IVF0012847 (gene) Melon (IVF77) v1

Overview
NameIVF0012847
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type E3 ubiquitin transferase
Locationchr11: 598423 .. 599223 (+)
RNA-Seq ExpressionIVF0012847
SyntenyIVF0012847
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTTCTCAAACTCAAAAACATTTAAAATCCCAAAAACAAACCTTAAAACAAAAAGAGAAAAGAAAAAAAATGTCAATTGCTACCATTTCTACAAATATTCATCATGAAGTGTTTCGTTATTCAAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCGCCGCCGCTCCCTCCGCCGTCCACGACCAATCCGAATTCTACTCCGGCGGAGACAGCACTACCTTCGACACCAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATCTGCTCCTTAGCCCTCAACTCCGTCATCCGATGCGCTTTGAAATGCTCCCGTTTCCTCGTCTCCAATGACCACCGCCGCCACCCCGCCCCCACCTCCACCGGAGTCCATAAGAAAGCCATCAAGAGCTTCACCGTGGTTCAATTCTCCCCGGACCTCAACCTCCCCGGCCTCGACTCCGAGTGCGTCATTTGCTTATCGGAGTTCGTCACCGGCGACAAGCTCCGGCTTCTCCCGAAATGTAACCATGGGTTTCACGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGGCAGTGTTTGGTTCAGACTTGTGAGAAAATCGCCGGCGTTATTGCCTCTGCCTCCGCCTCCTCCTCTTCCGGCCACTCTCCGTCTCCTCCTCCTCCTCCTCCGCCGCCGTCTGTGGTTGTGAACTTAGCGCCGCTGGAACCTGAAGCTCCGGTACGGAATTTACGGCTGTAATATAATTAATTAATAGAGATTATAATACGAATTAGGGG

mRNA sequence

TCCTTCTCAAACTCAAAAACATTTAAAATCCCAAAAACAAACCTTAAAACAAAAAGAGAAAAGAAAAAAAATGTCAATTGCTACCATTTCTACAAATATTCATCATGAAGTGTTTCGTTATTCAAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCGCCGCCGCTCCCTCCGCCGTCCACGACCAATCCGAATTCTACTCCGGCGGAGACAGCACTACCTTCGACACCAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATCTGCTCCTTAGCCCTCAACTCCGTCATCCGATGCGCTTTGAAATGCTCCCGTTTCCTCGTCTCCAATGACCACCGCCGCCACCCCGCCCCCACCTCCACCGGAGTCCATAAGAAAGCCATCAAGAGCTTCACCGTGGTTCAATTCTCCCCGGACCTCAACCTCCCCGGCCTCGACTCCGAGTGCGTCATTTGCTTATCGGAGTTCGTCACCGGCGACAAGCTCCGGCTTCTCCCGAAATGTAACCATGGGTTTCACGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGGCAGTGTTTGGTTCAGACTTGTGAGAAAATCGCCGGCGTTATTGCCTCTGCCTCCGCCTCCTCCTCTTCCGGCCACTCTCCGTCTCCTCCTCCTCCTCCTCCGCCGCCGTCTGTGGTTGTGAACTTAGCGCCGCTGGAACCTGAAGCTCCGGTACGGAATTTACGGCTGTAATATAATTAATTAATAGAGATTATAATACGAATTAGGGG

Coding sequence (CDS)

ATGTCAATTGCTACCATTTCTACAAATATTCATCATGAAGTGTTTCGTTATTCAAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCGCCGCCGCTCCCTCCGCCGTCCACGACCAATCCGAATTCTACTCCGGCGGAGACAGCACTACCTTCGACACCAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATCTGCTCCTTAGCCCTCAACTCCGTCATCCGATGCGCTTTGAAATGCTCCCGTTTCCTCGTCTCCAATGACCACCGCCGCCACCCCGCCCCCACCTCCACCGGAGTCCATAAGAAAGCCATCAAGAGCTTCACCGTGGTTCAATTCTCCCCGGACCTCAACCTCCCCGGCCTCGACTCCGAGTGCGTCATTTGCTTATCGGAGTTCGTCACCGGCGACAAGCTCCGGCTTCTCCCGAAATGTAACCATGGGTTTCACGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGGCAGTGTTTGGTTCAGACTTGTGAGAAAATCGCCGGCGTTATTGCCTCTGCCTCCGCCTCCTCCTCTTCCGGCCACTCTCCGTCTCCTCCTCCTCCTCCTCCGCCGCCGTCTGTGGTTGTGAACTTAGCGCCGCTGGAACCTGAAGCTCCGGTACGGAATTTACGGCTGTAA

Protein sequence

MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL
Homology
[Close]
BLAST of IVF0012847 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-53
Identity = 123/234 (52.56%), Postives = 155/234 (66.24%), Query Frame = 0 

Query: 1   MSIATIS-TNIHHEVF--RYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDT 60
           +SI+TI  T I  E+    YSRKLL H+  H  S T A    V D +          FD 
Sbjct: 7   ISISTIKPTEIFQEILGSSYSRKLLFHT--HDQSPTPAPSPYVGDNN----------FDA 66

Query: 61  NVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSN-DHRRHPAP-TSTGVHKKAIKSFT 120
           NVVMVLSVLLCAL+CSL LNS+IRCAL+CS  + S      +P   T+TGV +KA+KSF 
Sbjct: 67  NVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQ 126

Query: 121 VVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQ 180
            V +S +LNLPGLD+EC ICLSEFV  ++++LLP C+HGFHV+CIDKWLSSHSSCP CR 
Sbjct: 127 TVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRH 186

Query: 181 CLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLR 230
           CL+QTCEKIA    ++S +S+          PP  S+++ +APLEPE  +R  R
Sbjct: 187 CLIQTCEKIADCSQTSSLNSTQ---------PPQDSIILQIAPLEPERWIRWFR 219

[Close]
BLAST of IVF0012847 vs. ExPASy Swiss-Prot
Match: Q6NML0 (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45
Identity = 102/218 (46.79%), Postives = 136/218 (62.39%), Query Frame = 0 

Query: 18  SRKLLLHSSL--HKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICSLA 77
           +RKLLLH     + L   A APS +        G        NV+M+LSVL+C +IC L 
Sbjct: 23  TRKLLLHDPFDHNSLRVFAVAPSPLITHENNLKG--------NVLMLLSVLICGIICCLG 82

Query: 78  LNSVIRCAL-KCSRFLVSNDHRRHPAPTST---GVHKKAIKSFTVVQFSPDLNLPGLDSE 137
           L+ +IRCA  + SRF++S        P S+   G+ KKA++ F VV +S ++NLPG+  E
Sbjct: 83  LHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEE 142

Query: 138 CVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVIASA 197
           CVICLS+FV+G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TC+KI G  + A
Sbjct: 143 CVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFSQA 202

Query: 198 SASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLR 230
            + +S+          P  SV+V + PLEPE  V   R
Sbjct: 203 DSMAST----------PTESVIVRIDPLEPEGRVNTFR 222

[Close]
BLAST of IVF0012847 vs. ExPASy Swiss-Prot
Match: Q94BY6 (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.8e-45
Identity = 101/218 (46.33%), Postives = 139/218 (63.76%), Query Frame = 0 

Query: 18  SRKLLLHSSL--HKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICSLA 77
           SRKLLLH+    +     A APS +       SG        NV+M+LSVL+C +IC L 
Sbjct: 24  SRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSG--------NVLMLLSVLICGIICCLG 83

Query: 78  LNSVIRCAL-KCSRFLVSNDHRRHPAP---TSTGVHKKAIKSFTVVQFSPDLNLPGLDSE 137
           L+ +IRCA  + S F++S        P   ++ G++KKA++ F VV +SP++NLPGL  E
Sbjct: 84  LHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEE 143

Query: 138 CVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVIASA 197
           CVICLS+FV+G+++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+TC+KI G  + A
Sbjct: 144 CVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQA 203

Query: 198 SASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLR 230
              +++          P  SV+V +APLEPE  V  LR
Sbjct: 204 DQVAAT----------PTASVIVRIAPLEPEGRVNILR 223

[Close]
BLAST of IVF0012847 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 9.7e-44
Identity = 108/239 (45.19%), Postives = 144/239 (60.25%), Query Frame = 0 

Query: 18  SRKLLLHSSL--HKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICSLA 77
           SRKLLLH+    +     A APS +       SG        NV+M+LS+L+C +IC L 
Sbjct: 23  SRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSG--------NVMMLLSILICGIICCLG 82

Query: 78  LNSVIRCALKCS-RFLVSNDHRRHPAP--------TSTGVHKKAIKSFTVVQFSPDLNLP 137
           L+ +IRCAL+ S RF++S      P P        ++ G+ KKA++ F VV +SP++NLP
Sbjct: 83  LHYIIRCALRRSTRFMIS-----EPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLP 142

Query: 138 GLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAG 197
           GLD ECVICLS+FV+G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TC+KI G
Sbjct: 143 GLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILG 202

Query: 198 VIASASASSSSGHS-------PSPP---------PPPPPPSVVVNLAPLEPEAPVRNLR 230
             + A + ++           P  P         P  P   V+V +APLEPE  V  +R
Sbjct: 203 DFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLEPTEIVIVMIAPLEPEGRVNTIR 248

[Close]
BLAST of IVF0012847 vs. ExPASy Swiss-Prot
Match: Q9LS99 (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.9e-41
Identity = 84/184 (45.65%), Postives = 118/184 (64.13%), Query Frame = 0 

Query: 51  DSTTFDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHP-----APTSTG 110
           D      NV+M+LS+LLC +ICSL L+ +IRCA   SR  + +D    P     +  + G
Sbjct: 44  DKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKG 103

Query: 111 VHKKAIKSFTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLS 170
           + KKA+K   VV +SP++NLPG+  ECVICLS+FV G++LR+LPKCNHGFH++CIDKWL+
Sbjct: 104 IKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLT 163

Query: 171 SHSSCPKCRQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPV 230
            H +CPKCR CLV TC+K+     +A   +++             S+ + ++PLEPEA V
Sbjct: 164 QHMTCPKCRHCLVDTCQKVLSDCDAADQVAATA----------TESIDIRISPLEPEARV 217

[Close]
BLAST of IVF0012847 vs. ExPASy TrEMBL
Match: A0A5A7TCX2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00810 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV 60
           MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV
Sbjct: 1   MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV 60

Query: 61  MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS 120
           MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS
Sbjct: 61  MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS 120

Query: 121 PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT 180
           PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT
Sbjct: 121 PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT 180

Query: 181 CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 231
           CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL
Sbjct: 181 CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230

[Close]
BLAST of IVF0012847 vs. ExPASy TrEMBL
Match: A0A1S3CDJ3 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499651 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV 60
           MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV
Sbjct: 1   MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV 60

Query: 61  MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS 120
           MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS
Sbjct: 61  MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS 120

Query: 121 PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT 180
           PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT
Sbjct: 121 PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT 180

Query: 181 CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 231
           CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL
Sbjct: 181 CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230

[Close]
BLAST of IVF0012847 vs. ExPASy TrEMBL
Match: A0A0A0LQ73 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G301540 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.6e-103
Identity = 205/237 (86.50%), Postives = 211/237 (89.03%), Query Frame = 0 

Query: 1   MSIATISTNI----HHEVFRYSRKLLLHSSLHKLSFT---AAAPSAVHDQSEFYSGGDST 60
           MSIA+ISTN      H+VF YSRKLLLHSSLHKLSFT   AA PSAVHDQSEFYSGGDST
Sbjct: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60

Query: 61  TFDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKS 120
           TFDTNVVMVLSVLLCALICSLALNS+IRCALKCSR +VSNDHR    PTSTGVHKKAIKS
Sbjct: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRLTPTSTGVHKKAIKS 120

Query: 121 FTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180
           FTVVQFS DLNLPGLD ECVICLSEF TGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC
Sbjct: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180

Query: 181 RQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 231
           RQCLVQTCEKIAGV ASASAS+SS  S   P PPPPPSVVV+LAPLEPEAPVRNLRL
Sbjct: 181 RQCLVQTCEKIAGV-ASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 236

[Close]
BLAST of IVF0012847 vs. ExPASy TrEMBL
Match: A0A6J1L4E9 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499787 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.2e-75
Identity = 155/232 (66.81%), Postives = 185/232 (79.74%), Query Frame = 0 

Query: 3   IATISTNIH-HEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYS-GGDSTTFDTNVV 62
           ++ + T+IH H+ F YSRKL          FTAAAPSA+H+  +  S GG  T+FDTNVV
Sbjct: 1   MSILFTSIHGHQEFHYSRKL----------FTAAAPSALHNPLQSISGGGPDTSFDTNVV 60

Query: 63  MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTS--TGVHKKAIKSFTVVQ 122
           MVLSVLLCALICSL LNS+IRCA KCSR +VS+DHR   A T+  TGVHKKAIKSFTVVQ
Sbjct: 61  MVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPPSATTAVPTGVHKKAIKSFTVVQ 120

Query: 123 FSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLV 182
           FSP+LN PG+DSEC+ICLS+F  GDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLV
Sbjct: 121 FSPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLV 180

Query: 183 QTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 231
           QTC+KIAGV  +++++S+SG  PS PPPP     V+NL P++ E PVRNLR+
Sbjct: 181 QTCQKIAGV-GTSTSTSTSGQPPSQPPPP-----VLNLTPVDHEGPVRNLRV 216

[Close]
BLAST of IVF0012847 vs. ExPASy TrEMBL
Match: A0A6J1EJK6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434900 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.1e-74
Identity = 165/236 (69.92%), Postives = 182/236 (77.12%), Query Frame = 0 

Query: 1   MSIATISTNIHH--EVFRYSRKLLLHSSLHKLSFTAAAPSAV-HDQSEFYSGGDSTTFDT 60
           +SI++    IHH  +VF YSRKLLLHSSLH L+FTA APS+V H   E Y      TFDT
Sbjct: 4   VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDT 63

Query: 61  NVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTS---TGVHKKAIKSF 120
           NVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D   HP+ T+    GVHKKAIKSF
Sbjct: 64  NVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD--THPSSTTAAPVGVHKKAIKSF 123

Query: 121 TVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
           T+VQFS DLNLPGLDSECVICLS+FV G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR
Sbjct: 124 TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 183

Query: 181 QCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 231
           QCLVQT +KIAGV          G   SPPPP       +NLAPL+PEA VRNL L
Sbjct: 184 QCLVQTSQKIAGV----------GGPTSPPPP------AINLAPLDPEARVRNLWL 215

[Close]
BLAST of IVF0012847 vs. NCBI nr
Match: XP_008460910.1 (PREDICTED: RING-H2 finger protein ATL78-like [Cucumis melo] >KAA0040778.1 RING-H2 finger protein ATL78-like [Cucumis melo var. makuwa] >TYK02094.1 RING-H2 finger protein ATL78-like [Cucumis melo var. makuwa])

HSP 1 Score: 451 bits (1161), Expect = 6.80e-160
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV 60
           MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV
Sbjct: 1   MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVV 60

Query: 61  MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS 120
           MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS
Sbjct: 61  MVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKSFTVVQFS 120

Query: 121 PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT 180
           PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT
Sbjct: 121 PDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT 180

Query: 181 CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230
           CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL
Sbjct: 181 CEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230

[Close]
BLAST of IVF0012847 vs. NCBI nr
Match: XP_004147380.1 (RING-H2 finger protein ATL78 [Cucumis sativus] >KGN62136.1 hypothetical protein Csa_006555 [Cucumis sativus])

HSP 1 Score: 382 bits (981), Expect = 2.29e-132
Identity = 209/239 (87.45%), Postives = 214/239 (89.54%), Query Frame = 0 

Query: 1   MSIATISTNIH----HEVFRYSRKLLLHSSLHKLSFT---AAAPSAVHDQSEFYSGGDST 60
           MSIA+ISTN      H+VF YSRKLLLHSSLHKLSFT   AA PSAVHDQSEFYSGGDST
Sbjct: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60

Query: 61  TFDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKS 120
           TFDTNVVMVLSVLLCALICSLALNS+IRCALKCSR +VSNDHR    PTSTGVHKKAIKS
Sbjct: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRLTPTSTGVHKKAIKS 120

Query: 121 FTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180
           FTVVQFS DLNLPGLD ECVICLSEF TGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC
Sbjct: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180

Query: 181 RQCLVQTCEKIAGVI-ASASASSSS-GHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230
           RQCLVQTCEKIAGV  ASASASSSS GHSPSPPPPP   SVVV+LAPLEPEAPVRNLRL
Sbjct: 181 RQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPP---SVVVDLAPLEPEAPVRNLRL 236

[Close]
BLAST of IVF0012847 vs. NCBI nr
Match: XP_038901957.1 (RING-H2 finger protein ATL78-like [Benincasa hispida])

HSP 1 Score: 332 bits (851), Expect = 7.91e-113
Identity = 180/234 (76.92%), Postives = 195/234 (83.33%), Query Frame = 0 

Query: 1   MSIATISTNIHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDS--TTFDTN 60
           MS A+IST+ H+E F YSRKLLLH SLHKLSFTAAAPS +HDQSEFYSG  S  TTFDTN
Sbjct: 1   MSAASISTS-HYEEFHYSRKLLLHPSLHKLSFTAAAPSTLHDQSEFYSGSSSGDTTFDTN 60

Query: 61  VVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHP--APTSTGVHKKAIKSFTV 120
           VVMVLSVLLCALICSL LNS+IRCALKCSRF++S+D RR    AP STGVHKKAIKSFTV
Sbjct: 61  VVMVLSVLLCALICSLGLNSIIRCALKCSRFVISDDGRRSSSTAPASTGVHKKAIKSFTV 120

Query: 121 VQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQC 180
           VQFSP+LNLPGLDSECVICLS+F  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQC
Sbjct: 121 VQFSPNLNLPGLDSECVICLSDFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQC 180

Query: 181 LVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230
           LV TC+KIAGV A+AS S             PPP  VV +APL+ EAPVRNLRL
Sbjct: 181 LVHTCQKIAGV-ATASGS-------------PPPPAVVGIAPLDHEAPVRNLRL 219

[Close]
BLAST of IVF0012847 vs. NCBI nr
Match: XP_023007244.1 (RING-H2 finger protein ATL78-like [Cucurbita maxima])

HSP 1 Score: 288 bits (736), Expect = 2.25e-95
Identity = 157/227 (69.16%), Postives = 179/227 (78.85%), Query Frame = 0 

Query: 8   TNIH-HEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGD-STTFDTNVVMVLSV 67
           T+IH H+ F YSRKL          FTAAAPSA+H+  +  SGG   T+FDTNVVMVLSV
Sbjct: 6   TSIHGHQEFHYSRKL----------FTAAAPSALHNPLQSISGGGPDTSFDTNVVMVLSV 65

Query: 68  LLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTS--TGVHKKAIKSFTVVQFSPDL 127
           LLCALICSL LNS+IRCA KCSR +VS+DHR   A T+  TGVHKKAIKSFTVVQFSP+L
Sbjct: 66  LLCALICSLGLNSIIRCAFKCSRIVVSHDHRPPSATTAVPTGVHKKAIKSFTVVQFSPEL 125

Query: 128 NLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEK 187
           N PG+DSEC+ICLS+F  GDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTC+K
Sbjct: 126 NFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQK 185

Query: 188 IAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230
           IAGV  S S S+S G  PS PPPP     V+NL P++ E PVRNLR+
Sbjct: 186 IAGVGTSTSTSTS-GQPPSQPPPP-----VLNLTPVDHEGPVRNLRV 216

[Close]
BLAST of IVF0012847 vs. NCBI nr
Match: XP_023512393.1 (RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo] >XP_023522416.1 RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287 bits (734), Expect = 4.39e-95
Identity = 165/236 (69.92%), Postives = 184/236 (77.97%), Query Frame = 0 

Query: 1   MSIATISTNIHH--EVFRYSRKLLLHSSLHKLSFTAAAPSAV-HDQSEFYSGGDSTTFDT 60
           +SI++    IHH  +VF YSRKLLLHSSLH L+FTA APS+V H   E Y      TFDT
Sbjct: 4   VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDT 63

Query: 61  NVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTST---GVHKKAIKSF 120
           NVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D   HP+ T++   GVHKKAIKSF
Sbjct: 64  NVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDP--HPSSTTSAPVGVHKKAIKSF 123

Query: 121 TVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
           T+VQFSPDLNLPGLDSECVICLS+FV G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR
Sbjct: 124 TMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 183

Query: 181 QCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230
           QCLVQT +KIAGV   AS              PPPP++  NL PL+PEA VRNL L
Sbjct: 184 QCLVQTSQKIAGVSGPAS--------------PPPPAI--NLTPLDPEARVRNLWL 215

[Close]
BLAST of IVF0012847 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 211.1 bits (536), Expect = 9.6e-55
Identity = 123/234 (52.56%), Postives = 155/234 (66.24%), Query Frame = 0 

Query: 1   MSIATIS-TNIHHEVF--RYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSGGDSTTFDT 60
           +SI+TI  T I  E+    YSRKLL H+  H  S T A    V D +          FD 
Sbjct: 7   ISISTIKPTEIFQEILGSSYSRKLLFHT--HDQSPTPAPSPYVGDNN----------FDA 66

Query: 61  NVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSN-DHRRHPAP-TSTGVHKKAIKSFT 120
           NVVMVLSVLLCAL+CSL LNS+IRCAL+CS  + S      +P   T+TGV +KA+KSF 
Sbjct: 67  NVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQ 126

Query: 121 VVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQ 180
            V +S +LNLPGLD+EC ICLSEFV  ++++LLP C+HGFHV+CIDKWLSSHSSCP CR 
Sbjct: 127 TVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRH 186

Query: 181 CLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLR 230
           CL+QTCEKIA    ++S +S+          PP  S+++ +APLEPE  +R  R
Sbjct: 187 CLIQTCEKIADCSQTSSLNSTQ---------PPQDSIILQIAPLEPERWIRWFR 219

[Close]
BLAST of IVF0012847 vs. TAIR 10
Match: AT1G49210.1 (RING/U-box superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-46
Identity = 102/218 (46.79%), Postives = 136/218 (62.39%), Query Frame = 0 

Query: 18  SRKLLLHSSL--HKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICSLA 77
           +RKLLLH     + L   A APS +        G        NV+M+LSVL+C +IC L 
Sbjct: 23  TRKLLLHDPFDHNSLRVFAVAPSPLITHENNLKG--------NVLMLLSVLICGIICCLG 82

Query: 78  LNSVIRCAL-KCSRFLVSNDHRRHPAPTST---GVHKKAIKSFTVVQFSPDLNLPGLDSE 137
           L+ +IRCA  + SRF++S        P S+   G+ KKA++ F VV +S ++NLPG+  E
Sbjct: 83  LHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEE 142

Query: 138 CVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVIASA 197
           CVICLS+FV+G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TC+KI G  + A
Sbjct: 143 CVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFSQA 202

Query: 198 SASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLR 230
            + +S+          P  SV+V + PLEPE  V   R
Sbjct: 203 DSMAST----------PTESVIVRIDPLEPEGRVNTFR 222

[Close]
BLAST of IVF0012847 vs. TAIR 10
Match: AT1G49200.1 (RING/U-box superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 6.2e-46
Identity = 101/218 (46.33%), Postives = 139/218 (63.76%), Query Frame = 0 

Query: 18  SRKLLLHSSL--HKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICSLA 77
           SRKLLLH+    +     A APS +       SG        NV+M+LSVL+C +IC L 
Sbjct: 24  SRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSG--------NVLMLLSVLICGIICCLG 83

Query: 78  LNSVIRCAL-KCSRFLVSNDHRRHPAP---TSTGVHKKAIKSFTVVQFSPDLNLPGLDSE 137
           L+ +IRCA  + S F++S        P   ++ G++KKA++ F VV +SP++NLPGL  E
Sbjct: 84  LHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEE 143

Query: 138 CVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVIASA 197
           CVICLS+FV+G+++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+TC+KI G  + A
Sbjct: 144 CVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQA 203

Query: 198 SASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLR 230
              +++          P  SV+V +APLEPE  V  LR
Sbjct: 204 DQVAAT----------PTASVIVRIAPLEPEGRVNILR 223

[Close]
BLAST of IVF0012847 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 6.9e-45
Identity = 108/239 (45.19%), Postives = 144/239 (60.25%), Query Frame = 0 

Query: 18  SRKLLLHSSL--HKLSFTAAAPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICSLA 77
           SRKLLLH+    +     A APS +       SG        NV+M+LS+L+C +IC L 
Sbjct: 23  SRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSG--------NVMMLLSILICGIICCLG 82

Query: 78  LNSVIRCALKCS-RFLVSNDHRRHPAP--------TSTGVHKKAIKSFTVVQFSPDLNLP 137
           L+ +IRCAL+ S RF++S      P P        ++ G+ KKA++ F VV +SP++NLP
Sbjct: 83  LHYIIRCALRRSTRFMIS-----EPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLP 142

Query: 138 GLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAG 197
           GLD ECVICLS+FV+G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TC+KI G
Sbjct: 143 GLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILG 202

Query: 198 VIASASASSSSGHS-------PSPP---------PPPPPPSVVVNLAPLEPEAPVRNLR 230
             + A + ++           P  P         P  P   V+V +APLEPE  V  +R
Sbjct: 203 DFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLEPTEIVIVMIAPLEPEGRVNTIR 248

[Close]
BLAST of IVF0012847 vs. TAIR 10
Match: AT3G18773.1 (RING/U-box superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 4.2e-42
Identity = 84/184 (45.65%), Postives = 118/184 (64.13%), Query Frame = 0 

Query: 51  DSTTFDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHP-----APTSTG 110
           D      NV+M+LS+LLC +ICSL L+ +IRCA   SR  + +D    P     +  + G
Sbjct: 44  DKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKG 103

Query: 111 VHKKAIKSFTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLS 170
           + KKA+K   VV +SP++NLPG+  ECVICLS+FV G++LR+LPKCNHGFH++CIDKWL+
Sbjct: 104 IKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLT 163

Query: 171 SHSSCPKCRQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPV 230
            H +CPKCR CLV TC+K+     +A   +++             S+ + ++PLEPEA V
Sbjct: 164 QHMTCPKCRHCLVDTCQKVLSDCDAADQVAATA----------TESIDIRISPLEPEARV 217

The following BLAST results are available for this feature:
BLAST of IVF0012847 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6NQG71.4e-5352.56RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1[more]
Q6NML03.0e-4546.79E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 ... [more]
Q94BY68.8e-4546.33RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1[more]
P0C0349.7e-4445.19RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1[more]
Q9LS995.9e-4145.65RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1[more]
BLAST of IVF0012847 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TCX21.2e-124100.00RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CDJ31.2e-124100.00RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499651 PE=3 ... [more]
A0A0A0LQ735.6e-10386.50RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G301540 PE... [more]
A0A6J1L4E92.2e-7566.81RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499787 P... [more]
A0A6J1EJK61.1e-7469.92RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434900... [more]
BLAST of IVF0012847 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460910.16.80e-160100.00PREDICTED: RING-H2 finger protein ATL78-like [Cucumis melo] >KAA0040778.1 RING-H... [more]
XP_004147380.12.29e-13287.45RING-H2 finger protein ATL78 [Cucumis sativus] >KGN62136.1 hypothetical protein ... [more]
XP_038901957.17.91e-11376.92RING-H2 finger protein ATL78-like [Benincasa hispida][more]
XP_023007244.12.25e-9569.16RING-H2 finger protein ATL78-like [Cucurbita maxima][more]
XP_023512393.14.39e-9569.92RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo] >XP_023522416.1 R... [more]
BLAST of IVF0012847 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G49230.19.6e-5552.56RING/U-box superfamily protein [more]
AT1G49210.12.1e-4646.79RING/U-box superfamily protein [more]
AT1G49200.16.2e-4646.33RING/U-box superfamily protein [more]
AT1G49220.16.9e-4545.19RING/U-box superfamily protein [more]
AT3G18773.14.2e-4245.65RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 132..173
e-value: 3.7E-7
score: 39.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 131..174
e-value: 3.2E-14
score: 53.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 132..174
score: 12.282736
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 91..179
e-value: 1.3E-21
score: 78.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..215
NoneNo IPR availablePANTHERPTHR46905:SF7RING-H2 FINGER PROTEIN ATL78coord: 8..229
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 110..179
IPR044602RING-H2 finger protein ATL10/ATL75-79PANTHERPTHR46905RING-H2 FINGER PROTEIN ATL78coord: 8..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0012847.2IVF0012847.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016740 transferase activity