IVF0012749 (gene) Melon (IVF77) v1

Overview


Name	IVF0012749
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr05: 26433143 .. 26434774 (-)
RNA-Seq Expression	IVF0012749
Synteny	IVF0012749

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCCCCTCTAAGATAACAAAAACTGAACAGCAATGTCTTTCTCCATTCATTCTCATGCCACGGTAAACTCCATCGCTACTACCAATTTCAAATCTCTAATAATTCCAATTCATTTTCCGGCCGTCAAATCCTTTCGATCGACGCCCTTGTCCACCAATGCCCTCTCCAATTCCCGTTTTCGGAAGGCTGCCCGCCAGTACGACGCCCAAAGCACCACGAACACTCTCTCCGAATCTCAGAACCAAACCAGCGATTCTGTCTATAGTTTTCCATCGACGGTGGATTTACTGGCTCTATGCGAGGAGGGTAAGGTAATTGACGCTCTGGAATACATTGGCCAAGGTGCTAAAGTCGACTATGGCGTTTTTACTGCTTTGTTGAATTCTTGTTGTAATTTGAAGTTGCTCGAGGCTGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGAGATGTGGAATTGAACAATAAGTTGATTGAGATGTATTCGAATTGTGGCTGTATGAAAAATGCACGTAAGGTGTTTGATAAAATGCCTAACAAGGATACTAGGACTTGGAATTTGATGATCAAAGGGTATGGAGAGAATGGGGAAGGGGATAATGGGTTGGCATTGTTTGAGAAAATGAAGAATGTTGGTTTGCAACCAAATTCAGAAACATTTCTGGTGATCTTAGCTGCTTGTGCCATGGCTGAAGCTGTGGAGGAAGGTGTATTTTACTTCAACATAATGGGAAATGAATATGGAATCGATCCTGAAATTGAACATTATTTGGGAGTTATTGATGTTCTTGGAAAATCTGGTCATTTGATTGAAGCTGAGGAGTTCATTGAGAAAATGCCCATCAATCCCACAGCCAAAATTTGGGATGCCCTTAGAAACTACGCTCGACTCCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCACAACGGCCACGACTACCAAACCATCACTCCCTCCACGGAGGAAGCAATCGAGCACGAACATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGGAGTGCAATGCCTTATAAAGAAGAGGGTGAAGGGAAGCTGAAAGGATTGAATGGACAAATGAAAGAAGCAGGGTACGTTCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGGCTTGCTATTGCTTATGGATTGATCAGTACACCGGCAAGAACGACATTGAGGATCATCAAGAATCTTCGAATTTGCGGCGATTGTCATAATGCAATCAAGATCATGTCAAAGATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGACGGCAAATGCTCTTGTGGGGATTACTGGTAAACACATCAACTGTATTATTACACGTTGATTTTCTGTCCACTTTGGTGATTTACTTGATTGATTTTCCTTTTTTCTTCCCCTTGGTTTTTCTTTTATGATAGAAACAAAGGTGAAGATTAGAAAATTAATTAAAGTGTACATTGAAAGATGAAGATTCATAGTGAAAATAAATAACTAGATTTTGAGTATTCTTTGGGTTCCAAACCAATATGTCAATACAAG

mRNA sequence

TATCCCCTCTAAGATAACAAAAACTGAACAGCAATGTCTTTCTCCATTCATTCTCATGCCACGGTAAACTCCATCGCTACTACCAATTTCAAATCTCTAATAATTCCAATTCATTTTCCGGCCGTCAAATCCTTTCGATCGACGCCCTTGTCCACCAATGCCCTCTCCAATTCCCGTTTTCGGAAGGCTGCCCGCCAGTACGACGCCCAAAGCACCACGAACACTCTCTCCGAATCTCAGAACCAAACCAGCGATTCTGTCTATAGTTTTCCATCGACGGTGGATTTACTGGCTCTATGCGAGGAGGGTAAGGTAATTGACGCTCTGGAATACATTGGCCAAGGTGCTAAAGTCGACTATGGCGTTTTTACTGCTTTGTTGAATTCTTGTTGTAATTTGAAGTTGCTCGAGGCTGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGAGATGTGGAATTGAACAATAAGTTGATTGAGATGTATTCGAATTGTGGCTGTATGAAAAATGCACGTAAGGTGTTTGATAAAATGCCTAACAAGGATACTAGGACTTGGAATTTGATGATCAAAGGGTATGGAGAGAATGGGGAAGGGGATAATGGGTTGGCATTGTTTGAGAAAATGAAGAATGTTGGTTTGCAACCAAATTCAGAAACATTTCTGGTGATCTTAGCTGCTTGTGCCATGGCTGAAGCTGTGGAGGAAGGTGTATTTTACTTCAACATAATGGGAAATGAATATGGAATCGATCCTGAAATTGAACATTATTTGGGAGTTATTGATGTTCTTGGAAAATCTGGTCATTTGATTGAAGCTGAGGAGTTCATTGAGAAAATGCCCATCAATCCCACAGCCAAAATTTGGGATGCCCTTAGAAACTACGCTCGACTCCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCACAACGGCCACGACTACCAAACCATCACTCCCTCCACGGAGGAAGCAATCGAGCACGAACATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGGAGTGCAATGCCTTATAAAGAAGAGGGTGAAGGGAAGCTGAAAGGATTGAATGGACAAATGAAAGAAGCAGGGTACGTTCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGGCTTGCTATTGCTTATGGATTGATCAGTACACCGGCAAGAACGACATTGAGGATCATCAAGAATCTTCGAATTTGCGGCGATTGTCATAATGCAATCAAGATCATGTCAAAGATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGACGGCAAATGCTCTTGTGGGGATTACTGGTAAACACATCAACTGTATTATTACACGTTGATTTTCTGTCCACTTTGGTGATTTACTTGATTGATTTTCCTTTTTTCTTCCCCTTGGTTTTTCTTTTATGATAGAAACAAAGGTGAAGATTAGAAAATTAATTAAAGTGTACATTGAAAGATGAAGATTCATAGTGAAAATAAATAACTAGATTTTGAGTATTCTTTGGGTTCCAAACCAATATGTCAATACAAG

Coding sequence (CDS)

ATGTCTTTCTCCATTCATTCTCATGCCACGGTAAACTCCATCGCTACTACCAATTTCAAATCTCTAATAATTCCAATTCATTTTCCGGCCGTCAAATCCTTTCGATCGACGCCCTTGTCCACCAATGCCCTCTCCAATTCCCGTTTTCGGAAGGCTGCCCGCCAGTACGACGCCCAAAGCACCACGAACACTCTCTCCGAATCTCAGAACCAAACCAGCGATTCTGTCTATAGTTTTCCATCGACGGTGGATTTACTGGCTCTATGCGAGGAGGGTAAGGTAATTGACGCTCTGGAATACATTGGCCAAGGTGCTAAAGTCGACTATGGCGTTTTTACTGCTTTGTTGAATTCTTGTTGTAATTTGAAGTTGCTCGAGGCTGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGAGATGTGGAATTGAACAATAAGTTGATTGAGATGTATTCGAATTGTGGCTGTATGAAAAATGCACGTAAGGTGTTTGATAAAATGCCTAACAAGGATACTAGGACTTGGAATTTGATGATCAAAGGGTATGGAGAGAATGGGGAAGGGGATAATGGGTTGGCATTGTTTGAGAAAATGAAGAATGTTGGTTTGCAACCAAATTCAGAAACATTTCTGGTGATCTTAGCTGCTTGTGCCATGGCTGAAGCTGTGGAGGAAGGTGTATTTTACTTCAACATAATGGGAAATGAATATGGAATCGATCCTGAAATTGAACATTATTTGGGAGTTATTGATGTTCTTGGAAAATCTGGTCATTTGATTGAAGCTGAGGAGTTCATTGAGAAAATGCCCATCAATCCCACAGCCAAAATTTGGGATGCCCTTAGAAACTACGCTCGACTCCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCACAACGGCCACGACTACCAAACCATCACTCCCTCCACGGAGGAAGCAATCGAGCACGAACATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGGAGTGCAATGCCTTATAAAGAAGAGGGTGAAGGGAAGCTGAAAGGATTGAATGGACAAATGAAAGAAGCAGGGTACGTTCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGGCTTGCTATTGCTTATGGATTGATCAGTACACCGGCAAGAACGACATTGAGGATCATCAAGAATCTTCGAATTTGCGGCGATTGTCATAATGCAATCAAGATCATGTCAAAGATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGACGGCAAATGCTCTTGTGGGGATTACTGGTAA

Protein sequence

MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQSTTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNGQMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW

Homology

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BLAST of IVF0012749 vs. ExPASy Swiss-Prot
Match: Q9ZQE5 (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2)

HSP 1 Score: 420.2 bits (1079), Expect = 2.9e-116
Identity = 214/414 (51.69%), Postives = 274/414 (66.18%), Query Frame = 0


Query: 45  SNSRFRKAARQYDAQSTTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQG 104
           SN       +Q        + ++S NQ ++ V   PS  +++ LC+     DA+E + +G
Sbjct: 173 SNQSQYYTPQQQQQPQPPRSSNQSPNQMNE-VAPPPSVEEVMRLCQRRLYKDAIELLDKG 232

Query: 105 AKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNAR 164
           A  D   F  L  SC NLK LE  ++V      +KFRGD +LNN +I M+  C  + +A+
Sbjct: 233 AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAK 292

Query: 165 KVFDKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAE 224
           +VFD M +KD  +W+LM+  Y +NG GD+ L LFE+M   GL+PN ETFL +  ACA   
Sbjct: 293 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 352

Query: 225 AVEEGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDAL 284
            +EE   +F+ M NE+GI P+ EHYLGV+ VLGK GHL+EAE++I  +P  PTA  W+A+
Sbjct: 353 GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 412

Query: 285 RNYARLHGNMELEDRAEELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSA 344
           RNYARLHG+++LED  EELM  +DPS  A   K   PP +    TNM+  K R+ EFR+ 
Sbjct: 413 RNYARLHGDIDLEDYMEELMVDVDPS-KAVINKIPTPPPKSFKETNMVTSKSRILEFRNL 472

Query: 345 MPYKEEGEGKLKGLNGQMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTP 404
             YK+E +          K   YVPDTR+VLHDID+EAK+QAL YHSERLAIAYG+I TP
Sbjct: 473 TFYKDEAKEM-----AAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTP 532

Query: 405 ARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
            R TL IIKNLR+CGDCHN IKIMSKI+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 533 PRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of IVF0012749 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-77
Identity = 172/482 (35.68%), Postives = 257/482 (53.32%), Query Frame = 0


Query: 5   IHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQSTTNT 64
           + S   V+ +  +    LI  IH   +K   S  LS  ++S +     ++  + +S    
Sbjct: 320 LRSSTLVSLVPVSGHLMLIYAIHGYCLK---SNFLSHASVSTALTTVYSKLNEIESARKL 379

Query: 65  LSESQNQTSDSVYSFPSTVDLLA-LCEEGKVIDALEYIGQGAKVDYG----VFTALLNSC 124
             ES  +      S PS   +++   + G   DA+    +  K ++       T +L++C
Sbjct: 380 FDESPEK------SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 439

Query: 125 CNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWN 184
             L  L  G+ V  L++ T F   + ++  LI MY+ CG +  AR++FD M  K+  TWN
Sbjct: 440 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 499

Query: 185 LMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNE 244
            MI GYG +G+G   L +F +M N G+ P   TFL +L AC+ A  V+EG   FN M + 
Sbjct: 500 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 559

Query: 245 YGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDR 304
           YG +P ++HY  ++D+LG++GHL  A +FIE M I P + +W+ L    R+H +  L   
Sbjct: 560 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 619

Query: 305 AEELMFSLDPSTT------------------ATTTKPSLPPRR--KQSSTNMLEEKDRVR 364
             E +F LDP                     A T + +   R+  K     ++E  +   
Sbjct: 620 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 679

Query: 365 EFRS---AMPYKEEGEGKLKGLNGQMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAI 424
            F S   + P  +E   KL+ L G+M+EAGY P+T   LHD++EE ++  ++ HSERLAI
Sbjct: 680 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 739

Query: 425 AYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGD 459
           A+GLI+T   T +RIIKNLR+C DCH   K++SKI  R ++VRD  RFHHFKDG CSCGD
Sbjct: 740 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 792

[Close]

BLAST of IVF0012749 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.9e-76
Identity = 156/396 (39.39%), Postives = 231/396 (58.33%), Query Frame = 0


Query: 90  EEGKVIDALEYIGQ--GAKVDYG--VFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVE 149
           + G+  +AL    Q   AKV  G   F++++ +C +L  L  G+++ G +    F  ++ 
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 150 LNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVG 209
           + + L++MYS CG +K ARK+FD+M   D  +W  +I G+  +G G   ++LFE+MK  G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439

Query: 210 LQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEA 269
           ++PN   F+ +L AC+    V+E   YFN M   YG++ E+EHY  V D+LG++G L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499

Query: 270 EEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTAT----------- 329
             FI KM + PT  +W  L +   +H N+EL ++  E +F++D                 
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559

Query: 330 -----TTKPSLPPR----RKQSSTNMLEEKDRVREFRS---AMPYKEEGEGKLKGLNGQM 389
                  K  L  R    RK+ + + +E K++   F S   + P  ++    LK +  QM
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619

Query: 390 KEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCH 449
           ++ GYV DT  VLHD+DEE K++ L  HSERLA+A+G+I+T   TT+R+ KN+RIC DCH
Sbjct: 620 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 679

Query: 450 NAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
            AIK +SKI  RE+IVRDN RFHHF  G CSCGDYW
Sbjct: 680 VAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

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BLAST of IVF0012749 vs. ExPASy Swiss-Prot
Match: Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.3e-75
Identity = 151/374 (40.37%), Postives = 225/374 (60.16%), Query Frame = 0


Query: 108 DYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVF 167
           DY  F+++++ C N  LLE GR++ GL   + F     + + L+ +YS CG  + A +VF
Sbjct: 217 DYS-FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 276

Query: 168 DKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVE 227
           +++P K+   WN M+K Y ++      + LF++MK  G++PN  TFL +L AC+ A  V+
Sbjct: 277 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 336

Query: 228 EGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNY 287
           EG +YF+ M  E  I+P  +HY  ++D+LG++G L EA E I  MPI+PT  +W AL   
Sbjct: 337 EGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 396

Query: 288 ARLHGNMELEDRAEELMFSLDPSTT------------------ATTTKPSLPPR--RKQS 347
             +H N EL   A + +F L P ++                  A   +  L  R  +K++
Sbjct: 397 CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKET 456

Query: 348 STNMLEEKDRVREFRSAMPYKEEGE---GKLKGLNGQMKEAGYVPDTRYVLHDIDEEAKQ 407
             + +EE+++V  F +     E+ +    KL  L  +M++AGY+ DT YVL ++D + K 
Sbjct: 457 GLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 516

Query: 408 QALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 459
           Q ++YHSERLAIA+GLI+ PA   +R++KNLR+CGDCHNAIK MS    R +IVRDN RF
Sbjct: 517 QTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRF 576

[Close]

BLAST of IVF0012749 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 9.5e-75
Identity = 144/379 (37.99%), Postives = 223/379 (58.84%), Query Frame = 0


Query: 103 QGAKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKN 162
           +G +++   F++ L++C ++  LE G+++ G L    +     + N L+ MY  CG ++ 
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 163 ARKVFDKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAM 222
           A  +F +M  KD  +WN MI GY  +G G+  L  FE MK  GL+P+  T + +L+AC+ 
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 223 AEAVEEGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWD 282
              V++G  YF  M  +YG+ P  +HY  ++D+LG++G L +A   ++ MP  P A IW 
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 283 ALRNYARLHGNMELEDRAEELMFSLDPSTTATTTKPS--------------LPPR----- 342
            L   +R+HGN EL + A + +F+++P  +      S              L  R     
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 343 -RKQSSTNMLEEKDRVREFR---SAMPYKEEGEGKLKGLNGQMKEAGYVPDTRYVLHDID 402
            +K    + +E +++   F       P K+E    L+ L+ +MK+AGYV  T  VLHD++
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 403 EEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 459
           EE K++ ++YHSERLA+AYG++   +   +R+IKNLR+C DCHNAIK M++I GR +I+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

[Close]

BLAST of IVF0012749 vs. ExPASy TrEMBL
Match: A0A5D3CFT5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00860 PE=3 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 9.7e-264
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS
Sbjct: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. ExPASy TrEMBL
Match: A0A1S3C9A6 (pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=3656 GN=LOC103498440 PE=3 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 8.2e-263
Identity = 457/458 (99.78%), Postives = 457/458 (99.78%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MS SIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. ExPASy TrEMBL
Match: A0A5A7V2K9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00600 PE=3 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 4.5e-261
Identity = 452/458 (98.69%), Postives = 457/458 (99.78%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MS SIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLSESQNQTSDSVYSFPSTVDLLALC+EGKVIDALEYIGQGAKVDYGVFTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCKEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYGENGEGDNGLALFE+MKNVGLQPNSETFLV+LAACAMAEAVEEGVFYFNIMGNEY
Sbjct: 181 MIKGYGENGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. ExPASy TrEMBL
Match: A0A0A0LEV9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000530 PE=3 SV=1)

HSP 1 Score: 856.7 bits (2212), Expect = 4.5e-245
Identity = 423/458 (92.36%), Postives = 441/458 (96.29%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MS SI SHATVNS ATTNFKS I+P HFP +KSFRST LSTNALSNSRFRK+A QYDAQS
Sbjct: 1   MSSSIPSHATVNSTATTNFKSRILPFHFPVLKSFRSTLLSTNALSNSRFRKSAHQYDAQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLS+SQN+TSDSVYS PSTVDLLALCEEGKVID LEYIGQGAKVDYGVFTALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVYSLPSTVDLLALCEEGKVIDVLEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD+ELNN+LIEMYSNCGCMK+ARKVFDKM NKDT +WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYG+NGEGDNGLALFE+MKN GLQPNSETFLV+LAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGDNGEGDNGLALFEQMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPSTT+TT KPSLPPRRKQSSTNMLEEKDRVREFR AMPYKEEGEG+LKGLNG
Sbjct: 301 EELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. ExPASy TrEMBL
Match: A0A6J1FC52 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444273 PE=3 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 1.8e-217
Identity = 384/459 (83.66%), Postives = 411/459 (89.54%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           M+ SI S  T NSI TTNF S IIP H PAVKSFR T    N+LSNS  RK AR+YD Q+
Sbjct: 1   MASSIPSQTTPNSIITTNFTSRIIPFHSPAVKSFRPTLFCPNSLSNSSNRKPARRYDGQT 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLS+SQN+TSDSV S PSTVDL+ALCE G+V+D LE+IGQGA +DYG+ TALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           N KLLEAGRRVD LLKGTKF GDV LNN LIEMYS CGCMK+AR+VFDKMP++D RTWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNNLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYGENGEGD GLALFE+MK+VGLQPNSETFLV+LAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI PEIEHYLGV+DVLGKSGHLIEAEEFI+K+PINPTAKIWDALR YARLHGN+ELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGE-GKLKGLN 360
           EEL+FS DPS   T  KP L P RKQS+TNMLEEKDRVREFR AMPYKEEGE GKLKGLN
Sbjct: 301 EELIFSYDPSMAPTAAKPPLLPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459

[Close]

BLAST of IVF0012749 vs. NCBI nr
Match: TYK10773.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 914 bits (2363), Expect = 0.0
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS
Sbjct: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. NCBI nr
Match: XP_008459269.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis melo])

HSP 1 Score: 911 bits (2355), Expect = 0.0
Identity = 457/458 (99.78%), Postives = 457/458 (99.78%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MS SIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. NCBI nr
Match: KAA0061500.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 905 bits (2340), Expect = 0.0
Identity = 452/458 (98.69%), Postives = 457/458 (99.78%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MS SIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLSESQNQTSDSVYSFPSTVDLLALC+EGKVIDALEYIGQGAKVDYGVFTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCKEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYGENGEGDNGLALFE+MKNVGLQPNSETFLV+LAACAMAEAVEEGVFYFNIMGNEY
Sbjct: 181 MIKGYGENGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. NCBI nr
Match: XP_004141167.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Cucumis sativus])

HSP 1 Score: 852 bits (2202), Expect = 7.09e-311
Identity = 423/458 (92.36%), Postives = 441/458 (96.29%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MS SI SHATVNS ATTNFKS I+P HFP +KSFRST LSTNALSNSRFRK+A QYDAQS
Sbjct: 1   MSSSIPSHATVNSTATTNFKSRILPFHFPVLKSFRSTLLSTNALSNSRFRKSAHQYDAQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           TTNTLS+SQN+TSDSVYS PSTVDLLALCEEGKVID LEYIGQGAKVDYGVFTALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVYSLPSTVDLLALCEEGKVIDVLEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD+ELNN+LIEMYSNCGCMK+ARKVFDKM NKDT +WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYG+NGEGDNGLALFE+MKN GLQPNSETFLV+LAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGDNGEGDNGLALFEQMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPSTT+TT KPSLPPRRKQSSTNMLEEKDRVREFR AMPYKEEGEG+LKGLNG
Sbjct: 301 EELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. NCBI nr
Match: XP_038889181.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 827 bits (2136), Expect = 8.07e-301
Identity = 409/458 (89.30%), Postives = 430/458 (93.89%), Query Frame = 0


Query: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60
           MS SI  HA  NS+ T NFKS  +PIHFP  KSFRSTPL TNALSNSRFRKA RQYD QS
Sbjct: 1   MSSSIPPHAAGNSVITANFKSRSLPIHFPTAKSFRSTPLCTNALSNSRFRKAVRQYDDQS 60

Query: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120
           T NTLS+SQNQTSDSVYS PSTVDL+ALCEEGKVIDALEYIGQGA VDYGVFTALLNSCC
Sbjct: 61  TANTLSKSQNQTSDSVYSLPSTVDLMALCEEGKVIDALEYIGQGANVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180
           NLKLLEAGRRV+G+LKGT FRGDVELNNKLIE+YS CGCMK+ARKVFDKMP++DTRTWNL
Sbjct: 121 NLKLLEAGRRVNGVLKGTNFRGDVELNNKLIEVYSTCGCMKDARKVFDKMPDRDTRTWNL 180

Query: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240
           MIKGYG+NGEGD+GLALFE+MKNVGLQPN ETFLV+LAACA+AEAVEEG+FYFNIM NEY
Sbjct: 181 MIKGYGDNGEGDDGLALFEQMKNVGLQPNPETFLVVLAACAIAEAVEEGLFYFNIMENEY 240

Query: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI PEIEHYLGV+DVLGK GHLIEAEEFIEKMPINPTAK+WDALRNYARLHGNMELEDRA
Sbjct: 241 GISPEIEHYLGVVDVLGKFGHLIEAEEFIEKMPINPTAKLWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360
           EELMFSLDPST ATT KP LPPRRK SSTNMLEEKDRVREFR AMPYKE+GEGKLKGLNG
Sbjct: 301 EELMFSLDPSTMATTIKPPLPPRRKDSSTNMLEEKDRVREFRCAMPYKEKGEGKLKGLNG 360

Query: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           Q++EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QIREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of IVF0012749 vs. TAIR 10
Match: AT2G15690.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 420.2 bits (1079), Expect = 2.1e-117
Identity = 214/414 (51.69%), Postives = 274/414 (66.18%), Query Frame = 0


Query: 45  SNSRFRKAARQYDAQSTTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQG 104
           SN       +Q        + ++S NQ ++ V   PS  +++ LC+     DA+E + +G
Sbjct: 173 SNQSQYYTPQQQQQPQPPRSSNQSPNQMNE-VAPPPSVEEVMRLCQRRLYKDAIELLDKG 232

Query: 105 AKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNAR 164
           A  D   F  L  SC NLK LE  ++V      +KFRGD +LNN +I M+  C  + +A+
Sbjct: 233 AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAK 292

Query: 165 KVFDKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAE 224
           +VFD M +KD  +W+LM+  Y +NG GD+ L LFE+M   GL+PN ETFL +  ACA   
Sbjct: 293 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 352

Query: 225 AVEEGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDAL 284
            +EE   +F+ M NE+GI P+ EHYLGV+ VLGK GHL+EAE++I  +P  PTA  W+A+
Sbjct: 353 GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 412

Query: 285 RNYARLHGNMELEDRAEELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSA 344
           RNYARLHG+++LED  EELM  +DPS  A   K   PP +    TNM+  K R+ EFR+ 
Sbjct: 413 RNYARLHGDIDLEDYMEELMVDVDPS-KAVINKIPTPPPKSFKETNMVTSKSRILEFRNL 472

Query: 345 MPYKEEGEGKLKGLNGQMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTP 404
             YK+E +          K   YVPDTR+VLHDID+EAK+QAL YHSERLAIAYG+I TP
Sbjct: 473 TFYKDEAKEM-----AAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTP 532

Query: 405 ARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
            R TL IIKNLR+CGDCHN IKIMSKI+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 533 PRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of IVF0012749 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-78
Identity = 172/482 (35.68%), Postives = 257/482 (53.32%), Query Frame = 0


Query: 5   IHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQSTTNT 64
           + S   V+ +  +    LI  IH   +K   S  LS  ++S +     ++  + +S    
Sbjct: 320 LRSSTLVSLVPVSGHLMLIYAIHGYCLK---SNFLSHASVSTALTTVYSKLNEIESARKL 379

Query: 65  LSESQNQTSDSVYSFPSTVDLLA-LCEEGKVIDALEYIGQGAKVDYG----VFTALLNSC 124
             ES  +      S PS   +++   + G   DA+    +  K ++       T +L++C
Sbjct: 380 FDESPEK------SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 439

Query: 125 CNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWN 184
             L  L  G+ V  L++ T F   + ++  LI MY+ CG +  AR++FD M  K+  TWN
Sbjct: 440 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 499

Query: 185 LMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNE 244
            MI GYG +G+G   L +F +M N G+ P   TFL +L AC+ A  V+EG   FN M + 
Sbjct: 500 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 559

Query: 245 YGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDR 304
           YG +P ++HY  ++D+LG++GHL  A +FIE M I P + +W+ L    R+H +  L   
Sbjct: 560 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 619

Query: 305 AEELMFSLDPSTT------------------ATTTKPSLPPRR--KQSSTNMLEEKDRVR 364
             E +F LDP                     A T + +   R+  K     ++E  +   
Sbjct: 620 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 679

Query: 365 EFRS---AMPYKEEGEGKLKGLNGQMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAI 424
            F S   + P  +E   KL+ L G+M+EAGY P+T   LHD++EE ++  ++ HSERLAI
Sbjct: 680 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 739

Query: 425 AYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGD 459
           A+GLI+T   T +RIIKNLR+C DCH   K++SKI  R ++VRD  RFHHFKDG CSCGD
Sbjct: 740 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 792

[Close]

BLAST of IVF0012749 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 287.0 bits (733), Expect = 2.7e-77
Identity = 156/396 (39.39%), Postives = 231/396 (58.33%), Query Frame = 0


Query: 90  EEGKVIDALEYIGQ--GAKVDYG--VFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVE 149
           + G+  +AL    Q   AKV  G   F++++ +C +L  L  G+++ G +    F  ++ 
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 150 LNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVG 209
           + + L++MYS CG +K ARK+FD+M   D  +W  +I G+  +G G   ++LFE+MK  G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439

Query: 210 LQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEA 269
           ++PN   F+ +L AC+    V+E   YFN M   YG++ E+EHY  V D+LG++G L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499

Query: 270 EEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTAT----------- 329
             FI KM + PT  +W  L +   +H N+EL ++  E +F++D                 
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559

Query: 330 -----TTKPSLPPR----RKQSSTNMLEEKDRVREFRS---AMPYKEEGEGKLKGLNGQM 389
                  K  L  R    RK+ + + +E K++   F S   + P  ++    LK +  QM
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619

Query: 390 KEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCH 449
           ++ GYV DT  VLHD+DEE K++ L  HSERLA+A+G+I+T   TT+R+ KN+RIC DCH
Sbjct: 620 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 679

Query: 450 NAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
            AIK +SKI  RE+IVRDN RFHHF  G CSCGDYW
Sbjct: 680 VAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]

BLAST of IVF0012749 vs. TAIR 10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1 )

HSP 1 Score: 283.9 bits (725), Expect = 2.3e-76
Identity = 151/374 (40.37%), Postives = 225/374 (60.16%), Query Frame = 0


Query: 108 DYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVF 167
           DY  F+++++ C N  LLE GR++ GL   + F     + + L+ +YS CG  + A +VF
Sbjct: 217 DYS-FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 276

Query: 168 DKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVE 227
           +++P K+   WN M+K Y ++      + LF++MK  G++PN  TFL +L AC+ A  V+
Sbjct: 277 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 336

Query: 228 EGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNY 287
           EG +YF+ M  E  I+P  +HY  ++D+LG++G L EA E I  MPI+PT  +W AL   
Sbjct: 337 EGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 396

Query: 288 ARLHGNMELEDRAEELMFSLDPSTT------------------ATTTKPSLPPR--RKQS 347
             +H N EL   A + +F L P ++                  A   +  L  R  +K++
Sbjct: 397 CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKET 456

Query: 348 STNMLEEKDRVREFRSAMPYKEEGE---GKLKGLNGQMKEAGYVPDTRYVLHDIDEEAKQ 407
             + +EE+++V  F +     E+ +    KL  L  +M++AGY+ DT YVL ++D + K 
Sbjct: 457 GLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 516

Query: 408 QALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 459
           Q ++YHSERLAIA+GLI+ PA   +R++KNLR+CGDCHNAIK MS    R +IVRDN RF
Sbjct: 517 QTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRF 576

[Close]

BLAST of IVF0012749 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 6.8e-76
Identity = 144/379 (37.99%), Postives = 223/379 (58.84%), Query Frame = 0


Query: 103 QGAKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKN 162
           +G +++   F++ L++C ++  LE G+++ G L    +     + N L+ MY  CG ++ 
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 163 ARKVFDKMPNKDTRTWNLMIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAM 222
           A  +F +M  KD  +WN MI GY  +G G+  L  FE MK  GL+P+  T + +L+AC+ 
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 223 AEAVEEGVFYFNIMGNEYGIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWD 282
              V++G  YF  M  +YG+ P  +HY  ++D+LG++G L +A   ++ MP  P A IW 
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 283 ALRNYARLHGNMELEDRAEELMFSLDPSTTATTTKPS--------------LPPR----- 342
            L   +R+HGN EL + A + +F+++P  +      S              L  R     
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 343 -RKQSSTNMLEEKDRVREFR---SAMPYKEEGEGKLKGLNGQMKEAGYVPDTRYVLHDID 402
            +K    + +E +++   F       P K+E    L+ L+ +MK+AGYV  T  VLHD++
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 403 EEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 459
           EE K++ ++YHSERLA+AYG++   +   +R+IKNLR+C DCHNAIK M++I GR +I+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

The following BLAST results are available for this feature:

BLAST of IVF0012749 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQE5	2.9e-116	51.69	Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidop...	[more]
Q9SUH6	1.6e-77	35.68	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
Q9LW63	3.9e-76	39.39	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
Q9LTF4	3.3e-75	40.37	Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th...	[more]
Q9SY02	9.5e-75	37.99	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]

BLAST of IVF0012749 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFT5	9.7e-264	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C9A6	8.2e-263	99.78	pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=36...	[more]
A0A5A7V2K9	4.5e-261	98.69	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0LEV9	4.5e-245	92.36	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G0005...	[more]
A0A6J1FC52	1.8e-217	83.66	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]

BLAST of IVF0012749 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10773.1	0.0	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008459269.1	0.0	99.78	PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis m...	[more]
KAA0061500.1	0.0	98.69	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_004141167.1	7.09e-311	92.36	pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Cucumis sa...	[more]
XP_038889181.1	8.07e-301	89.30	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benin...	[more]

BLAST of IVF0012749 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15690.1	2.1e-117	51.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30700.1	1.1e-78	35.68	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	2.7e-77	39.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G52630.1	2.3e-76	40.37	mitochondrial RNAediting factor 1	[more]
AT4G02750.1	6.8e-76	37.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 122..226 e-value: 1.4E-22 score: 81.9 coord: 227..307 e-value: 3.2E-6 score: 28.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 173..221 e-value: 1.3E-10 score: 41.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 249..272 e-value: 0.045 score: 14.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 177..209 e-value: 3.6E-7 score: 27.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 12.550746
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 338..448 e-value: 6.0E-34 score: 116.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..334
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 7..453
None	No IPR available	PANTHER	PTHR24015:SF1685	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 7..453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012749.2	IVF0012749.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding