTGTGATTAAACTTTCCGAGATGGACTTTGGAAGAGATGGGGAAATTGCCAGACCTATCGCTAGGAATACAGAAGAGCAAGGAAACGACGTTGCATCCTGTGAAGGCAGCTTGTTAAGGGGGTCTTCGATGGATATGGAGAAAGCAATATCTCATATTGTAGACGTTCAGGTGAGGGCTTGGTATTCTGGGATAGTCGTAGGTTGAGAAGTTTGCGTTATTTAATTTCCAACAATTGTACTTATT

Coding sequence (CDS)

ATGGAAGTGGAGGATTTGAGAGAAGCAGAGCCCAGCCGAGCCCAGTCGAGCCCAGCCCATTTCCATATATTTGGGCTCCTTCTCCCGTCTACTTCTCCGATTTATCGCTTCTCTCCTCGCCTGAGCTCACCTACGATTTATTTTGTTATTCCGATCTACTTACCGGAGCTTCCTTTCTCTATTTCCTTCCCCTGCTTCGGGCACCTTGTTATGGCGGCTAATTCACCGGTCCAAGATCCTCCCACGGATGCTTCTGCTAAACAATCTGCTCCTTCCCCTCCCCCACTCCTCCCTCCGACTCCGGTCAGACCCCCTCCGCCGTCCCCGCTCCCACCCCTCGCCCCGACGACCTTCCTCAACCCACTTCTCCGGATCCAATTCATCTTCCCAGCTATTCCAGTAAGATGGTTCTCCTGGAACGGCATTCACGAGTGCGAGGTTCGCTTCCTTCCGGAGTTTTTTGATTCACGGTCGCCCTCTAAAAACCCTAGAGTTTACAAGTACCTTCGAAATTCTATTGTCAAGAATTTTAGGGAATGCCCTTCCAAGAAGATCACCTTTACTGATATCCGAAAGACACTCGTTGCCGATGTAGGATCCATTCGTAGGCAAACCCTGAAGTGGGAGGACCGGGACTCCAAGTCTAATGCTTCCGCTTCCAACACCGGCGAACCTGGAGGTGGTTCCGCGAATTCGTCGGCGCCTAAAGACGCTTCTAAGAGAGTATGCAGCGGTTGCAAGTCTATTTGTAGCATTGCTTGCTTGCTTGCGATAAGGTTCGCATCTACTTGCATCTTATTAAAGTTTCCTTTACCCTTTGATTTGACACTTTGTGCAAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTGTTAGTTCTTCAGATTTTAGACGTGTTGAGATCAATGATGATACACGAACAGATTGGACCGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGACGCATTATGGTGATGACTGGAAAAAGGTTGCACAACATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTTTAGGGGAGCAGTTTCATGGTTATCCAGATTCTGAACATATTGACAACAATTATACTGTGGTGAAGGATCATGCCAGTGCCAATCTTACGTTGGAAAGTACTGGCGCATCTATTCCTAATAAAAGAATCCGTCTATCACCTCTGGCAGATGCAAGCAATCCCATAATGGCTCAGGCTGCCTTTCTGTCGTCTTTGGTGGGTATTGAGGTTGCAGAAGCAGCTGCCCAGGCAGCTGTGATTAAACTTTCCGAGATGGACTTTGGAAGAGATGGGGAAATTGCCAGACCTATCGCTAGGAATACAGAAGAGCAAGGAAACGACGTTGCATCCTGTGAAGGCAGCTTGTTAAGGGGGTCTTCGATGGATATGGAGAAAGCAATATCTCATATTGTAGACGTTCAGGTGAGGGCTTGGTATTCTGGGATAGTCGTAGGTTGA

Protein sequence

MEVEDLREAEPSRAQSSPAHFHIFGLLLPSTSPIYRFSPRLSSPTIYFVIPIYLPELPFSISFPCFGHLVMAANSPVQDPPTDASAKQSAPSPPPLLPPTPVRPPPPSPLPPLAPTTFLNPLLRIQFIFPAIPVRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRRQTLKWEDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKFPLPFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVASCEGSLLRGSSMDMEKAISHIVDVQVRAWYSGIVVG

Homology

[Close]

BLAST of IVF0012887 vs. ExPASy Swiss-Prot
Match: Q84JG2 (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana OX=3702 GN=SWI3B PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.3e-82
Identity = 180/384 (46.88%), Postives = 239/384 (62.24%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WFSW  I++CEVR LPEFFDSRS SKNP+ Y YLRNSI+K +R+   +KI+FTD+R+TLV
Sbjct: 56  WFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLV 115

Query: 196 ADVGSIRR-------------------QTLKWEDRDSKSNASASNTGEPGGGSANSSAP- 255
           +DV SIRR                   + LKWE++++         G+  G +A+  A  
Sbjct: 116 SDVVSIRRVFDFLDSWGLINYNSSASAKPLKWEEKEA---------GKSAGDAASEPATT 175

Query: 256 -KDASKRVCSGCKSICSIACLLAIRFASTCILLKFPLPFDLTLCARCYVRGNYRVGVVSS 315
            K+ +KR C+GCK+ICSIAC    +             +DLTLCARCYVR NYRVG ++S
Sbjct: 176 VKETAKRNCNGCKAICSIACFACDK-------------YDLTLCARCYVRSNYRVG-INS 235

Query: 316 SDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPLG 375
           S+F+RVEI+++++ +W+DKE L LLEA+ HYGDDWKKVA HV GRTE++CV+ FVKLP G
Sbjct: 236 SEFKRVEISEESKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFG 295

Query: 376 EQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAAFL 435
           EQF    DSE     +  +KD             S PNKRI+L+PLADASNPIMAQAAFL
Sbjct: 296 EQFVKESDSEDGLEMFDQIKDSDIPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFL 355

Query: 436 SSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIAR----------NTEEQGNDVASCE 489
           S+L G  VAEAAA+AAV  LS++D+  D   +R   R           T  +     +  
Sbjct: 356 SALAGTNVAEAAARAAVRALSDVDYEADKNASRDPNRQDANAASSGETTRNESERAWADA 415

[Close]

BLAST of IVF0012887 vs. ExPASy Swiss-Prot
Match: Q8TAQ2 (SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=SMARCC2 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.2e-23
Identity = 100/362 (27.62%), Postives = 165/362 (45.58%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WF +N +H  E R LPEFF+ ++ SK P +Y   RN ++  +R  P + +T T  R+ L 
Sbjct: 432 WFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLA 491

Query: 196 ADVGSIRRQTL---KWEDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKS-ICS 255
            DV +I R      +W   + + +A +  T  P G       P  +   V +   S +  
Sbjct: 492 GDVCAIMRVHAFLEQWGLINYQVDAESRPT--PMG------PPPTSHFHVLADTPSGLVP 551

Query: 256 IACLLAIRFASTCILLKFP-----LPFDLT---LCARCYVRGNYRVGVVSSSDFRRVEIN 315
           +      + +++  +L FP      P D+    L    Y + N      +++   R    
Sbjct: 552 LQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATR---- 611

Query: 316 DDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDS 375
                +WT++ETL LLEAL  Y DDW KV++HVG RT+ EC+ HF++LP+ + +      
Sbjct: 612 -----EWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPY------ 671

Query: 376 EHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVA 435
                              LE + AS+     +  P + + NP+M+  AFL+S+V   VA
Sbjct: 672 -------------------LEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 731

Query: 436 EAAAQAAVIKLSEMDFGRDGEIARPIARNTEE------QGNDVASCEGSLLRGSSMDMEK 480
            AAA++A+ + S+M       +     R  EE      + +     E S + G++ D  +
Sbjct: 732 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 751

[Close]

BLAST of IVF0012887 vs. ExPASy Swiss-Prot
Match: P97496 (SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 5.4e-23
Identity = 89/307 (28.99%), Postives = 138/307 (44.95%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WF +N IH  E R LPEFF+ ++ SK P +Y   RN ++  +R  P + +T T  R+ L 
Sbjct: 456 WFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLT 515

Query: 196 ADVGSIRRQTLKWEDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACL 255
            DV ++ R     E          +   +P         P      V +   S      L
Sbjct: 516 GDVCAVMRVHAFLEQW-----GLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHL 575

Query: 256 LAIRFASTCILLKFP-----LPFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDW 315
            + +  +   +L FP      P DL            R  + S     + +       +W
Sbjct: 576 RSPQVPAAQQMLNFPEKNKEKPIDLQ-------NFGLRTDIYSKKTLAKSK-GASAGREW 635

Query: 316 TDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNY 375
           T++ETL LLEAL  Y DDW KV++HVG RT+ EC+ HF++LP+ + +             
Sbjct: 636 TEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPY------------- 695

Query: 376 TVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAA 435
                       LE++ AS+     +  P + + NP+M+  AFL+S+V   VA AAA+AA
Sbjct: 696 ------------LENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAA 724

Query: 436 VIKLSEM 438
           + + S +
Sbjct: 756 LEEFSRV 724

[Close]

BLAST of IVF0012887 vs. ExPASy Swiss-Prot
Match: Q6PDG5 (SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 5.4e-23
Identity = 100/362 (27.62%), Postives = 165/362 (45.58%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WF +N +H  E R LPEFF+ ++ SK P +Y   RN ++  +R  P + +T T  R+ L 
Sbjct: 432 WFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLA 491

Query: 196 ADVGSIRRQTL---KWEDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKS-ICS 255
            DV +I R      +W   + + +A +  T  P G       P  +   V +   S +  
Sbjct: 492 GDVCAIMRVHAFLEQWGLINYQVDAESRPT--PMG------PPPTSHFHVLADTPSGLVP 551

Query: 256 IACLLAIRFASTCILLKFP-----LPFDLT---LCARCYVRGNYRVGVVSSSDFRRVEIN 315
           +      + +++  +L FP      P D+    L    Y + N      +++   R    
Sbjct: 552 LQPKPPQQSSASQQMLNFPEKGKEKPADMQNFGLRTDMYTKKNVPSKSKAAASATR---- 611

Query: 316 DDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDS 375
                +WT++ETL LLEAL  Y DDW KV++HVG RT+ EC+ HF++LP+ + +      
Sbjct: 612 -----EWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPY------ 671

Query: 376 EHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVA 435
                              LE + AS+     +  P + + NP+M+  AFL+S+V   VA
Sbjct: 672 -------------------LEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 731

Query: 436 EAAAQAAVIKLSEMDFGRDGEIARPIARNTEE------QGNDVASCEGSLLRGSSMDMEK 480
            AAA++A+ + S+M       +     R  EE      + +     E S + G++ D  +
Sbjct: 732 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASDEPE 751

[Close]

BLAST of IVF0012887 vs. ExPASy Swiss-Prot
Match: Q92922 (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3)

HSP 1 Score: 110.2 bits (274), Expect = 7.0e-23
Identity = 89/307 (28.99%), Postives = 138/307 (44.95%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WF +N IH  E R LPEFF+ ++ SK P +Y   RN ++  +R  P + +T T  R+ L 
Sbjct: 457 WFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLT 516

Query: 196 ADVGSIRRQTLKWEDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACL 255
            DV ++ R     E          +   +P         P      V +   S      L
Sbjct: 517 GDVCAVMRVHAFLEQW-----GLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHL 576

Query: 256 LAIRFASTCILLKFP-----LPFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDW 315
            + +  +   +L FP      P DL            R  + S     + +       +W
Sbjct: 577 RSPQVPAAQQMLNFPEKNKEKPVDLQ-------NFGLRTDIYSKKTLAKSK-GASAGREW 636

Query: 316 TDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNY 375
           T++ETL LLEAL  Y DDW KV++HVG RT+ EC+ HF++LP+ + +             
Sbjct: 637 TEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPY------------- 696

Query: 376 TVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAA 435
                       LE++ AS+     +  P + + NP+M+  AFL+S+V   VA AAA+AA
Sbjct: 697 ------------LENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAA 725

Query: 436 VIKLSEM 438
           + + S +
Sbjct: 757 LEEFSRV 725

[Close]

BLAST of IVF0012887 vs. ExPASy TrEMBL
Match: A0A5D3D8W2 (SWI/SNF complex subunit SWI3B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00310 PE=4 SV=1)

HSP 1 Score: 811.6 bits (2095), Expect = 1.8e-231
Identity = 438/517 (84.72%), Postives = 444/517 (85.88%), Query Frame = 0


Query: 1   MEVEDLREAEPSRAQSSPAHFHIFGLLLPSTSPIYRFSPRLSSPTIYFVIPIYLPELPFS 60
           MEVEDLREAEPSRAQSSPAHFHIFGLLLPSTSPIYRFSPRLSSPTIYFVIPIYLPELPFS
Sbjct: 1   MEVEDLREAEPSRAQSSPAHFHIFGLLLPSTSPIYRFSPRLSSPTIYFVIPIYLPELPFS 60

Query: 61  ISFPCFGHLVMAANSPVQDPPTDASAKQSAPSPPPLL--PPTPVRPPP------PS--PL 120
           ISFPCFGHLVMAANSPVQDPPTDASAKQSAPSP P L  PP  +  PP      PS  P 
Sbjct: 61  ISFPCFGHLVMAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPA 120

Query: 121 PPLAPTTFLNPLLRIQFIFPAIPVRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLR 180
           P   P     P        P+   RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLR
Sbjct: 121 PTPRPDDLPQPTSPDPIHLPSYS-RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLR 180

Query: 181 NSIVKNFRECPSKKITFTDIRKTLVADVGSIRR-------------------QTLKWEDR 240
           NSIVKNFRECPSKKITFTDIRKTLVADVGSIRR                   + LKWEDR
Sbjct: 181 NSIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDR 240

Query: 241 DSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKFPL 300
           DSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIAC    +            
Sbjct: 241 DSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDK------------ 300

Query: 301 PFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKK 360
            FDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKK
Sbjct: 301 -FDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKK 360

Query: 361 VAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIP 420
           VAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIP
Sbjct: 361 VAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIP 420

Query: 421 NKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIAR 480
           NKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIAR
Sbjct: 421 NKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIAR 480

Query: 481 NTEEQGNDVASCEGSLLRGSSMDMEKAISHIVDVQVR 489
           NTEEQGNDVASCEGSLLRGSSMDMEKAISHIVDVQ++
Sbjct: 481 NTEEQGNDVASCEGSLLRGSSMDMEKAISHIVDVQMK 503

[Close]

BLAST of IVF0012887 vs. ExPASy TrEMBL
Match: A0A1S3BW08 (SWI/SNF complex subunit SWI3B OS=Cucumis melo OX=3656 GN=LOC103493854 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.7e-189
Identity = 368/447 (82.33%), Postives = 374/447 (83.67%), Query Frame = 0


Query: 71  MAANSPVQDPPTDASAKQSAPSPPPLL--PPTPVRPPP------PS--PLPPLAPTTFLN 130
           MAANSPVQDPPTDASAKQSAPSP P L  PP  +  PP      PS  P P   P     
Sbjct: 1   MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPDDLPQ 60

Query: 131 PLLRIQFIFPAIPVRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFREC 190
           P        P+   RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFREC
Sbjct: 61  PTSPDPIHLPSYS-RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFREC 120

Query: 191 PSKKITFTDIRKTLVADVGSIRR-------------------QTLKWEDRDSKSNASASN 250
           PSKKITFTDIRKTLVADVGSIRR                   + LKWEDRDSKSNASASN
Sbjct: 121 PSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASASN 180

Query: 251 TGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKFPLPFDLTLCARC 310
           TGEPGGGSANSSAPKDASKRVCSGCKSICSIAC    +             FDLTLCARC
Sbjct: 181 TGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDK-------------FDLTLCARC 240

Query: 311 YVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTE 370
           YVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTE
Sbjct: 241 YVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTE 300

Query: 371 RECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLA 430
           RECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLA
Sbjct: 301 RECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLA 360

Query: 431 DASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVA 489
           DASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVA
Sbjct: 361 DASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVA 420

[Close]

BLAST of IVF0012887 vs. ExPASy TrEMBL
Match: A0A0A0L3F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664510 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 5.7e-177
Identity = 379/525 (72.19%), Postives = 401/525 (76.38%), Query Frame = 0


Query: 3   VEDLREAEPSRAQSSPAHFHIFGLLLPSTSPI-YRFSPRLSSPT----IYFVIPIYLPEL 62
           +E LR  E S+AQ SP  F      + + SP+ +     LSSP     ++    +Y PEL
Sbjct: 1   MESLR-FEGSKAQPSPFPF------IWAPSPVCFSDLSLLSSPDLTDGLFCYSDLYSPEL 60

Query: 63  PFSISFPCFGHLVMAANSPVQDPPTDASAKQSAPSPPPLL--PPTPVRPPP------PSP 122
           P SISFP    LVMAANSPVQDPPTDASAKQSAPSP P L  PP  +  PP      PS 
Sbjct: 61  PLSISFP----LVMAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSA 120

Query: 123 LPPLAPTTFLNPLLRIQFIFPA-IP--VRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVY 182
           +P  APT     L +     P  +P   RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVY
Sbjct: 121 VP--APTPRPEDLPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVY 180

Query: 183 KYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRR-------------------QTLK 242
           KYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRR                   + LK
Sbjct: 181 KYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLK 240

Query: 243 WEDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILL 302
           W+DRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIAC    +        
Sbjct: 241 WDDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDK-------- 300

Query: 303 KFPLPFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGD 362
                FDLTLCARCYVRGNYRVG VSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGD
Sbjct: 301 -----FDLTLCARCYVRGNYRVG-VSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGD 360

Query: 363 DWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLEST- 422
           DWKKVAQHVGGRTERECVA FVKLPLGEQFHGYPDSEHIDNN T VKD ASANLTLEST 
Sbjct: 361 DWKKVAQHVGGRTERECVAQFVKLPLGEQFHGYPDSEHIDNNCT-VKDEASANLTLESTG 420

Query: 423 --GASIPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGE 482
             G SIPNKRIRLSPLADASNPIMAQAAFLSSLVG+EVAEAAAQAAVIKLSEMDFG DGE
Sbjct: 421 KIGTSIPNKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGE 480

Query: 483 IARPIARNTEEQGNDVASCEGSLL-RGSSMDMEKAISHIVDVQVR 489
           IA P+ARN  EQGND AS  GS L RGS+MDMEKAISHIV+VQ++
Sbjct: 481 IAIPVARNIGEQGNDAASHGGSCLSRGSTMDMEKAISHIVNVQMK 497

[Close]

BLAST of IVF0012887 vs. ExPASy TrEMBL
Match: A0A6J1IDY0 (SWI/SNF complex subunit SWI3B OS=Cucurbita maxima OX=3661 GN=LOC111474552 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 9.8e-153
Identity = 320/462 (69.26%), Postives = 347/462 (75.11%), Query Frame = 0


Query: 71  MAANSPVQDPPTDASAKQSAPSPPPLLPPTPVRPPPPS----PLPPLAPTTFLNPLLRIQ 130
           MAAN PVQDPPTDASAKQ  PSP P L   PV+   PS      P   P +   P    Q
Sbjct: 1   MAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQ 60

Query: 131 FIFPAIPV------RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFREC 190
              P  PV      RWFSWNGIHECEVRFLPEFF+SRSPSKNPRVYKYLRN+IVKNFREC
Sbjct: 61  SASPD-PVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFREC 120

Query: 191 PSKKITFTDIRKTLVADVGSIRR-------------------QTLKWEDRDSKSNASASN 250
           PSKKITFTD+RKTLVADVGSIRR                   + LKWEDRDSKSN+SAS+
Sbjct: 121 PSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASH 180

Query: 251 TGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKFPLPFDLTLCARC 310
           TGEPGG SA+SSAPKDASKRVCSGCKSICSIAC    +             FDLTLCARC
Sbjct: 181 TGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDK-------------FDLTLCARC 240

Query: 311 YVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTE 370
           YVRGNYRVG VSSSDFRRVEIND+TRTDWTDKETLHLLEALTH+GDDWKKVAQHVGGRTE
Sbjct: 241 YVRGNYRVG-VSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTE 300

Query: 371 RECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLA 430
           RECVAHFVKLPLGEQF GYPDS ++    TVVKDHASA+LTLEST   + +KRIRLSPLA
Sbjct: 301 RECVAHFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLEST--PLTSKRIRLSPLA 360

Query: 431 DASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVA 489
           DASNPIMAQAAFLSSLVG+EVAEAAA AAV+KLS+M FG DGEIA  +ARN  +QGNDV 
Sbjct: 361 DASNPIMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVV 420

[Close]

BLAST of IVF0012887 vs. ExPASy TrEMBL
Match: A0A6J1F6D7 (SWI/SNF complex subunit SWI3B OS=Cucurbita moschata OX=3662 GN=LOC111442757 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 6.4e-152
Identity = 316/461 (68.55%), Postives = 346/461 (75.05%), Query Frame = 0


Query: 71  MAANSPVQDPPTDASAKQSAPSPPPLLPPTPVRPPPPSPLPPLAPTTFLNPLLRIQFIFP 130
           MAAN PVQDPPTDASAK   PSP P L   PV+   PS      P     P  R + +  
Sbjct: 1   MAANLPVQDPPTDASAKHPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPAPTPRPEDLPQ 60

Query: 131 AI---PV------RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 190
           +    PV      RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN+IVKNFRECP
Sbjct: 61  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNAIVKNFRECP 120

Query: 191 SKKITFTDIRKTLVADVGSIRR-------------------QTLKWEDRDSKSNASASNT 250
           SKKITFT++RKTLVADVGSIRR                   + LKWEDRDSKSN+SAS+T
Sbjct: 121 SKKITFTEVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRDSKSNSSASHT 180

Query: 251 GEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKFPLPFDLTLCARCY 310
           GEPGG SA+S+APKDASKRVCSGCKSICSIAC    +             FDLTLCARCY
Sbjct: 181 GEPGGSSADSAAPKDASKRVCSGCKSICSIACFACDK-------------FDLTLCARCY 240

Query: 311 VRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTER 370
           VRGNYRVG VSSSDFRRVEIND+TRTDWTDKETLHLLEALTH+GDDWKKVAQHVGGRTER
Sbjct: 241 VRGNYRVG-VSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTER 300

Query: 371 ECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLAD 430
           ECVAHFVKLPLGEQF GYPDS ++    TVVKDHASA+LTLEST   + +KRIRLSPLAD
Sbjct: 301 ECVAHFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLEST--PLTSKRIRLSPLAD 360

Query: 431 ASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVAS 489
           ASNPIMAQAAFLSSLVG+EVAEAAA AAV+KLS+M FG DGEIA  +ARN  +QGNDV S
Sbjct: 361 ASNPIMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVS 420

[Close]

BLAST of IVF0012887 vs. NCBI nr
Match: KAA0064672.1 (SWI/SNF complex subunit SWI3B [Cucumis melo var. makuwa] >TYK19919.1 SWI/SNF complex subunit SWI3B [Cucumis melo var. makuwa])

HSP 1 Score: 813 bits (2100), Expect = 1.84e-293
Identity = 437/519 (84.20%), Postives = 444/519 (85.55%), Query Frame = 0


Query: 1   MEVEDLREAEPSRAQSSPAHFHIFGLLLPSTSPIYRFSPRLSSPTIYFVIPIYLPELPFS 60
           MEVEDLREAEPSRAQSSPAHFHIFGLLLPSTSPIYRFSPRLSSPTIYFVIPIYLPELPFS
Sbjct: 1   MEVEDLREAEPSRAQSSPAHFHIFGLLLPSTSPIYRFSPRLSSPTIYFVIPIYLPELPFS 60

Query: 61  ISFPCFGHLVMAANSPVQDPPTDASAKQSAPSPPPLL--PPTPVRPPP----------PS 120
           ISFPCFGHLVMAANSPVQDPPTDASAKQSAPSP P L  PP  +  PP          P+
Sbjct: 61  ISFPCFGHLVMAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPA 120

Query: 121 PLPPLAPTTFLNPLLRIQFIFPAIPVRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKY 180
           P P   P     P        P+   RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKY
Sbjct: 121 PTP--RPDDLPQPTSPDPIHLPSYS-RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKY 180

Query: 181 LRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRR-------------------QTLKWE 240
           LRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRR                   + LKWE
Sbjct: 181 LRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWE 240

Query: 241 DRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKF 300
           DRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIAC    +F         
Sbjct: 241 DRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKF--------- 300

Query: 301 PLPFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDW 360
               DLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDW
Sbjct: 301 ----DLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDW 360

Query: 361 KKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGAS 420
           KKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGAS
Sbjct: 361 KKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGAS 420

Query: 421 IPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPI 480
           IPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPI
Sbjct: 421 IPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPI 480

Query: 481 ARNTEEQGNDVASCEGSLLRGSSMDMEKAISHIVDVQVR 488
           ARNTEEQGNDVASCEGSLLRGSSMDMEKAISHIVDVQ++
Sbjct: 481 ARNTEEQGNDVASCEGSLLRGSSMDMEKAISHIVDVQMK 503

[Close]

BLAST of IVF0012887 vs. NCBI nr
Match: XP_008453025.2 (PREDICTED: SWI/SNF complex subunit SWI3B [Cucumis melo])

HSP 1 Score: 674 bits (1738), Expect = 4.68e-239
Identity = 367/449 (81.74%), Postives = 374/449 (83.30%), Query Frame = 0


Query: 71  MAANSPVQDPPTDASAKQSAPSPPPLL--PPTPVRPPP----------PSPLPPLAPTTF 130
           MAANSPVQDPPTDASAKQSAPSP P L  PP  +  PP          P+P P   P   
Sbjct: 1   MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTP--RPDDL 60

Query: 131 LNPLLRIQFIFPAIPVRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 190
             P        P+   RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR
Sbjct: 61  PQPTSPDPIHLPSYS-RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120

Query: 191 ECPSKKITFTDIRKTLVADVGSIRR-------------------QTLKWEDRDSKSNASA 250
           ECPSKKITFTDIRKTLVADVGSIRR                   + LKWEDRDSKSNASA
Sbjct: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180

Query: 251 SNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKFPLPFDLTLCA 310
           SNTGEPGGGSANSSAPKDASKRVCSGCKSICSIAC    +F             DLTLCA
Sbjct: 181 SNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKF-------------DLTLCA 240

Query: 311 RCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGR 370
           RCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGR
Sbjct: 241 RCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGR 300

Query: 371 TERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSP 430
           TERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSP
Sbjct: 301 TERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSP 360

Query: 431 LADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGND 488
           LADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGND
Sbjct: 361 LADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGND 420

[Close]

BLAST of IVF0012887 vs. NCBI nr
Match: XP_004145606.2 (SWI/SNF complex subunit SWI3B [Cucumis sativus] >KGN55544.1 hypothetical protein Csa_011944 [Cucumis sativus])

HSP 1 Score: 632 bits (1631), Expect = 8.71e-222
Identity = 379/525 (72.19%), Postives = 401/525 (76.38%), Query Frame = 0


Query: 3   VEDLREAEPSRAQSSPAHFHIFGLLLPSTSPI-YRFSPRLSSPTI----YFVIPIYLPEL 62
           +E LR  E S+AQ SP  F      + + SP+ +     LSSP +    +    +Y PEL
Sbjct: 1   MESLR-FEGSKAQPSPFPF------IWAPSPVCFSDLSLLSSPDLTDGLFCYSDLYSPEL 60

Query: 63  PFSISFPCFGHLVMAANSPVQDPPTDASAKQSAPSPPPLL--PPTPVRPPP------PSP 122
           P SISFP    LVMAANSPVQDPPTDASAKQSAPSP P L  PP  +  PP      PS 
Sbjct: 61  PLSISFP----LVMAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSA 120

Query: 123 LPPLAPTTFLNPLLRIQFIFPA-IPV--RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVY 182
           +P  APT     L +     P  +P   RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVY
Sbjct: 121 VP--APTPRPEDLPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVY 180

Query: 183 KYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRR-------------------QTLK 242
           KYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRR                   + LK
Sbjct: 181 KYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLK 240

Query: 243 WEDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILL 302
           W+DRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIAC    +F       
Sbjct: 241 WDDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKF------- 300

Query: 303 KFPLPFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGD 362
                 DLTLCARCYVRGNYRVGV SSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGD
Sbjct: 301 ------DLTLCARCYVRGNYRVGV-SSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGD 360

Query: 363 DWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTG 422
           DWKKVAQHVGGRTERECVA FVKLPLGEQFHGYPDSEHIDNN TV KD ASANLTLESTG
Sbjct: 361 DWKKVAQHVGGRTERECVAQFVKLPLGEQFHGYPDSEHIDNNCTV-KDEASANLTLESTG 420

Query: 423 ---ASIPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGE 482
               SIPNKRIRLSPLADASNPIMAQAAFLSSLVG+EVAEAAAQAAVIKLSEMDFG DGE
Sbjct: 421 KIGTSIPNKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGE 480

Query: 483 IARPIARNTEEQGNDVASCEGSLL-RGSSMDMEKAISHIVDVQVR 488
           IA P+ARN  EQGND AS  GS L RGS+MDMEKAISHIV+VQ++
Sbjct: 481 IAIPVARNIGEQGNDAASHGGSCLSRGSTMDMEKAISHIVNVQMK 497

[Close]

BLAST of IVF0012887 vs. NCBI nr
Match: XP_038899020.1 (LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B [Benincasa hispida])

HSP 1 Score: 586 bits (1510), Expect = 1.52e-203
Identity = 344/517 (66.54%), Postives = 376/517 (72.73%), Query Frame = 0


Query: 2   EVEDLREAEPSRAQS--SPAHFHIFGLLLPSTSPI------YRFSPRLSSPTIYFVIPIY 61
           E+ED +EA+PS      +P+  H   L L ++  +      Y   PR       F+ P++
Sbjct: 5   ELEDWKEAKPSPVPYIWAPSRVHCSDLSLLASPELSDGXFCYSDGPR------SFLSPLF 64

Query: 62  LPELPFSISFPCFGHLVMAANSPVQDPPTDASAKQSAPSPPPLL--PPTPVRPPPPSPLP 121
               P S S        MAANSPVQDP  D SAKQSAPSP P L  PP  +  P  +P P
Sbjct: 65  ----PSSASESLLIVTSMAANSPVQDPSPDTSAKQSAPSPSPALVTPPLKIETPXXTPRP 124

Query: 122 PLAP-TTFLNPLLRIQFIFPAIPVRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLR 181
              P +T  +P+    +       RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLR
Sbjct: 125 EDLPQSTSPDPIHLPSYS------RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLR 184

Query: 182 NSIVKNFRECPSKKITFTDIRKTLVADVGSIRR-------------------QTLKWEDR 241
           NSIVKNFR CPSKKITFTDIRKTLVADVGSIRR                   + LKWEDR
Sbjct: 185 NSIVKNFRVCPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDR 244

Query: 242 DSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKFPL 301
           DSKSNASAS+TGEPGG SA+SSAPKDASKRVCSGCKSIC+IAC    +F           
Sbjct: 245 DSKSNASASHTGEPGGSSADSSAPKDASKRVCSGCKSICTIACFACDKF----------- 304

Query: 302 PFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKK 361
             DLTLCARCYVRGNYRVGV+SS DFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKK
Sbjct: 305 --DLTLCARCYVRGNYRVGVISS-DFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKK 364

Query: 362 VAQHVGGRTERECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIP 421
           VAQHVGGRTERECVAHFVKLPLGEQFHGYPDS H+ N YT VKDHASA LTLE TG S+P
Sbjct: 365 VAQHVGGRTERECVAHFVKLPLGEQFHGYPDSGHMGNMYTEVKDHASAGLTLERTGTSLP 424

Query: 422 NKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIAR 481
           NKRIRLSPLADASNPIMAQAAFLSSLVG+EVAEAAA AAV KLS++DFG DGEIA  IAR
Sbjct: 425 NKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVSKLSDLDFGGDGEIATTIAR 484

Query: 482 NTEEQGNDVASCEGSLLRGSSMDMEKAISHIVDVQVR 488
           N E QGND A       R SSMD+EKAISHI+DVQ++
Sbjct: 485 NIE-QGNDAAPRGRRSFRESSMDVEKAISHILDVQMK 490

[Close]

BLAST of IVF0012887 vs. NCBI nr
Match: KAG6591190.1 (SWI/SNF complex subunit SWI3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 552 bits (1422), Expect = 7.05e-191
Identity = 318/461 (68.98%), Postives = 347/461 (75.27%), Query Frame = 0


Query: 71  MAANSPVQDPPTDASAKQSAPSPPPLLPPTPVRPPPPSPLPPLAPTTFLNPLLRIQFIFP 130
           MAAN PVQDPPTDASAKQ  PSP P L   PV+   PS      P     P  R + +  
Sbjct: 1   MAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPAPTPRPEDLPQ 60

Query: 131 AI---PV------RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 190
           +    PV      RWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN+IVKNFRECP
Sbjct: 61  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNAIVKNFRECP 120

Query: 191 SKKITFTDIRKTLVADVGSIRR-------------------QTLKWEDRDSKSNASASNT 250
           SKKITFTD+RKTLVADVGSIRR                   + LKWEDRDSKSN+SAS+T
Sbjct: 121 SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRDSKSNSSASHT 180

Query: 251 GEPGGGSANSSAPKDASKRVCSGCKSICSIACLLAIRFASTCILLKFPLPFDLTLCARCY 310
           GEPGG SA+S+APKDASKRVCSGCKSICSIAC    +F             DLTLCARCY
Sbjct: 181 GEPGGSSADSAAPKDASKRVCSGCKSICSIACFACDKF-------------DLTLCARCY 240

Query: 311 VRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTER 370
           VRGNYRVGV SSSDFRRVEIND+TRTDWTDKETLHLLEALTH+GDDWKKVAQHVGGRTER
Sbjct: 241 VRGNYRVGV-SSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTER 300

Query: 371 ECVAHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLAD 430
           ECVAHFVKLPLGEQF GYPDS ++    TVVKDHASA+LTLEST   + +KRIRLSPLAD
Sbjct: 301 ECVAHFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLEST--PLTSKRIRLSPLAD 360

Query: 431 ASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVAS 488
           ASNPIMAQAAFLSSLVG+EVAEAAA AAV+KLS+M FG DGEIA  +ARN  +QGNDV S
Sbjct: 361 ASNPIMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVS 420

[Close]

BLAST of IVF0012887 vs. TAIR 10
Match: AT2G33610.1 (switch subunit 3 )

HSP 1 Score: 308.5 bits (789), Expect = 9.6e-84
Identity = 180/384 (46.88%), Postives = 239/384 (62.24%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WFSW  I++CEVR LPEFFDSRS SKNP+ Y YLRNSI+K +R+   +KI+FTD+R+TLV
Sbjct: 56  WFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLV 115

Query: 196 ADVGSIRR-------------------QTLKWEDRDSKSNASASNTGEPGGGSANSSAP- 255
           +DV SIRR                   + LKWE++++         G+  G +A+  A  
Sbjct: 116 SDVVSIRRVFDFLDSWGLINYNSSASAKPLKWEEKEA---------GKSAGDAASEPATT 175

Query: 256 -KDASKRVCSGCKSICSIACLLAIRFASTCILLKFPLPFDLTLCARCYVRGNYRVGVVSS 315
            K+ +KR C+GCK+ICSIAC    +             +DLTLCARCYVR NYRVG ++S
Sbjct: 176 VKETAKRNCNGCKAICSIACFACDK-------------YDLTLCARCYVRSNYRVG-INS 235

Query: 316 SDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPLG 375
           S+F+RVEI+++++ +W+DKE L LLEA+ HYGDDWKKVA HV GRTE++CV+ FVKLP G
Sbjct: 236 SEFKRVEISEESKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFG 295

Query: 376 EQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAAFL 435
           EQF    DSE     +  +KD             S PNKRI+L+PLADASNPIMAQAAFL
Sbjct: 296 EQFVKESDSEDGLEMFDQIKDSDIPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFL 355

Query: 436 SSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIAR----------NTEEQGNDVASCE 489
           S+L G  VAEAAA+AAV  LS++D+  D   +R   R           T  +     +  
Sbjct: 356 SALAGTNVAEAAARAAVRALSDVDYEADKNASRDPNRQDANAASSGETTRNESERAWADA 415

[Close]

BLAST of IVF0012887 vs. TAIR 10
Match: AT2G47620.1 (SWITCH/sucrose nonfermenting 3A )

HSP 1 Score: 110.9 bits (276), Expect = 2.9e-24
Identity = 97/351 (27.64%), Postives = 166/351 (47.29%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WF W+ IHE E R   EFF   S ++ P+VYK  R+ I+  FRE   +++TFT +RK LV
Sbjct: 21  WFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLTFTSVRKFLV 80

Query: 196 ADVGSIRR--------------QTLKWEDRDSKSNASASNTGEPGG----GSANS----S 255
            DV  +++               +LK  D     + +    G P G     + NS    +
Sbjct: 81  GDVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVTATPNSLRPIT 140

Query: 256 APKDASKRVCSGCK--SICSIACLLAIRFASTCILL------KFPLPF------DLTLCA 315
           AP    +RV +G K   + S + + +       +L+      +   PF       + +C 
Sbjct: 141 APPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCDSPFYQHNKGIVNICE 200

Query: 316 RCYVRGNYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGR 375
           +C+  GNY  G  +++D  ++ I +     WT++E L LLE++  +GDDW+ ++Q V  +
Sbjct: 201 KCFKNGNY--GENNTADDFKL-IGNSAAAVWTEEEILLLLESVLKHGDDWELISQSVSTK 260

Query: 376 TERECVAHFVKLPLGEQFHG----------YPDSEHIDNNYTVVKDHASANLTLESTGA- 435
           +  +C++  ++LP GE   G            + E+ +   T  ++H       E     
Sbjct: 261 SRLDCISKLIELPFGEFLMGSASGRLNPSILTEDENTEQVQTDGQEHEETETREEKEDRV 320

Query: 436 ---SIPNKRIRLSPLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSE 437
                P KR R++ +++  + +M Q A ++S VG  VA AAA+AA+  L +
Sbjct: 321 NEDEPPAKRKRVALISEGDSSLMKQVAAMASKVGPSVATAAAKAALAALCD 368

[Close]

BLAST of IVF0012887 vs. TAIR 10
Match: AT1G21700.1 (SWITCH/sucrose nonfermenting 3C )

HSP 1 Score: 108.2 bits (269), Expect = 1.9e-23
Identity = 101/357 (28.29%), Postives = 155/357 (43.42%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTL- 195
           WF+ N +   E + +P+FF  +SP+  P  Y   RN+IV  + E P K +T +D +  + 
Sbjct: 184 WFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVD 243

Query: 196 VADVGSIRRQTLKWEDRDSKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIAC 255
             D+    R   ++ D     N  A+    PG     S   +D +  V     ++ SI  
Sbjct: 244 GVDIEDFAR-VFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDS 303

Query: 256 L----------------------------LAIRFA-----STCILLKFPLPF-------- 315
           L                            L IR       S C     PLP         
Sbjct: 304 LIKFDKPNCRHKGGEVYSSLPSLDGDSPDLDIRIREHLCDSHCNHCSRPLPTVYFQSQKK 363

Query: 316 -DLTLCARCYVRGNYRVGVVSSSDFRRVE----INDDTRTDWTDKETLHLLEALTHYGDD 375
            D+ LC  C+  G + VG  S  DF RV+      D    +WTD+ETL LLEA+  Y ++
Sbjct: 364 GDILLCCDCFHHGRFVVG-HSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNEN 423

Query: 376 WKKVAQHVGGRTERECVAHFVKLPLGE------QFHGYPDSEHIDNNYTVVKDHASANLT 435
           W ++A HVG +++ +C+ HF++LP+ +      +  G  ++E+  N Y    DH   +  
Sbjct: 424 WVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGY----DHKGTDSN 483

Query: 436 LESTGASIPNKRIRLS-PLADASNPIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMD 439
            +  G S       +  P   + NP+MA  AFL+S VG  VA + A  ++  LSE D
Sbjct: 484 GDLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDD 534

[Close]

BLAST of IVF0012887 vs. TAIR 10
Match: AT4G34430.1 (DNA-binding family protein )

HSP 1 Score: 82.8 bits (203), Expect = 8.5e-16
Identity = 78/314 (24.84%), Postives = 127/314 (40.45%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WFSW  IH  E R LP FF+ +   +   VY+ +RN I+  F   P+ +I   D+ +  V
Sbjct: 153 WFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEV 212

Query: 196 ADVGSIRRQTLKWED------------RDSKSNASASN---------------------- 255
            D    +++ +++ D             D+ S AS  +                      
Sbjct: 213 GD-SEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQVDEACP 272

Query: 256 ----------TGEPGGGSANSSAPKDASKRV-------CSGCKSICSIACLLAIRFASTC 315
                        P G   +  A  +  K+        C+ C + CS       R    C
Sbjct: 273 PLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCS-------RKRYHC 332

Query: 316 ILLKFPLPFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRT---DWTDKETLHLLEA 375
                P   D  LC  C+  G +    +SSSDF  +E  +        WTD+ETL LLEA
Sbjct: 333 -----PKQADFDLCTECFNSGKFS-SDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEA 392

Query: 376 LTHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPD-SEHIDNNYTVVKDHASAN 395
           L  + ++W ++A+HV  +T+ +C+ HF+++P+ + F    D  + I  + T +      N
Sbjct: 393 LEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDN 452

[Close]

BLAST of IVF0012887 vs. TAIR 10
Match: AT4G34430.4 (DNA-binding family protein )

HSP 1 Score: 82.8 bits (203), Expect = 8.5e-16
Identity = 78/314 (24.84%), Postives = 127/314 (40.45%), Query Frame = 0


Query: 136 WFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLV 195
           WFSW  IH  E R LP FF+ +   +   VY+ +RN I+  F   P+ +I   D+ +  V
Sbjct: 153 WFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEV 212

Query: 196 ADVGSIRRQTLKWED------------RDSKSNASASN---------------------- 255
            D    +++ +++ D             D+ S AS  +                      
Sbjct: 213 GD-SEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQVDEACP 272

Query: 256 ----------TGEPGGGSANSSAPKDASKRV-------CSGCKSICSIACLLAIRFASTC 315
                        P G   +  A  +  K+        C+ C + CS       R    C
Sbjct: 273 PLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCS-------RKRYHC 332

Query: 316 ILLKFPLPFDLTLCARCYVRGNYRVGVVSSSDFRRVEINDDTRT---DWTDKETLHLLEA 375
                P   D  LC  C+  G +    +SSSDF  +E  +        WTD+ETL LLEA
Sbjct: 333 -----PKQADFDLCTECFNSGKFS-SDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEA 392

Query: 376 LTHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPD-SEHIDNNYTVVKDHASAN 395
           L  + ++W ++A+HV  +T+ +C+ HF+++P+ + F    D  + I  + T +      N
Sbjct: 393 LEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDN 452

The following BLAST results are available for this feature:

BLAST of IVF0012887 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JG2	1.3e-82	46.88	SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana OX=3702 GN=SWI3B PE=1 SV=1	[more]
Q8TAQ2	3.2e-23	27.62	SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=SMARCC2 PE=1 SV=1	[more]
P97496	5.4e-23	28.99	SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2	[more]
Q6PDG5	5.4e-23	27.62	SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2	[more]
Q92922	7.0e-23	28.99	SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3	[more]

BLAST of IVF0012887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D8W2	1.8e-231	84.72	SWI/SNF complex subunit SWI3B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BW08	1.7e-189	82.33	SWI/SNF complex subunit SWI3B OS=Cucumis melo OX=3656 GN=LOC103493854 PE=4 SV=1	[more]
A0A0A0L3F9	5.7e-177	72.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664510 PE=4 SV=1	[more]
A0A6J1IDY0	9.8e-153	69.26	SWI/SNF complex subunit SWI3B OS=Cucurbita maxima OX=3661 GN=LOC111474552 PE=4 S...	[more]
A0A6J1F6D7	6.4e-152	68.55	SWI/SNF complex subunit SWI3B OS=Cucurbita moschata OX=3662 GN=LOC111442757 PE=4...	[more]

BLAST of IVF0012887 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064672.1	1.84e-293	84.20	SWI/SNF complex subunit SWI3B [Cucumis melo var. makuwa] >TYK19919.1 SWI/SNF com...	[more]
XP_008453025.2	4.68e-239	81.74	PREDICTED: SWI/SNF complex subunit SWI3B [Cucumis melo]	[more]
XP_004145606.2	8.71e-222	72.19	SWI/SNF complex subunit SWI3B [Cucumis sativus] >KGN55544.1 hypothetical protein...	[more]
XP_038899020.1	1.52e-203	66.54	LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B [Benincasa hispida]	[more]
KAG6591190.1	7.05e-191	68.98	SWI/SNF complex subunit SWI3B, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of IVF0012887 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33610.1	9.6e-84	46.88	switch subunit 3	[more]
AT2G47620.1	2.9e-24	27.64	SWITCH/sucrose nonfermenting 3A	[more]
AT1G21700.1	1.9e-23	28.29	SWITCH/sucrose nonfermenting 3C	[more]
AT4G34430.1	8.5e-16	24.84	DNA-binding family protein	[more]
AT4G34430.4	8.5e-16	24.84	DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 306..354 e-value: 7.7E-10 score: 48.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 307..352 score: 7.886227
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 310..351 e-value: 6.75646E-9 score: 49.4962
IPR007526	SWIRM domain	PFAM	PF04433	SWIRM	coord: 135..203 e-value: 4.2E-15 score: 55.9
IPR007526	SWIRM domain	PROSITE	PS50934	SWIRM	coord: 128..226 score: 14.218134
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 134..205 e-value: 7.9E-19 score: 69.4
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 308..351 e-value: 7.2E-12 score: 45.3
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 307..344 score: 10.089746
None	No IPR available	GENE3D	1.10.10.60		coord: 306..355 e-value: 7.1E-15 score: 56.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..110
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 78..488
None	No IPR available	PANTHER	PTHR12802:SF44	SWI/SNF COMPLEX SUBUNIT SWI3B	coord: 78..488
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 305..356 score: 19.424597
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 135..203
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 307..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012887.1	IVF0012887.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding