IVF0012852 (gene) Melon (IVF77) v1

Overview
NameIVF0012852
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Locationchr05: 17079409 .. 17079909 (-)
RNA-Seq ExpressionIVF0012852
SyntenyIVF0012852
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGAAACTACTTGGATGTCAGGTCCGAGCAACGGCTACAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCCGGAGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGTGGAGAAGGAATTATTTAATAATTGGGTTAGGGTAAGGAAAATAATATAAGCATCACACAACGTTCACAATGTACATTTACTTAACAATTTTTCAATCAGTACTCATACGTGATATTTTCTTTCCCCGCAGTCGCATCCTGCAGCGAAGGGACTCTTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACCGATCGGTTCGTTGAGACATTCGCGGACGTCGGGTCTAATGAGCCTGGTGGCGGATATGACAGATTTGATATGGAGGATGGAAACGAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTTTCGTAG

mRNA sequence

ATGGCGGAGAAACTACTTGGATGTCAGGTCCGAGCAACGGCTACAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCCGGAGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGTGGAGAAGGAATTATTTAATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCTTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACCGATCGGTTCGTTGAGACATTCGCGGACGTCGGGTCTAATGAGCCTGGTGGCGGATATGACAGATTTGATATGGAGGATGGAAACGAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTTTCGTAG

Coding sequence (CDS)

ATGGCGGAGAAACTACTTGGATGTCAGGTCCGAGCAACGGCTACAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCCGGAGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGTGGAGAAGGAATTATTTAATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCTTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACCGATCGGTTCGTTGAGACATTCGCGGACGTCGGGTCTAATGAGCCTGGTGGCGGATATGACAGATTTGATATGGAGGATGGAAACGAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTTTCGTAG

Protein sequence

MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNEEFPPVYSQGIDLS
Homology
[Close]
BLAST of IVF0012852 vs. ExPASy TrEMBL
Match: A0A5D3CBF5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00540 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.6e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW
Sbjct: 2   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 61

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE
Sbjct: 62  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 121

Query: 121 EFPPVYSQGIDLS 134
           EFPPVYSQGIDLS
Sbjct: 122 EFPPVYSQGIDLS 134

[Close]
BLAST of IVF0012852 vs. ExPASy TrEMBL
Match: A0A5A7T2T9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00580 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67
Identity = 120/133 (90.23%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKLLGCQVRAT  IDCRIKTLK+TFQAIAEM +PACSGFGWNDEEKCI+ EKELF+NW
Sbjct: 52  MAEKLLGCQVRATTVIDCRIKTLKQTFQAIAEMRDPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRF ETFADVGSNEPGGGYDRFDM DGNE
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 EFPPVYSQGIDLS 134
           +FPPVYSQG+D+S
Sbjct: 172 DFPPVYSQGVDIS 184

[Close]
BLAST of IVF0012852 vs. ExPASy TrEMBL
Match: A0A5D3DBP4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00340 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 121/133 (90.98%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKL GCQVRAT  IDCRIKTLKRTFQAIAEM +PACSGFGWNDEEKCI+ EKELF+NW
Sbjct: 2   MAEKLPGCQVRATTIIDCRIKTLKRTFQAIAEMRDPACSGFGWNDEEKCIVAEKELFDNW 61

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           V+SHPAAKGLLNKPFPYYDELTYVF RDRATDRFVETFADVGSNEPGGGYDRFDM DGNE
Sbjct: 62  VKSHPAAKGLLNKPFPYYDELTYVFDRDRATDRFVETFADVGSNEPGGGYDRFDMGDGNE 121

Query: 121 EFPPVYSQGIDLS 134
           +FPPVYSQGIDLS
Sbjct: 122 DFPPVYSQGIDLS 134

[Close]
BLAST of IVF0012852 vs. ExPASy TrEMBL
Match: A0A5A7TGP1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00540 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 122/133 (91.73%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKL GCQVRAT  IDCRIKTLKRTFQAIAEM  PACSGFGWNDEEKCI+VEKELF+NW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMWGPACSGFGWNDEEKCIVVEKELFDNW 111

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           VRSHPAAKGLLNKPFPYYDELTYVFGRDRAT RF ETFADVGSNEPGGGYDRFDM DGNE
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 EFPPVYSQGIDLS 134
           +FPPVYSQGIDLS
Sbjct: 172 DFPPVYSQGIDLS 184

[Close]
BLAST of IVF0012852 vs. ExPASy TrEMBL
Match: A0A5A7TFA4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00550 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.2e-66
Identity = 119/133 (89.47%), Postives = 124/133 (93.23%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKL GCQVRAT  IDCRIKTLKRTFQAI EM  PACSGFGWNDEEKCI+ EKELF+NW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIVEMRGPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRF ETFADVGSNEPGGGYDRFDM DGNE
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 EFPPVYSQGIDLS 134
           +FPPVYSQG+D+S
Sbjct: 172 DFPPVYSQGVDIS 184

[Close]
BLAST of IVF0012852 vs. NCBI nr
Match: KAA0049908.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK07649.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 284 bits (727), Expect = 6.66e-97
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW
Sbjct: 2   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 61

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE
Sbjct: 62  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 121

Query: 121 EFPPVYSQGIDLS 133
           EFPPVYSQGIDLS
Sbjct: 122 EFPPVYSQGIDLS 134

[Close]
BLAST of IVF0012852 vs. NCBI nr
Match: KAA0057590.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK21004.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (668), Expect = 6.66e-88
Identity = 121/133 (90.98%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKL GCQVRAT  IDCRIKTLKRTFQAIAEM +PACSGFGWNDEEKCI+ EKELF+NW
Sbjct: 2   MAEKLPGCQVRATTIIDCRIKTLKRTFQAIAEMRDPACSGFGWNDEEKCIVAEKELFDNW 61

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           V+SHPAAKGLLNKPFPYYDELTYVF RDRATDRFVETFADVGSNEPGGGYDRFDM DGNE
Sbjct: 62  VKSHPAAKGLLNKPFPYYDELTYVFDRDRATDRFVETFADVGSNEPGGGYDRFDMGDGNE 121

Query: 121 EFPPVYSQGIDLS 133
           +FPPVYSQGIDLS
Sbjct: 122 DFPPVYSQGIDLS 134

[Close]
BLAST of IVF0012852 vs. NCBI nr
Match: KAA0035775.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 264 bits (675), Expect = 1.76e-86
Identity = 120/133 (90.23%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKLLGCQVRAT  IDCRIKTLK+TFQAIAEM +PACSGFGWNDEEKCI+ EKELF+NW
Sbjct: 52  MAEKLLGCQVRATTVIDCRIKTLKQTFQAIAEMRDPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRF ETFADVGSNEPGGGYDRFDM DGNE
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 EFPPVYSQGIDLS 133
           +FPPVYSQG+D+S
Sbjct: 172 DFPPVYSQGVDIS 184

[Close]
BLAST of IVF0012852 vs. NCBI nr
Match: KAA0042500.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (666), Expect = 2.38e-85
Identity = 122/133 (91.73%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKL GCQVRAT  IDCRIKTLKRTFQAIAEM  PACSGFGWNDEEKCI+VEKELF+NW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMWGPACSGFGWNDEEKCIVVEKELFDNW 111

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           VRSHPAAKGLLNKPFPYYDELTYVFGRDRAT RF ETFADVGSNEPGGGYDRFDM DGNE
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 EFPPVYSQGIDLS 133
           +FPPVYSQGIDLS
Sbjct: 172 DFPPVYSQGIDLS 184

[Close]
BLAST of IVF0012852 vs. NCBI nr
Match: TYK10915.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 259 bits (661), Expect = 4.69e-85
Identity = 119/133 (89.47%), Postives = 124/133 (93.23%), Query Frame = 0 

Query: 1   MAEKLLGCQVRATATIDCRIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNW 60
           MAEKL GCQVRAT  IDCRIKTLKRTFQAIAEM  PACSGFGWNDEEKCI+ EKELF+NW
Sbjct: 2   MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 61

Query: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNE 120
           VRSHPAAKGLLNKPFPYYDELTYVFGRDRAT RF ETFADVGSNEPGGGYDRFDM DGNE
Sbjct: 62  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 121

Query: 121 EFPPVYSQGIDLS 133
           +FPPVYSQG+D+S
Sbjct: 122 DFPPVYSQGVDIS 134

[Close]
BLAST of IVF0012852 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07
Identity = 21/76 (27.63%), Postives = 42/76 (55.26%), Query Frame = 0 

Query: 19  RIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNWVRSHPAAKGLLNKPFPYY 78
           R K L+R +  I  + E   +GF W+     +I + +++N ++++HP A+    K  P Y
Sbjct: 381 RYKHLRRLYNDIKFLLEQ--NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSY 440

Query: 79  DELTYVFGRDRATDRF 95
             L ++FG++ +  R+
Sbjct: 441 PNLCFIFGKETSDGRY 454

[Close]
BLAST of IVF0012852 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06
Identity = 27/104 (25.96%), Postives = 50/104 (48.08%), Query Frame = 0 

Query: 19  RIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNWVRSHPAAKGLLNKPFPYY 78
           R K+L+R F AI  +      GF W++E + +  +  ++ +++++H  A+  + +P PYY
Sbjct: 240 RYKSLRRQFNAIKSILR--SDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYY 299

Query: 79  DELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNEEF 123
            +L  + G            + +  NE     D FD E   +EF
Sbjct: 300 KDLCVLCGD-----------SGIEENECFVAMDWFDPETEFQEF 330

[Close]
BLAST of IVF0012852 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06
Identity = 27/104 (25.96%), Postives = 50/104 (48.08%), Query Frame = 0 

Query: 19  RIKTLKRTFQAIAEMPEPACSGFGWNDEEKCIIVEKELFNNWVRSHPAAKGLLNKPFPYY 78
           R K+L+R F AI  +      GF W++E + +  +  ++ +++++H  A+  + +P PYY
Sbjct: 240 RYKSLRRQFNAIKSILR--SDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYY 299

Query: 79  DELTYVFGRDRATDRFVETFADVGSNEPGGGYDRFDMEDGNEEF 123
            +L  + G            + +  NE     D FD E   +EF
Sbjct: 300 KDLCVLCGD-----------SGIEENECFVAMDWFDPETEFQEF 330

The following BLAST results are available for this feature:
BLAST of IVF0012852 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0012852 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CBF51.6e-73100.00Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T2T91.7e-6790.23Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DBP41.1e-6690.98Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TGP11.9e-6691.73Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TFA43.2e-6689.47Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of IVF0012852 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0049908.16.66e-97100.00retrotransposon protein [Cucumis melo var. makuwa] >TYK07649.1 retrotransposon p... [more]
KAA0057590.16.66e-8890.98retrotransposon protein [Cucumis melo var. makuwa] >TYK21004.1 retrotransposon p... [more]
KAA0035775.11.76e-8690.23retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0042500.12.38e-8591.73retrotransposon protein [Cucumis melo var. makuwa][more]
TYK10915.14.69e-8589.47retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon p... [more]
BLAST of IVF0012852 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24960.23.3e-0727.63unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G02210.12.8e-0625.96unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.22.8e-0625.96unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 1..101
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0012852.1IVF0012852.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane